Equivalence class NR_3.0_08417.3 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8RWG|1|A (rep) | Large subunit ribosomal RNA | 23S ribosomal RNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | PAO1 wild-type ribosome, R, reference map | Electron microscopy | 2.46 | 2805 | 2025-02-12 |
| 2 | 7UNW|1|A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Electron microscopy | 2.6 | 2884 | 2022-06-22 |
| 3 | 7UNV|1|A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Electron microscopy | 2.7 | 2884 | 2022-06-22 |
| 4 | 6SPB|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Pseudomonas aeruginosa | Bacteria | RF02541 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6 | Electron microscopy | 2.82 | 2885 | 2019-10-16 |
| 5 | 7UNU|1|A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Electron microscopy | 2.9 | 2884 | 2022-06-22 |
| 6 | 7UNR|1|A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Electron microscopy | 2.9 | 2884 | 2022-06-22 |
| 7 | 6SPF|1|A | Large subunit ribosomal RNA | Pseudomonas aeruginosa strain PAO1 23S ribosomal RNA | Pseudomonas aeruginosa | Bacteria | RF02541 | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | Electron microscopy | 2.89 | 2885 | 2019-10-23 |
| 8 | 8CD1|1|A | Large subunit ribosomal RNA | 23S rRNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | 70S-PHIKZ014 | Electron microscopy | 3 | 2883 | 2024-01-24 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 7UNV|1|A | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | ELECTRON MICROSCOPY | 2.7 | 2884 | |
| 2 | 8CD1|1|A | 70S-PHIKZ014 | ELECTRON MICROSCOPY | 3 | 2883 | |
| 3 | 7UNR|1|A | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | ELECTRON MICROSCOPY | 2.9 | 2884 | |
| 4 | 7UNW|1|A | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | ELECTRON MICROSCOPY | 2.6 | 2884 | |
| 5 | 7UNU|1|A | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | ELECTRON MICROSCOPY | 2.9 | 2884 | |
| 6 | 8RWG|1|A | PAO1 wild-type ribosome, R, reference map | ELECTRON MICROSCOPY | 2.46 | 2805 | |
| 7 | 6SPB|1|A | Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6 | ELECTRON MICROSCOPY | 2.82 | 2885 | |
| 8 | 6SPF|1|A | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | ELECTRON MICROSCOPY | 2.89 | 2885 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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