RNA 3D Hub //

Equivalence class NR_3.0_08446.1 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
17M2T|1|p+ 7M2T|1|ss+ 7M2T|1|a+ 7M2T|1|dd (rep)RNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71372021-12-15
27M2T|1|nn+ 7M2T|1|V+ 7M2T|1|WWRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71302021-12-15
37M2T|1|7RNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71222021-12-15
47M2T|1|j+ 7M2T|1|URNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
57M2T|1|l+ 7M2T|1|WRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
67M2T|1|mm+ 7M2T|1|VVRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
77M2T|1|o+ 7M2T|1|ZRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
87M2T|1|oo+ 7M2T|1|YYRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
97M2T|1|q+ 7M2T|1|bRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
107M2T|1|r+ 7M2T|1|cRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
117M2T|1|rr+ 7M2T|1|ccRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
127M2T|1|s+ 7M2T|1|dRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
137M2T|1|tt+ 7M2T|1|eeRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
147M2T|1|uu+ 7M2T|1|ffRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
157M2T|1|vv+ 7M2T|1|ggRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
167M2T|1|e+ 7M2T|1|PRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
177M2T|1|g+ 7M2T|1|RRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
187M2T|1|h+ 7M2T|1|SRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
197M2T|1|hh+ 7M2T|1|QQRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
207M2T|1|i+ 7M2T|1|TRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
217M2T|1|jj+ 7M2T|1|SSRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
227M2T|1|kk+ 7M2T|1|TTRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
237M2T|1|ll+ 7M2T|1|UURNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
247M2T|1|m+ 7M2T|1|XRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
257M2T|1|n+ 7M2T|1|YRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
267M2T|1|pp+ 7M2T|1|ZZRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
277M2T|1|qq+ 7M2T|1|bbRNA (27-mer), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71202021-12-15
287M2T|1|kRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.71102021-12-15
297M2T|1|1RNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
307M2T|1|2RNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
317M2T|1|3RNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
327M2T|1|4RNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
337M2T|1|5RNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
347M2T|1|6RNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
357M2T|1|8RNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
367M2T|1|tRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
377M2T|1|uRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
387M2T|1|vRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
397M2T|1|wRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
407M2T|1|wwRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
417M2T|1|xRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
427M2T|1|xxRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
437M2T|1|yRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
447M2T|1|yyRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
457M2T|1|zRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15
467M2T|1|zzRNA (27-mer)Satellite tobacco mosaic virusCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-ray diffraction2.7122021-12-15

Release history

Release3.3783.3793.3803.3813.3823.3833.3843.3853.3863.3873.3883.3893.3903.3913.392
Date2025-03-132025-03-192025-03-262025-04-022025-04-092025-04-162025-04-232025-04-302025-05-072025-05-142025-05-212025-05-282025-06-042025-06-112025-06-18

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
17M2T|1|p+ 7M2T|1|ss+ 7M2T|1|a+ 7M2T|1|ddCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7137
27M2T|1|kCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7110
37M2T|1|nn+ 7M2T|1|V+ 7M2T|1|WWCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7130
47M2T|1|g+ 7M2T|1|RCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
57M2T|1|m+ 7M2T|1|XCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
67M2T|1|pp+ 7M2T|1|ZZCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
77M2T|1|jj+ 7M2T|1|SSCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
87M2T|1|n+ 7M2T|1|YCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
97M2T|1|h+ 7M2T|1|SCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
107M2T|1|kk+ 7M2T|1|TTCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
117M2T|1|qq+ 7M2T|1|bbCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
127M2T|1|hh+ 7M2T|1|QQCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
137M2T|1|e+ 7M2T|1|PCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
147M2T|1|j+ 7M2T|1|UCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
157M2T|1|l+ 7M2T|1|WCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
167M2T|1|oo+ 7M2T|1|YYCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
177M2T|1|o+ 7M2T|1|ZCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
187M2T|1|uu+ 7M2T|1|ffCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
197M2T|1|r+ 7M2T|1|cCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
207M2T|1|rr+ 7M2T|1|ccCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
217M2T|1|mm+ 7M2T|1|VVCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
227M2T|1|vv+ 7M2T|1|ggCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
237M2T|1|s+ 7M2T|1|dCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
247M2T|1|tt+ 7M2T|1|eeCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
257M2T|1|q+ 7M2T|1|bCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
267M2T|1|ll+ 7M2T|1|UUCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
277M2T|1|i+ 7M2T|1|TCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7120
287M2T|1|7Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.7122
297M2T|1|8Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
307M2T|1|2Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
317M2T|1|3Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
327M2T|1|1Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
337M2T|1|yyCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
347M2T|1|4Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
357M2T|1|zCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
367M2T|1|vCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
377M2T|1|zzCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
387M2T|1|yCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
397M2T|1|wwCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
407M2T|1|5Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
417M2T|1|xxCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
427M2T|1|xCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
437M2T|1|wCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
447M2T|1|6Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
457M2T|1|uCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712
467M2T|1|tCrystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic VirusX-RAY DIFFRACTION2.712

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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