#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15DQK|1|A (rep)RNA (48-MER)synthetic constructTwo divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mg2+X-ray diffraction2.712015-10-07
25DH6|1|Ahammerhead ribozymesynthetic constructTwo divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-G12A mutant in Mg2+X-ray diffraction2.782015-10-07
35DI2|1|ARNA (48-MER)synthetic constructTwo divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mn2+ at high pHX-ray diffraction2.992015-10-07
45DI4|1|ARNA (48-MER)synthetic constructTwo divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mn2+ at low pHX-ray diffraction2.952015-10-07

Release history

Release2.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.63
Date2015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-19

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
15DI4|1|ATwo divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mn2+ at low pHX-RAY DIFFRACTION2.9548
25DQK|1|ATwo divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mg2+X-RAY DIFFRACTION2.7148
35DI2|1|ATwo divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mn2+ at high pHX-RAY DIFFRACTION2.9948
45DH6|1|ATwo divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-G12A mutant in Mg2+X-RAY DIFFRACTION2.7848

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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