NR_3.0_10157.139

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	5J7L\|1\|DB (rep)	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	120	2016-07-27
2	4YBB\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	120	2015-03-18
3	6I7V\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	119	2018-12-05
4	4WOI\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	119	2015-08-05
5	5J91\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	120	2016-07-06
6	4U27\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	119	2014-07-30
7	4WOI\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	118	2015-08-05
8	4V9D\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	119	2014-07-09
9	4V9P\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
10	4V9P\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
11	4U24\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	119	2014-07-30
12	4V9O\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
13	4U26\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	119	2014-07-30
14	4V9P\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
15	4V9O\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
16	4U25\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	119	2014-07-30
17	4V9O\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
18	4V9P\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
19	4U1U\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	119	2014-07-30
20	4U20\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	119	2014-07-30
21	4U1V\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	119	2014-07-30
22	5J7L\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	118	2016-07-27
23	4V9D\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	118	2014-07-09
24	6I7V\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	118	2018-12-05
25	4V9O\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
26	4U27\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	118	2014-07-30
27	4U25\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	118	2014-07-30
28	4U1V\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	118	2014-07-30
29	4YBB\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	118	2015-03-18
30	4U26\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	118	2014-07-30
31	4U1U\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	118	2014-07-30
32	4U20\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	118	2014-07-30
33	4U24\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	118	2014-07-30
34	5J91\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	118	2016-07-06
35	5J5B\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	120	2016-07-27
36	5J5B\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	118	2016-07-27
37	8B0X\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli B	Bacteria	RF00001	Translating 70S ribosome in the unrotated state (P and E, tRNAs)	Electron microscopy	1.55	119	2022-11-30
38	8CEU\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Retapamulin and Capreomycin bound to the 50S subunit	Electron microscopy	1.83	119	2023-07-26
39	8FTO\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome with an improved MS2 tag inserted in H98	Electron microscopy	1.85	119	2023-08-02
40	8AYE\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome bound to thermorubin and fMet-tRNA	Electron microscopy	1.96	119	2023-03-01
41	7K00\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	Electron microscopy	1.98	119	2020-09-23
42	8CGD\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Clindamycin bound to the 50S subunit	Electron microscopy	1.98	119	2023-07-26
43	8QOA\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Structure of SecM-stalled Escherichia coli 70S ribosome	Electron microscopy	2	119	2024-03-20
44	8BIL\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.	Electron microscopy	2.04	120	2023-08-16
45	8G6W\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe	Electron microscopy	2.02	119	2023-04-05
46	8BIM\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site	Electron microscopy	2.04	120	2023-08-16
47	8E30\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin A analog 3142	Electron microscopy	1.91	118	2023-06-28
48	8G6Y\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe	Electron microscopy	2.09	119	2023-04-05
49	8E3O\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to solithromycin and VM1	Electron microscopy	1.99	118	2023-06-28
50	8EMM\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates	Electron microscopy	2.1	119	2023-05-31
51	8ANA\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit	Electron microscopy	2.1	119	2023-03-08
52	8BGE\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.11	120	2023-08-16
53	8E49\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC31	Electron microscopy	2.05	118	2023-06-28
54	6XZ7\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	Electron microscopy	2.1	120	2020-07-22
55	7QQ3\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.	Electron microscopy	2.1	118	2023-01-18
56	8E43\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin A analog 3336	Electron microscopy	2.09	118	2023-06-28
57	8BHL\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.21	120	2023-08-16
58	8R6C\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.	Electron microscopy	2.2	119	2024-07-24
59	8E41\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to tiamulin and VS1	Electron microscopy	2.13	118	2023-06-28
60	8QBT\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	E. coli ApdP-stalled ribosomal complex	Electron microscopy	2.2	118	2024-03-20
61	7ZP8\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with a stalled filamin domain 5 nascent chain	Electron microscopy	2.2	118	2022-08-10
62	8EIU\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome with A-loop mutations U2554C and U2555C	Electron microscopy	2.24	119	2023-02-01
63	8E33\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin analog SAB001	Electron microscopy	2.23	118	2023-06-28
64	7LVK\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cfr-modified 50S subunit from Escherichia coli	Electron microscopy	2.2	118	2021-12-15
65	6PJ6\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High resolution cryo-EM structure of E.coli 50S	Electron microscopy	2.2	118	2020-01-22
66	8BF7\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.33	120	2023-08-16
67	7N1P\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	Electron microscopy	2.33	120	2021-07-14
68	8AKN\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome	Electron microscopy	2.3	119	2023-03-08
69	8G6X\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe	Electron microscopy	2.31	119	2023-03-22
70	7PJS\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	Electron microscopy	2.35	120	2021-10-20
71	8HSP\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state	Electron microscopy	2.32	119	2024-04-03
72	7Z20\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain	Electron microscopy	2.29	118	2022-08-10
73	7Y7G\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)	Electron microscopy	2.34	119	2023-10-25
74	8BHP\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.37	120	2023-08-16
75	7O1A\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.4	120	2021-09-01
76	8E3M\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to L-linker solithromycin conjugate	Electron microscopy	2.25	118	2023-06-28
77	8E45\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC17	Electron microscopy	2.3	118	2023-06-28
78	7S1H\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Wild-type Escherichia coli ribosome with antibiotic linezolid	Electron microscopy	2.35	118	2021-11-17
79	8E32\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1	Electron microscopy	2.35	118	2023-06-28
80	8R8M\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.	Electron microscopy	2.4	119	2024-07-24
81	9FBV\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	70S Escherichia coli ribosome with P-site initiatior tRNA.	Electron microscopy	2.4	119	2024-06-26
82	8HTZ\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state	Electron microscopy	2.4	119	2024-04-03
83	8E46\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC21	Electron microscopy	2.32	118	2023-06-28
84	8RQ2\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III	Electron microscopy	2.44	120	2024-05-22
85	8RQ0\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II	Electron microscopy	2.44	120	2024-05-22
86	8RPZ\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I	Electron microscopy	2.44	120	2024-05-22
87	8E3L\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to D-linker solithromycin conjugate	Electron microscopy	2.35	118	2023-06-28
88	7Y7E\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	Electron microscopy	2.41	119	2023-10-25
89	8E48\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC30	Electron microscopy	2.27	118	2023-06-28
90	8IFB\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Dibekacin-bound E.coli 70S ribosome in the PURE system	Electron microscopy	2.43	119	2024-02-14
91	7Y7F\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)	Electron microscopy	2.43	119	2023-10-25
92	8E42\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to tiamulin and azithromycin	Electron microscopy	2.29	118	2023-06-28
93	8E35\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound SAB002	Electron microscopy	2.27	118	2023-06-28
94	7S1K\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid	Electron microscopy	2.42	118	2022-01-19
95	7BL4\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	Electron microscopy	2.4	119	2021-05-12
96	8E47\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC26	Electron microscopy	2.32	118	2023-06-28
97	7N2U\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	Electron microscopy	2.53	120	2021-07-14
98	7S1J\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Wild-type Escherichia coli ribosome with antibiotic radezolid	Electron microscopy	2.47	118	2022-03-02
99	8W51\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of YchF(H114A) on E.coli 50S ribosomal subunit	Electron microscopy	2.4	118	2024-08-28
100	7N2V\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	Electron microscopy	2.54	120	2021-07-14
101	7Y7C\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)	Electron microscopy	2.51	119	2023-10-25
102	7Y7H\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)	Electron microscopy	2.51	119	2023-10-25
103	7S1G\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	wild-type Escherichia coli stalled ribosome with antibiotic linezolid	Electron microscopy	2.48	118	2021-11-17
104	7S1I\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid	Electron microscopy	2.48	118	2022-03-02
105	7SA4\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.55	120	2022-08-03
106	8E36\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin A analog 3146	Electron microscopy	2.38	118	2023-06-28
107	7UG7\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	Electron microscopy	2.58	120	2022-05-18
108	7YLA\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of 50S-HflX complex	Electron microscopy	2.52	118	2023-01-04
109	6XZB\|1\|B2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.54	120	2020-11-04
110	6YSS\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	Electron microscopy	2.6	120	2020-08-19
111	7Y7D\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	Electron microscopy	2.58	119	2023-10-25
112	6PC6\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 47	Electron microscopy	2.5	118	2020-06-17
113	8BH4\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.62	120	2023-08-16
114	8E44\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC09	Electron microscopy	2.53	118	2023-06-28
115	7ZOD\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia	Electron microscopy	2.56	118	2022-08-10
116	8J1Z\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	The global structure of pre50S related to DbpA in state3	Electron microscopy	2.6	119	2024-04-24
117	6PCR\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40o	Electron microscopy	2.5	118	2020-06-17
118	6PC7\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 46	Electron microscopy	2.5	118	2020-06-17
119	6YS3\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.58	118	2020-09-30
120	7O1C\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	Electron microscopy	2.6	120	2021-09-01
121	7N30\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	Electron microscopy	2.66	120	2021-07-14
122	7NWT\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	Electron microscopy	2.66	120	2021-12-15
123	7N31\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a post-translocation (POST) conformation	Electron microscopy	2.69	120	2021-07-14
124	7ZTA\|1\|05S1	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide	Electron microscopy	2.7	120	2023-04-12
125	6TBV\|1\|05S1	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	Electron microscopy	2.7	120	2020-01-01
126	6TC3\|1\|05S1	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	Electron microscopy	2.7	120	2020-01-01
127	8EKC\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA	Electron microscopy	2.7	120	2022-12-07
128	6XZA\|1\|B2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.66	120	2020-11-04
129	8RPY\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137	Electron microscopy	2.64	120	2024-05-22
130	7N2C\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	Electron microscopy	2.72	120	2021-07-14
131	8HU1\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state	Electron microscopy	2.69	119	2024-04-03
132	6PCQ\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to VM2	Electron microscopy	2.6	118	2020-06-17
133	7ZQ5\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with truncated uL23 and uL24 loops	Electron microscopy	2.7	118	2022-08-10
134	6PC5\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compounds 46 and VS1	Electron microscopy	2.7	118	2020-06-17
135	7M5D\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)	Electron microscopy	2.8	120	2022-10-19
136	8G7R\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)	Electron microscopy	2.8	120	2024-03-06
137	8P18\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UGG (Structure III)	Electron microscopy	2.77	119	2024-05-22
138	8P16\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UGG (Structure I)	Electron microscopy	2.77	119	2024-05-22
139	8BHJ\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.81	120	2023-08-16
140	8P17\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UGG (Structure II)	Electron microscopy	2.78	119	2024-05-22
141	7ZQ6\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain	Electron microscopy	2.75	118	2022-08-10
142	8AM9\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome	Electron microscopy	2.8	119	2023-03-08
143	8BGH\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.88	120	2023-08-16
144	6QDW\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.83	118	2020-01-15
145	7NSO\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	Electron microscopy	2.9	120	2021-07-14
146	7ST2\|1\|2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	Electron microscopy	2.9	120	2022-02-23
147	7OT5\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	CspA-70 cotranslational folding intermediate 1	Electron microscopy	2.9	120	2022-01-19
148	8SYL\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs	Electron microscopy	2.9	120	2023-08-09
149	7B5K\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	Electron microscopy	2.9	120	2021-05-26
150	8G7P\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)	Electron microscopy	2.9	120	2024-03-06
151	8FZH\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)	Electron microscopy	2.9	120	2024-07-17
152	7OTC\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BL21(DE3)	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B	Electron microscopy	2.9	120	2022-05-11
153	6Y69\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	120	2020-07-01
154	8BHN\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.85	120	2023-08-16
155	5AFI\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	120	2015-03-11
156	7O19\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.9	120	2021-09-01
157	6ORE\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Release complex 70S	Electron microscopy	2.9	120	2019-06-19
158	7P3K\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)	Electron microscopy	2.9	119	2021-10-27
159	7OIZ\|1\|b	Small subunit ribosomal RNA fragment	16S rRNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	Electron microscopy	2.9	119	2021-09-15
160	8IFC\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Arbekacin-bound E.coli 70S ribosome in the PURE system	Electron microscopy	2.9	119	2024-02-14
161	6PCT\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 41q	Electron microscopy	2.8	118	2020-06-17
162	6WYV\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compounds 47 and VS1	Electron microscopy	2.75	118	2020-06-17
163	7TOS\|1\|5S	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20	Electron microscopy	2.9	120	2022-05-25
164	6U48\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	Electron microscopy	2.87	118	2019-09-18
165	5NWY\|1\|O	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	118	2017-07-19
166	5MDV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	120	2016-12-14
167	6ZU1\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	120	2020-09-16
168	6ZTO\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	120	2020-09-23
169	6ZTP\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	120	2020-09-16
170	7OII\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	CspA-70 cotranslational folding intermediate 2	Electron microscopy	3	120	2022-01-19
171	7OIF\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	CspA-27 cotranslational folding intermediate 2	Electron microscopy	3	120	2022-01-19
172	8FZE\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)	Electron microscopy	3	120	2024-07-17
173	8FZJ\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)	Electron microscopy	3	120	2024-07-17
174	7ST6\|1\|2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Pre translocation, non-rotated 70S ribosome (Structure I)	Electron microscopy	3	120	2022-02-23
175	6WDE\|1\|2	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	120	2020-07-01
176	6PCS\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40e	Electron microscopy	2.8	118	2020-06-17
177	6WD0\|1\|2	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	120	2020-07-01
178	6HRM\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S d2d8 stapled ribosome	Electron microscopy	2.96	120	2018-12-19
179	8AP4\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA	Electron microscopy	3	119	2022-11-16
180	6PC8\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40q	Electron microscopy	2.9	118	2020-06-17
181	6H4N\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	120	2018-09-05
182	7Q4K\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain	Electron microscopy	3	120	2022-11-16
183	8B7Y\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.	Electron microscopy	3	118	2023-01-25
184	6QUL\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	Electron microscopy	3	120	2019-04-10
185	6PCH\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 21	Electron microscopy	2.9	118	2020-06-17
186	5WFS\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	120	2018-05-02
187	8G2U\|1\|A	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms	Electron microscopy	3	117	2023-12-06
188	5WDT\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	120	2018-04-25
189	5IQR\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	118	2016-05-04
190	8CGV\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Tiamulin bound to the 50S subunit	Electron microscopy	1.66	56	2023-08-02
191	8CGK\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Lincomycin and Avilamycin bound to the 50S subunit	Electron microscopy	1.64	39	2023-07-19
192	8CAM\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Evernimicin bound to the 50S subunit	Electron microscopy	1.86	34	2023-07-26

Release history

Release	3.350	3.351	3.352
Date	2024-08-28	2024-09-04	2024-09-11

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	8E35\|1\|J	E. coli 50S ribosome bound to compound SAB002	ELECTRON MICROSCOPY	2.27	118
2	8E47\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC26	ELECTRON MICROSCOPY	2.32	118
3	8E48\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC30	ELECTRON MICROSCOPY	2.27	118
4	8E46\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC21	ELECTRON MICROSCOPY	2.32	118
5	8E45\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC17	ELECTRON MICROSCOPY	2.3	118
6	8BHJ\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.81	120
7	8BH4\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.62	120
8	8BHN\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.85	120
9	8BF7\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.33	120
10	8BGH\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.88	120
11	8BHL\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.21	120
12	8BGE\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.11	120
13	8BHP\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.37	120
14	8BIL\|1\|1	Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.	ELECTRON MICROSCOPY	2.04	120
15	8BIM\|1\|1	Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site	ELECTRON MICROSCOPY	2.04	120
16	8G7R\|1\|B	Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)	ELECTRON MICROSCOPY	2.8	120
17	8EKC\|1\|B	Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA	ELECTRON MICROSCOPY	2.7	120
18	8G7P\|1\|B	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)	ELECTRON MICROSCOPY	2.9	120
19	8FZH\|1\|B	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)	ELECTRON MICROSCOPY	2.9	120
20	8FZE\|1\|B	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)	ELECTRON MICROSCOPY	3	120
21	8FZJ\|1\|B	Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)	ELECTRON MICROSCOPY	3	120
22	8E3L\|1\|J	E. coli 50S ribosome bound to D-linker solithromycin conjugate	ELECTRON MICROSCOPY	2.35	118
23	8E32\|1\|J	E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1	ELECTRON MICROSCOPY	2.35	118
24	6HRM\|1\|3	E. coli 70S d2d8 stapled ribosome	ELECTRON MICROSCOPY	2.96	120
25	7NWT\|1\|3	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	ELECTRON MICROSCOPY	2.66	120
26	7Q4K\|1\|BB	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain	ELECTRON MICROSCOPY	3	120
27	6TBV\|1\|05S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	ELECTRON MICROSCOPY	2.7	120
28	6TC3\|1\|05S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	ELECTRON MICROSCOPY	2.7	120
29	7O1A\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.4	120
30	7O19\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.9	120
31	7O1C\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.6	120
32	7B5K\|1\|B	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	ELECTRON MICROSCOPY	2.9	120
33	7ZTA\|1\|05S1	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide	ELECTRON MICROSCOPY	2.7	120
34	7QQ3\|1\|J	Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.	ELECTRON MICROSCOPY	2.1	118
35	8E49\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC31	ELECTRON MICROSCOPY	2.05	118
36	8E42\|1\|J	E. coli 50S ribosome bound to tiamulin and azithromycin	ELECTRON MICROSCOPY	2.29	118
37	8E3M\|1\|J	E. coli 50S ribosome bound to L-linker solithromycin conjugate	ELECTRON MICROSCOPY	2.25	118
38	8CGK\|1\|b	Lincomycin and Avilamycin bound to the 50S subunit	ELECTRON MICROSCOPY	1.64	39
39	8CAM\|1\|b	Evernimicin bound to the 50S subunit	ELECTRON MICROSCOPY	1.86	34
40	8CGD\|1\|b	Clindamycin bound to the 50S subunit	ELECTRON MICROSCOPY	1.98	119
41	7N2U\|1\|5	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	ELECTRON MICROSCOPY	2.53	120
42	7N2V\|1\|5	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	ELECTRON MICROSCOPY	2.54	120
43	7N2C\|1\|5	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	ELECTRON MICROSCOPY	2.72	120
44	7N31\|1\|5	Elongating 70S ribosome complex in a post-translocation (POST) conformation	ELECTRON MICROSCOPY	2.69	120
45	7N1P\|1\|5	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	ELECTRON MICROSCOPY	2.33	120
46	7N30\|1\|5	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	ELECTRON MICROSCOPY	2.66	120
47	7UG7\|1\|5	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	ELECTRON MICROSCOPY	2.58	120
48	6XZ7\|1\|B	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	ELECTRON MICROSCOPY	2.1	120
49	6XZB\|1\|B2	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.54	120
50	6XZA\|1\|B2	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.66	120
51	6ZTO\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	120
52	6ZU1\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	120
53	6ZTP\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	120
54	8SYL\|1\|B	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs	ELECTRON MICROSCOPY	2.9	120
55	6QUL\|1\|B	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	ELECTRON MICROSCOPY	3	120
56	8AP4\|1\|b	Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA	ELECTRON MICROSCOPY	3	119
57	7OTC\|1\|B	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B	ELECTRON MICROSCOPY	2.9	120
58	8FTO\|1\|b	E. coli 70S ribosome with an improved MS2 tag inserted in H98	ELECTRON MICROSCOPY	1.85	119
59	8HTZ\|1\|b	E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state	ELECTRON MICROSCOPY	2.4	119
60	8HSP\|1\|b	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state	ELECTRON MICROSCOPY	2.32	119
61	8HU1\|1\|b	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state	ELECTRON MICROSCOPY	2.69	119
62	7Y7C\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.51	119
63	7Y7D\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.58	119
64	7Y7H\|1\|b	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)	ELECTRON MICROSCOPY	2.51	119
65	7Y7G\|1\|b	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)	ELECTRON MICROSCOPY	2.34	119
66	7Y7E\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.41	119
67	7Y7F\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)	ELECTRON MICROSCOPY	2.43	119
68	8B0X\|1\|b	Translating 70S ribosome in the unrotated state (P and E, tRNAs)	ELECTRON MICROSCOPY	1.55	119
69	7OIZ\|1\|b	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	ELECTRON MICROSCOPY	2.9	119
70	7P3K\|1\|b	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)	ELECTRON MICROSCOPY	2.9	119
71	8IFC\|1\|b	Arbekacin-bound E.coli 70S ribosome in the PURE system	ELECTRON MICROSCOPY	2.9	119
72	8IFB\|1\|b	Dibekacin-bound E.coli 70S ribosome in the PURE system	ELECTRON MICROSCOPY	2.43	119
73	8P16\|1\|3	E167K RF2 on E. coli 70S release complex with UGG (Structure I)	ELECTRON MICROSCOPY	2.77	119
74	8P18\|1\|3	E167K RF2 on E. coli 70S release complex with UGG (Structure III)	ELECTRON MICROSCOPY	2.77	119
75	8P17\|1\|3	E167K RF2 on E. coli 70S release complex with UGG (Structure II)	ELECTRON MICROSCOPY	2.78	119
76	8AYE\|1\|b	E. coli 70S ribosome bound to thermorubin and fMet-tRNA	ELECTRON MICROSCOPY	1.96	119
77	7K00\|1\|b	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	ELECTRON MICROSCOPY	1.98	119
78	8G6Y\|1\|b	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.09	119
79	8G6W\|1\|b	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.02	119
80	8G6X\|1\|b	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.31	119
81	8EIU\|1\|b	E. coli 70S ribosome with A-loop mutations U2554C and U2555C	ELECTRON MICROSCOPY	2.24	119
82	8EMM\|1\|b	Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates	ELECTRON MICROSCOPY	2.1	119
83	8ANA\|1\|b	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit	ELECTRON MICROSCOPY	2.1	119
84	8CGV\|1\|b	Tiamulin bound to the 50S subunit	ELECTRON MICROSCOPY	1.66	56
85	8AKN\|1\|b	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome	ELECTRON MICROSCOPY	2.3	119
86	8R6C\|1\|b	70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.	ELECTRON MICROSCOPY	2.2	119
87	9FBV\|1\|b	70S Escherichia coli ribosome with P-site initiatior tRNA.	ELECTRON MICROSCOPY	2.4	119
88	8CEU\|1\|b	Retapamulin and Capreomycin bound to the 50S subunit	ELECTRON MICROSCOPY	1.83	119
89	8R8M\|1\|b	70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.	ELECTRON MICROSCOPY	2.4	119
90	8AM9\|1\|b	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome	ELECTRON MICROSCOPY	2.8	119
91	8QOA\|1\|b	Structure of SecM-stalled Escherichia coli 70S ribosome	ELECTRON MICROSCOPY	2	119
92	7NSO\|1\|B	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	ELECTRON MICROSCOPY	2.9	120
93	5WDT\|1\|B	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	120
94	5WFS\|1\|B	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	120
95	5AFI\|1\|B	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	120
96	7ST2\|1\|2	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	ELECTRON MICROSCOPY	2.9	120
97	6Y69\|1\|B	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	120
98	6H4N\|1\|B	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	120
99	7ST6\|1\|2	Pre translocation, non-rotated 70S ribosome (Structure I)	ELECTRON MICROSCOPY	3	120
100	6WD0\|1\|2	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	120
101	6WDE\|1\|2	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	120
102	7TOS\|1\|5S	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20	ELECTRON MICROSCOPY	2.9	120
103	8RPZ\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I	ELECTRON MICROSCOPY	2.44	120
104	8RQ0\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II	ELECTRON MICROSCOPY	2.44	120
105	8RQ2\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III	ELECTRON MICROSCOPY	2.44	120
106	8RPY\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137	ELECTRON MICROSCOPY	2.64	120
107	6U48\|1\|CB	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	ELECTRON MICROSCOPY	2.87	118
108	6WYV\|1\|J	E. coli 50S ribosome bound to compounds 47 and VS1	ELECTRON MICROSCOPY	2.75	118
109	6PCH\|1\|J	E. coli 50S ribosome bound to compound 21	ELECTRON MICROSCOPY	2.9	118
110	6PCT\|1\|J	E. coli 50S ribosome bound to compound 41q	ELECTRON MICROSCOPY	2.8	118
111	6PC7\|1\|J	E. coli 50S ribosome bound to compound 46	ELECTRON MICROSCOPY	2.5	118
112	6PC6\|1\|J	E. coli 50S ribosome bound to compound 47	ELECTRON MICROSCOPY	2.5	118
113	6PCR\|1\|J	E. coli 50S ribosome bound to compound 40o	ELECTRON MICROSCOPY	2.5	118
114	6PCS\|1\|J	E. coli 50S ribosome bound to compound 40e	ELECTRON MICROSCOPY	2.8	118
115	8E3O\|1\|J	E. coli 50S ribosome bound to solithromycin and VM1	ELECTRON MICROSCOPY	1.99	118
116	6PCQ\|1\|J	E. coli 50S ribosome bound to VM2	ELECTRON MICROSCOPY	2.6	118
117	6PC8\|1\|J	E. coli 50S ribosome bound to compound 40q	ELECTRON MICROSCOPY	2.9	118
118	6PC5\|1\|J	E. coli 50S ribosome bound to compounds 46 and VS1	ELECTRON MICROSCOPY	2.7	118
119	8E43\|1\|J	E. coli 50S ribosome bound to compound streptogramin A analog 3336	ELECTRON MICROSCOPY	2.09	118
120	8E30\|1\|J	E. coli 50S ribosome bound to compound streptogramin A analog 3142	ELECTRON MICROSCOPY	1.91	118
121	8E33\|1\|J	E. coli 50S ribosome bound to compound streptogramin analog SAB001	ELECTRON MICROSCOPY	2.23	118
122	8E41\|1\|J	E. coli 50S ribosome bound to tiamulin and VS1	ELECTRON MICROSCOPY	2.13	118
123	8E44\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC09	ELECTRON MICROSCOPY	2.53	118
124	8E36\|1\|J	E. coli 50S ribosome bound to compound streptogramin A analog 3146	ELECTRON MICROSCOPY	2.38	118
125	7BL4\|1\|B	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	ELECTRON MICROSCOPY	2.4	119
126	7M5D\|1\|3	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)	ELECTRON MICROSCOPY	2.8	120
127	7YLA\|1\|J	Cryo-EM structure of 50S-HflX complex	ELECTRON MICROSCOPY	2.52	118
128	7S1J\|1\|J	Wild-type Escherichia coli ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.47	118
129	7S1K\|1\|J	Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.42	118
130	7S1H\|1\|J	Wild-type Escherichia coli ribosome with antibiotic linezolid	ELECTRON MICROSCOPY	2.35	118
131	7S1G\|1\|J	wild-type Escherichia coli stalled ribosome with antibiotic linezolid	ELECTRON MICROSCOPY	2.48	118
132	7S1I\|1\|J	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.48	118
133	7ZQ6\|1\|a	70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain	ELECTRON MICROSCOPY	2.75	118
134	7OIF\|1\|3	CspA-27 cotranslational folding intermediate 2	ELECTRON MICROSCOPY	3	120
135	7OT5\|1\|3	CspA-70 cotranslational folding intermediate 1	ELECTRON MICROSCOPY	2.9	120
136	7OII\|1\|3	CspA-70 cotranslational folding intermediate 2	ELECTRON MICROSCOPY	3	120
137	6ORE\|1\|3	Release complex 70S	ELECTRON MICROSCOPY	2.9	120
138	5NWY\|1\|O	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	118
139	5MDV\|1\|3	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	120
140	8QBT\|1\|B	E. coli ApdP-stalled ribosomal complex	ELECTRON MICROSCOPY	2.2	118
141	7PJS\|1\|B	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	ELECTRON MICROSCOPY	2.35	120
142	6YSS\|1\|B	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	ELECTRON MICROSCOPY	2.6	120
143	8J1Z\|1\|b	The global structure of pre50S related to DbpA in state3	ELECTRON MICROSCOPY	2.6	119
144	8W51\|1\|B	Structure of YchF(H114A) on E.coli 50S ribosomal subunit	ELECTRON MICROSCOPY	2.4	118
145	7SA4\|1\|4	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.55	120
146	5IQR\|1\|3	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	118
147	6PJ6\|1\|J	High resolution cryo-EM structure of E.coli 50S	ELECTRON MICROSCOPY	2.2	118
148	7LVK\|1\|J	Cfr-modified 50S subunit from Escherichia coli	ELECTRON MICROSCOPY	2.2	118
149	4V9P\|1\|EB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
150	4V9O\|1\|EB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
151	4V9D\|1\|DB	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	118
152	4U1U\|1\|DB	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	118
153	4U20\|1\|DB	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	118
154	4U1V\|1\|DB	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	118
155	4U27\|1\|DB	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	118
156	4U25\|1\|DB	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	118
157	4U26\|1\|DB	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	118
158	4U24\|1\|DB	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	118
159	6I7V\|1\|CB	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	118
160	4YBB\|1\|CB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	118
161	5J7L\|1\|CB	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	118
162	5J91\|1\|CB	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	118
163	5J5B\|1\|CB	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	118
164	6I7V\|1\|DB	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	119
165	5J7L\|1\|DB	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	120
166	5J91\|1\|DB	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	120
167	5J5B\|1\|DB	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	120
168	4YBB\|1\|DB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	120
169	4U26\|1\|BB	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	119
170	4U24\|1\|BB	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	119
171	4U25\|1\|BB	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	119
172	4U27\|1\|BB	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	119
173	4U1V\|1\|BB	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	119
174	4U20\|1\|BB	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	119
175	4U1U\|1\|BB	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	119
176	4V9D\|1\|CB	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	119
177	4WOI\|1\|BB	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	119
178	4V9O\|1\|AB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
179	4V9O\|1\|CB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
180	4V9P\|1\|CB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
181	4V9P\|1\|AB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
182	4WOI\|1\|CB	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	118
183	4V9P\|1\|GB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
184	4V9O\|1\|GB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
185	8B7Y\|1\|J	Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.	ELECTRON MICROSCOPY	3	118
186	7Z20\|1\|a	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain	ELECTRON MICROSCOPY	2.29	118
187	7ZQ5\|1\|a	70S E. coli ribosome with truncated uL23 and uL24 loops	ELECTRON MICROSCOPY	2.7	118
188	7ZP8\|1\|a	70S E. coli ribosome with a stalled filamin domain 5 nascent chain	ELECTRON MICROSCOPY	2.2	118
189	7ZOD\|1\|a	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia	ELECTRON MICROSCOPY	2.56	118
190	6QDW\|1\|a	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.83	118
191	6YS3\|1\|a	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.58	118
192	8G2U\|1\|A	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms	ELECTRON MICROSCOPY	3	117

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_10157.139 Obsolete

Release history

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