NR_3.0_10157.151

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	5J7L\|1\|DB (rep)	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	120	2016-07-27
2	4YBB\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	120	2015-03-18
3	6I7V\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	119	2018-12-05
4	4WOI\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	119	2015-08-05
5	5J91\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	120	2016-07-06
6	4U27\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	119	2014-07-30
7	4WOI\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	118	2015-08-05
8	4V9D\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	119	2014-07-09
9	4V9P\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
10	4V9P\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
11	4U24\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	119	2014-07-30
12	4V9O\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
13	4U26\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	119	2014-07-30
14	4V9P\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
15	4V9O\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
16	4U25\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	119	2014-07-30
17	4V9O\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
18	4V9P\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
19	4U1U\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	119	2014-07-30
20	4U20\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	119	2014-07-30
21	4U1V\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	119	2014-07-30
22	5J7L\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	118	2016-07-27
23	4V9D\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	118	2014-07-09
24	6I7V\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	118	2018-12-05
25	4V9O\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
26	4U27\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	118	2014-07-30
27	4U25\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	118	2014-07-30
28	4U1V\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	118	2014-07-30
29	4YBB\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	118	2015-03-18
30	4U26\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	118	2014-07-30
31	4U1U\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	118	2014-07-30
32	4U20\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	118	2014-07-30
33	4U24\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	118	2014-07-30
34	5J91\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	118	2016-07-06
35	5J5B\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	120	2016-07-27
36	5J5B\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	118	2016-07-27
37	8B0X\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli B	Bacteria	RF00001	Translating 70S ribosome in the unrotated state (P and E, tRNAs)	Electron microscopy	1.55	119	2022-11-30
38	8CEU\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Retapamulin and Capreomycin bound to the 50S subunit	Electron microscopy	1.83	119	2023-07-26
39	8FTO\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome with an improved MS2 tag inserted in H98	Electron microscopy	1.85	119	2023-08-02
40	9GHE\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)	Electron microscopy	1.87	119	2025-03-26
41	9D89\|1\|E	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)	Electron microscopy	1.95	119	2025-01-22
42	8AYE\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome bound to thermorubin and fMet-tRNA	Electron microscopy	1.96	119	2023-03-01
43	7K00\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	Electron microscopy	1.98	119	2020-09-23
44	8CGD\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Clindamycin bound to the 50S subunit	Electron microscopy	1.98	119	2023-07-26
45	8QOA\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Structure of SecM-stalled Escherichia coli 70S ribosome	Electron microscopy	2	119	2024-03-20
46	8BIL\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.	Electron microscopy	2.04	120	2023-08-16
47	8G6W\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe	Electron microscopy	2.02	119	2023-04-05
48	8BIM\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site	Electron microscopy	2.04	120	2023-08-16
49	8E30\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin A analog 3142	Electron microscopy	1.91	118	2023-06-28
50	8G6Y\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe	Electron microscopy	2.09	119	2023-04-05
51	8E3O\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to solithromycin and VM1	Electron microscopy	1.99	118	2023-06-28
52	8EMM\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates	Electron microscopy	2.1	119	2023-05-31
53	8ANA\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit	Electron microscopy	2.1	119	2023-03-08
54	8BGE\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.11	120	2023-08-16
55	8E49\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC31	Electron microscopy	2.05	118	2023-06-28
56	6XZ7\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	Electron microscopy	2.1	120	2020-07-22
57	7QQ3\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.	Electron microscopy	2.1	118	2023-01-18
58	9N2B\|1\|5	5S ribosomal RNA	5S ribosomal RNA (rRNA) from the B operon	Escherichia coli K-12	Bacteria	RF00001	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)	Electron microscopy	2.2	120	2025-03-19
59	8E43\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin A analog 3336	Electron microscopy	2.09	118	2023-06-28
60	8BHL\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.21	120	2023-08-16
61	8R6C\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.	Electron microscopy	2.2	119	2024-07-24
62	9GHB\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)	Electron microscopy	2.21	119	2025-03-26
63	8E41\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to tiamulin and VS1	Electron microscopy	2.13	118	2023-06-28
64	8QBT\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	E. coli ApdP-stalled ribosomal complex	Electron microscopy	2.2	118	2024-03-20
65	7ZP8\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with a stalled filamin domain 5 nascent chain	Electron microscopy	2.2	118	2022-08-10
66	8EIU\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome with A-loop mutations U2554C and U2555C	Electron microscopy	2.24	119	2023-02-01
67	9GHA\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)	Electron microscopy	2.24	119	2025-03-26
68	8YUO\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site	Electron microscopy	2.25	119	2024-11-06
69	8E33\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin analog SAB001	Electron microscopy	2.23	118	2023-06-28
70	7LVK\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cfr-modified 50S subunit from Escherichia coli	Electron microscopy	2.2	118	2021-12-15
71	6PJ6\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High resolution cryo-EM structure of E.coli 50S	Electron microscopy	2.2	118	2020-01-22
72	8BF7\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.33	120	2023-08-16
73	7N1P\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	Electron microscopy	2.33	120	2021-07-14
74	8AKN\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome	Electron microscopy	2.3	119	2023-03-08
75	8G6X\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe	Electron microscopy	2.31	119	2023-03-22
76	7PJS\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	Electron microscopy	2.35	120	2021-10-20
77	8HSP\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state	Electron microscopy	2.32	119	2024-04-03
78	7Z20\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain	Electron microscopy	2.29	118	2022-08-10
79	7Y7G\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)	Electron microscopy	2.34	119	2023-10-25
80	8BHP\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.37	120	2023-08-16
81	7O1A\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.4	120	2021-09-01
82	9N2C\|1\|5	5S ribosomal RNA	5S large subunit ribosomal RNA of the H operon	Escherichia coli K-12	Bacteria	RF00001	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)	Electron microscopy	2.4	120	2025-03-19
83	8E3M\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to L-linker solithromycin conjugate	Electron microscopy	2.25	118	2023-06-28
84	8E45\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC17	Electron microscopy	2.3	118	2023-06-28
85	7S1H\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Wild-type Escherichia coli ribosome with antibiotic linezolid	Electron microscopy	2.35	118	2021-11-17
86	8E32\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1	Electron microscopy	2.35	118	2023-06-28
87	8YUP\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA	Electron microscopy	2.39	119	2024-11-06
88	8R8M\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.	Electron microscopy	2.4	119	2024-07-24
89	9FBV\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	70S Escherichia coli ribosome with P-site initiatior tRNA.	Electron microscopy	2.4	119	2024-06-26
90	8HTZ\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state	Electron microscopy	2.4	119	2024-04-03
91	9GHF\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)	Electron microscopy	2.4	119	2025-03-26
92	8E46\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC21	Electron microscopy	2.32	118	2023-06-28
93	8RQ2\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III	Electron microscopy	2.44	120	2024-05-22
94	8RPZ\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I	Electron microscopy	2.44	120	2024-05-22
95	8RQ0\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II	Electron microscopy	2.44	120	2024-05-22
96	8E3L\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to D-linker solithromycin conjugate	Electron microscopy	2.35	118	2023-06-28
97	7Y7E\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	Electron microscopy	2.41	119	2023-10-25
98	8YUQ\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA	Electron microscopy	2.41	119	2024-11-06
99	9GHD\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)	Electron microscopy	2.41	119	2025-03-26
100	8E48\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC30	Electron microscopy	2.27	118	2023-06-28
101	8IFB\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Dibekacin-bound E.coli 70S ribosome in the PURE system	Electron microscopy	2.43	119	2024-02-14
102	7Y7F\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)	Electron microscopy	2.43	119	2023-10-25
103	8YUS\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA	Electron microscopy	2.43	119	2024-11-06
104	8E42\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to tiamulin and azithromycin	Electron microscopy	2.29	118	2023-06-28
105	8E35\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound SAB002	Electron microscopy	2.27	118	2023-06-28
106	7S1K\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid	Electron microscopy	2.42	118	2022-01-19
107	8YUR\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA	Electron microscopy	2.47	119	2024-11-06
108	7BL4\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	Electron microscopy	2.4	119	2021-05-12
109	8E47\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC26	Electron microscopy	2.32	118	2023-06-28
110	7N2U\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	Electron microscopy	2.53	120	2021-07-14
111	7S1J\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Wild-type Escherichia coli ribosome with antibiotic radezolid	Electron microscopy	2.47	118	2022-03-02
112	8W51\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of YchF(H114A) on E.coli 50S ribosomal subunit	Electron microscopy	2.4	118	2024-08-28
113	7N2V\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	Electron microscopy	2.54	120	2021-07-14
114	7Y7C\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)	Electron microscopy	2.51	119	2023-10-25
115	7Y7H\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)	Electron microscopy	2.51	119	2023-10-25
116	7S1G\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	wild-type Escherichia coli stalled ribosome with antibiotic linezolid	Electron microscopy	2.48	118	2021-11-17
117	7S1I\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid	Electron microscopy	2.48	118	2022-03-02
118	7SA4\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.55	120	2022-08-03
119	8E36\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin A analog 3146	Electron microscopy	2.38	118	2023-06-28
120	7UG7\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	Electron microscopy	2.58	120	2022-05-18
121	7YLA\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of 50S-HflX complex	Electron microscopy	2.52	118	2023-01-04
122	6XZB\|1\|B2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.54	120	2020-11-04
123	6YSS\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	Electron microscopy	2.6	120	2020-08-19
124	7Y7D\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	Electron microscopy	2.58	119	2023-10-25
125	6PC6\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 47	Electron microscopy	2.5	118	2020-06-17
126	8BH4\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.62	120	2023-08-16
127	8E44\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC09	Electron microscopy	2.53	118	2023-06-28
128	9CG5\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S initiation complex (tRNA-fMet M1 + UUG start codon)	Electron microscopy	2.59	119	2024-09-18
129	7ZOD\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia	Electron microscopy	2.56	118	2022-08-10
130	8J1Z\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	The global structure of pre50S related to DbpA in state3	Electron microscopy	2.6	119	2024-04-24
131	6PCR\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40o	Electron microscopy	2.5	118	2020-06-17
132	6PC7\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 46	Electron microscopy	2.5	118	2020-06-17
133	9CG6\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S initiation complex (tRNA-fMet M1 + GUG start codon)	Electron microscopy	2.61	119	2024-09-18
134	6YS3\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.58	118	2020-09-30
135	7O1C\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	Electron microscopy	2.6	120	2021-09-01
136	9MOR\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.65	120	2025-02-05
137	7N30\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	Electron microscopy	2.66	120	2021-07-14
138	7NWT\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	Electron microscopy	2.66	120	2021-12-15
139	9AX7\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S initiation complex (tRNA-fMet M1 + CUG start codon)	Electron microscopy	2.63	119	2024-09-18
140	9AX8\|1\|X	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)	Electron microscopy	2.6	118	2024-09-18
141	7N31\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a post-translocation (POST) conformation	Electron microscopy	2.69	120	2021-07-14
142	7ZTA\|1\|05S1	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide	Electron microscopy	2.7	120	2023-04-12
143	6TBV\|1\|05S1	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	Electron microscopy	2.7	120	2020-01-01
144	6TC3\|1\|05S1	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	Electron microscopy	2.7	120	2020-01-01
145	8EKC\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA	Electron microscopy	2.7	120	2022-12-07
146	6XZA\|1\|B2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.66	120	2020-11-04
147	8RPY\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137	Electron microscopy	2.64	120	2024-05-22
148	7N2C\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	Electron microscopy	2.72	120	2021-07-14
149	8HU1\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state	Electron microscopy	2.69	119	2024-04-03
150	6PCQ\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to VM2	Electron microscopy	2.6	118	2020-06-17
151	7ZQ5\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with truncated uL23 and uL24 loops	Electron microscopy	2.7	118	2022-08-10
152	9MQ4\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.78	120	2025-02-05
153	9CG7\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S initiation complex (tRNA-fMet M1 + AUG start codon)	Electron microscopy	2.75	119	2024-09-18
154	6PC5\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compounds 46 and VS1	Electron microscopy	2.7	118	2020-06-17
155	7M5D\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)	Electron microscopy	2.8	120	2022-10-19
156	8G7R\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)	Electron microscopy	2.8	120	2024-03-06
157	8P16\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UGG (Structure I)	Electron microscopy	2.77	119	2024-05-22
158	8P18\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UGG (Structure III)	Electron microscopy	2.77	119	2024-05-22
159	8QK7\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UAA	Electron microscopy	2.77	119	2024-09-25
160	8BHJ\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.81	120	2023-08-16
161	8P17\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UGG (Structure II)	Electron microscopy	2.78	119	2024-05-22
162	7ZQ6\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain	Electron microscopy	2.75	118	2022-08-10
163	9GHC\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)	Electron microscopy	2.79	119	2025-03-26
164	8AM9\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome	Electron microscopy	2.8	119	2023-03-08
165	8BGH\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.88	120	2023-08-16
166	6QDW\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.83	118	2020-01-15
167	7NSO\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	Electron microscopy	2.9	120	2021-07-14
168	7ST2\|1\|2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	Electron microscopy	2.9	120	2022-02-23
169	7OT5\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	CspA-70 cotranslational folding intermediate 1	Electron microscopy	2.9	120	2022-01-19
170	8SYL\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs	Electron microscopy	2.9	120	2023-08-09
171	7B5K\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	Electron microscopy	2.9	120	2021-05-26
172	8G7P\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)	Electron microscopy	2.9	120	2024-03-06
173	8FZH\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)	Electron microscopy	2.9	120	2024-07-17
174	7OTC\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BL21(DE3)	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B	Electron microscopy	2.9	120	2022-05-11
175	6Y69\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	120	2020-07-01
176	8BHN\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.85	120	2023-08-16
177	5AFI\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	120	2015-03-11
178	7O19\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.9	120	2021-09-01
179	6ORE\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Release complex 70S	Electron microscopy	2.9	120	2019-06-19
180	7OIZ\|1\|b	Small subunit ribosomal RNA fragment	16S rRNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	Electron microscopy	2.9	119	2021-09-15
181	7P3K\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)	Electron microscopy	2.9	119	2021-10-27
182	8IFC\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Arbekacin-bound E.coli 70S ribosome in the PURE system	Electron microscopy	2.9	119	2024-02-14
183	8ZTV\|1\|b	5S ribosomal RNA	5S rRMA	Escherichia coli	Bacteria	RF00001	70S ribosome arrested by PepNL with RF2	Electron microscopy	2.9	119	2025-03-19
184	8ZTU\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome arrested by PepNL	Electron microscopy	2.9	119	2025-03-19
185	6PCT\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 41q	Electron microscopy	2.8	118	2020-06-17
186	6WYV\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compounds 47 and VS1	Electron microscopy	2.75	118	2020-06-17
187	7TOS\|1\|5S	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20	Electron microscopy	2.9	120	2022-05-25
188	6U48\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	Electron microscopy	2.87	118	2019-09-18
189	5NWY\|1\|O	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	118	2017-07-19
190	5MDV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	120	2016-12-14
191	6ZTO\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	120	2020-09-23
192	6ZU1\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	120	2020-09-16
193	6ZTP\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	120	2020-09-16
194	7OII\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	CspA-70 cotranslational folding intermediate 2	Electron microscopy	3	120	2022-01-19
195	7OIF\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	CspA-27 cotranslational folding intermediate 2	Electron microscopy	3	120	2022-01-19
196	8FZE\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)	Electron microscopy	3	120	2024-07-17
197	8FZJ\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)	Electron microscopy	3	120	2024-07-17
198	7ST6\|1\|2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Pre translocation, non-rotated 70S ribosome (Structure I)	Electron microscopy	3	120	2022-02-23
199	6WDE\|1\|2	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	120	2020-07-01
200	6PCS\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40e	Electron microscopy	2.8	118	2020-06-17
201	6WD0\|1\|2	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	120	2020-07-01
202	6HRM\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S d2d8 stapled ribosome	Electron microscopy	2.96	120	2018-12-19
203	8AP4\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA	Electron microscopy	3	119	2022-11-16
204	6PC8\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40q	Electron microscopy	2.9	118	2020-06-17
205	6H4N\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	120	2018-09-05
206	7Q4K\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain	Electron microscopy	3	120	2022-11-16
207	8B7Y\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.	Electron microscopy	3	118	2023-01-25
208	6QUL\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	Electron microscopy	3	120	2019-04-10
209	6PCH\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 21	Electron microscopy	2.9	118	2020-06-17
210	5WFS\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	120	2018-05-02
211	8G2U\|1\|A	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms	Electron microscopy	3	117	2023-12-06
212	9H3Z\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	mature 50S subunit	Electron microscopy	2.98	120	2025-01-22
213	5WDT\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	120	2018-04-25
214	9NL5\|1\|R2	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation	Electron microscopy	3	119	2025-04-02
215	5IQR\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	118	2016-05-04
216	8CGV\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Tiamulin bound to the 50S subunit	Electron microscopy	1.66	56	2023-08-02
217	8CGK\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Lincomycin and Avilamycin bound to the 50S subunit	Electron microscopy	1.64	39	2023-07-19
218	8CAM\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Evernimicin bound to the 50S subunit	Electron microscopy	1.86	34	2023-07-26

Release history

Release	3.381	3.382	3.383	3.384	3.385	3.386
Date	2025-04-02	2025-04-09	2025-04-16	2025-04-23	2025-04-30	2025-05-07

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	6QDW\|1\|a	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.83	118
2	6YS3\|1\|a	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.58	118
3	7ZOD\|1\|a	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia	ELECTRON MICROSCOPY	2.56	118
4	7ZQ5\|1\|a	70S E. coli ribosome with truncated uL23 and uL24 loops	ELECTRON MICROSCOPY	2.7	118
5	7ZP8\|1\|a	70S E. coli ribosome with a stalled filamin domain 5 nascent chain	ELECTRON MICROSCOPY	2.2	118
6	8G2U\|1\|A	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms	ELECTRON MICROSCOPY	3	117
7	9MOR\|1\|4	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.65	120
8	8B7Y\|1\|J	Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.	ELECTRON MICROSCOPY	3	118
9	4V9O\|1\|GB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
10	4V9P\|1\|GB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
11	4WOI\|1\|CB	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	118
12	6I7V\|1\|CB	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	118
13	6YSS\|1\|B	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	ELECTRON MICROSCOPY	2.6	120
14	7PJS\|1\|B	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	ELECTRON MICROSCOPY	2.35	120
15	8J1Z\|1\|b	The global structure of pre50S related to DbpA in state3	ELECTRON MICROSCOPY	2.6	119
16	9MQ4\|1\|4	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.78	120
17	7SA4\|1\|4	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.55	120
18	5IQR\|1\|3	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	118
19	8W51\|1\|B	Structure of YchF(H114A) on E.coli 50S ribosomal subunit	ELECTRON MICROSCOPY	2.4	118
20	6PJ6\|1\|J	High resolution cryo-EM structure of E.coli 50S	ELECTRON MICROSCOPY	2.2	118
21	7LVK\|1\|J	Cfr-modified 50S subunit from Escherichia coli	ELECTRON MICROSCOPY	2.2	118
22	4U24\|1\|DB	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	118
23	4U26\|1\|DB	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	118
24	4U25\|1\|DB	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	118
25	4U27\|1\|DB	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	118
26	4U1V\|1\|DB	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	118
27	4U20\|1\|DB	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	118
28	4U1U\|1\|DB	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	118
29	4V9D\|1\|DB	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	118
30	4V9P\|1\|EB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
31	4V9O\|1\|EB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
32	4YBB\|1\|CB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	118
33	5J7L\|1\|CB	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	118
34	5J5B\|1\|CB	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	118
35	5J91\|1\|CB	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	118
36	6I7V\|1\|DB	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	119
37	5J7L\|1\|DB	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	120
38	5J5B\|1\|DB	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	120
39	5J91\|1\|DB	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	120
40	4YBB\|1\|DB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	120
41	4U26\|1\|BB	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	119
42	4U24\|1\|BB	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	119
43	4U25\|1\|BB	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	119
44	4U27\|1\|BB	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	119
45	4U1V\|1\|BB	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	119
46	4U1U\|1\|BB	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	119
47	4U20\|1\|BB	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	119
48	4V9D\|1\|CB	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	119
49	4WOI\|1\|BB	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	119
50	4V9O\|1\|AB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
51	4V9O\|1\|CB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
52	4V9P\|1\|CB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
53	4V9P\|1\|AB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
54	9D89\|1\|E	E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)	ELECTRON MICROSCOPY	1.95	119
55	6WYV\|1\|J	E. coli 50S ribosome bound to compounds 47 and VS1	ELECTRON MICROSCOPY	2.75	118
56	6U48\|1\|CB	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	ELECTRON MICROSCOPY	2.87	118
57	8E3M\|1\|J	E. coli 50S ribosome bound to L-linker solithromycin conjugate	ELECTRON MICROSCOPY	2.25	118
58	8E42\|1\|J	E. coli 50S ribosome bound to tiamulin and azithromycin	ELECTRON MICROSCOPY	2.29	118
59	8E36\|1\|J	E. coli 50S ribosome bound to compound streptogramin A analog 3146	ELECTRON MICROSCOPY	2.38	118
60	8E41\|1\|J	E. coli 50S ribosome bound to tiamulin and VS1	ELECTRON MICROSCOPY	2.13	118
61	8E33\|1\|J	E. coli 50S ribosome bound to compound streptogramin analog SAB001	ELECTRON MICROSCOPY	2.23	118
62	8E44\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC09	ELECTRON MICROSCOPY	2.53	118
63	8E30\|1\|J	E. coli 50S ribosome bound to compound streptogramin A analog 3142	ELECTRON MICROSCOPY	1.91	118
64	6PC8\|1\|J	E. coli 50S ribosome bound to compound 40q	ELECTRON MICROSCOPY	2.9	118
65	6PCQ\|1\|J	E. coli 50S ribosome bound to VM2	ELECTRON MICROSCOPY	2.6	118
66	6PCS\|1\|J	E. coli 50S ribosome bound to compound 40e	ELECTRON MICROSCOPY	2.8	118
67	8E3O\|1\|J	E. coli 50S ribosome bound to solithromycin and VM1	ELECTRON MICROSCOPY	1.99	118
68	6PC5\|1\|J	E. coli 50S ribosome bound to compounds 46 and VS1	ELECTRON MICROSCOPY	2.7	118
69	8E43\|1\|J	E. coli 50S ribosome bound to compound streptogramin A analog 3336	ELECTRON MICROSCOPY	2.09	118
70	6PCR\|1\|J	E. coli 50S ribosome bound to compound 40o	ELECTRON MICROSCOPY	2.5	118
71	6PC6\|1\|J	E. coli 50S ribosome bound to compound 47	ELECTRON MICROSCOPY	2.5	118
72	6PC7\|1\|J	E. coli 50S ribosome bound to compound 46	ELECTRON MICROSCOPY	2.5	118
73	6PCT\|1\|J	E. coli 50S ribosome bound to compound 41q	ELECTRON MICROSCOPY	2.8	118
74	6PCH\|1\|J	E. coli 50S ribosome bound to compound 21	ELECTRON MICROSCOPY	2.9	118
75	7BL4\|1\|B	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	ELECTRON MICROSCOPY	2.4	119
76	7YLA\|1\|J	Cryo-EM structure of 50S-HflX complex	ELECTRON MICROSCOPY	2.52	118
77	7M5D\|1\|3	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)	ELECTRON MICROSCOPY	2.8	120
78	7ZQ6\|1\|a	70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain	ELECTRON MICROSCOPY	2.75	118
79	7S1J\|1\|J	Wild-type Escherichia coli ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.47	118
80	7S1K\|1\|J	Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.42	118
81	7S1H\|1\|J	Wild-type Escherichia coli ribosome with antibiotic linezolid	ELECTRON MICROSCOPY	2.35	118
82	7S1G\|1\|J	wild-type Escherichia coli stalled ribosome with antibiotic linezolid	ELECTRON MICROSCOPY	2.48	118
83	7S1I\|1\|J	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.48	118
84	8QBT\|1\|B	E. coli ApdP-stalled ribosomal complex	ELECTRON MICROSCOPY	2.2	118
85	5MDV\|1\|3	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	120
86	6ORE\|1\|3	Release complex 70S	ELECTRON MICROSCOPY	2.9	120
87	7OII\|1\|3	CspA-70 cotranslational folding intermediate 2	ELECTRON MICROSCOPY	3	120
88	7OT5\|1\|3	CspA-70 cotranslational folding intermediate 1	ELECTRON MICROSCOPY	2.9	120
89	7OIF\|1\|3	CspA-27 cotranslational folding intermediate 2	ELECTRON MICROSCOPY	3	120
90	5NWY\|1\|O	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	118
91	6ZTP\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	120
92	6ZU1\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	120
93	6ZTO\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	120
94	6XZB\|1\|B2	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.54	120
95	6XZ7\|1\|B	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	ELECTRON MICROSCOPY	2.1	120
96	6XZA\|1\|B2	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.66	120
97	7UG7\|1\|5	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	ELECTRON MICROSCOPY	2.58	120
98	7N30\|1\|5	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	ELECTRON MICROSCOPY	2.66	120
99	6QUL\|1\|B	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	ELECTRON MICROSCOPY	3	120
100	8SYL\|1\|B	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs	ELECTRON MICROSCOPY	2.9	120
101	8QOA\|1\|b	Structure of SecM-stalled Escherichia coli 70S ribosome	ELECTRON MICROSCOPY	2	119
102	8R6C\|1\|b	70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.	ELECTRON MICROSCOPY	2.2	119
103	9FBV\|1\|b	70S Escherichia coli ribosome with P-site initiatior tRNA.	ELECTRON MICROSCOPY	2.4	119
104	8CEU\|1\|b	Retapamulin and Capreomycin bound to the 50S subunit	ELECTRON MICROSCOPY	1.83	119
105	8CGV\|1\|b	Tiamulin bound to the 50S subunit	ELECTRON MICROSCOPY	1.66	56
106	8AKN\|1\|b	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome	ELECTRON MICROSCOPY	2.3	119
107	8AM9\|1\|b	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome	ELECTRON MICROSCOPY	2.8	119
108	8ANA\|1\|b	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit	ELECTRON MICROSCOPY	2.1	119
109	8R8M\|1\|b	70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.	ELECTRON MICROSCOPY	2.4	119
110	8EMM\|1\|b	Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates	ELECTRON MICROSCOPY	2.1	119
111	7OTC\|1\|B	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B	ELECTRON MICROSCOPY	2.9	120
112	8AP4\|1\|b	Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA	ELECTRON MICROSCOPY	3	119
113	8YUR\|1\|b	E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA	ELECTRON MICROSCOPY	2.47	119
114	8YUS\|1\|b	E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA	ELECTRON MICROSCOPY	2.43	119
115	8HTZ\|1\|b	E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state	ELECTRON MICROSCOPY	2.4	119
116	8YUP\|1\|b	E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA	ELECTRON MICROSCOPY	2.39	119
117	8HSP\|1\|b	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state	ELECTRON MICROSCOPY	2.32	119
118	8YUO\|1\|b	E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site	ELECTRON MICROSCOPY	2.25	119
119	8HU1\|1\|b	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state	ELECTRON MICROSCOPY	2.69	119
120	8YUQ\|1\|b	E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA	ELECTRON MICROSCOPY	2.41	119
121	7Y7D\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.58	119
122	7Y7C\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.51	119
123	7Y7E\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.41	119
124	7Y7G\|1\|b	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)	ELECTRON MICROSCOPY	2.34	119
125	7Y7H\|1\|b	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)	ELECTRON MICROSCOPY	2.51	119
126	7Y7F\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)	ELECTRON MICROSCOPY	2.43	119
127	8B0X\|1\|b	Translating 70S ribosome in the unrotated state (P and E, tRNAs)	ELECTRON MICROSCOPY	1.55	119
128	7OIZ\|1\|b	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	ELECTRON MICROSCOPY	2.9	119
129	7P3K\|1\|b	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)	ELECTRON MICROSCOPY	2.9	119
130	8EIU\|1\|b	E. coli 70S ribosome with A-loop mutations U2554C and U2555C	ELECTRON MICROSCOPY	2.24	119
131	8G6X\|1\|b	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.31	119
132	8G6W\|1\|b	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.02	119
133	8IFC\|1\|b	Arbekacin-bound E.coli 70S ribosome in the PURE system	ELECTRON MICROSCOPY	2.9	119
134	8IFB\|1\|b	Dibekacin-bound E.coli 70S ribosome in the PURE system	ELECTRON MICROSCOPY	2.43	119
135	7K00\|1\|b	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	ELECTRON MICROSCOPY	1.98	119
136	8G6Y\|1\|b	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.09	119
137	9CG5\|1\|b	70S initiation complex (tRNA-fMet M1 + UUG start codon)	ELECTRON MICROSCOPY	2.59	119
138	9CG6\|1\|b	70S initiation complex (tRNA-fMet M1 + GUG start codon)	ELECTRON MICROSCOPY	2.61	119
139	9CG7\|1\|b	70S initiation complex (tRNA-fMet M1 + AUG start codon)	ELECTRON MICROSCOPY	2.75	119
140	9AX7\|1\|b	70S initiation complex (tRNA-fMet M1 + CUG start codon)	ELECTRON MICROSCOPY	2.63	119
141	8P16\|1\|3	E167K RF2 on E. coli 70S release complex with UGG (Structure I)	ELECTRON MICROSCOPY	2.77	119
142	8P18\|1\|3	E167K RF2 on E. coli 70S release complex with UGG (Structure III)	ELECTRON MICROSCOPY	2.77	119
143	8P17\|1\|3	E167K RF2 on E. coli 70S release complex with UGG (Structure II)	ELECTRON MICROSCOPY	2.78	119
144	8QK7\|1\|3	E167K RF2 on E. coli 70S release complex with UAA	ELECTRON MICROSCOPY	2.77	119
145	8AYE\|1\|b	E. coli 70S ribosome bound to thermorubin and fMet-tRNA	ELECTRON MICROSCOPY	1.96	119
146	8FTO\|1\|b	E. coli 70S ribosome with an improved MS2 tag inserted in H98	ELECTRON MICROSCOPY	1.85	119
147	9GHE\|1\|b	Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)	ELECTRON MICROSCOPY	1.87	119
148	9GHD\|1\|b	Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)	ELECTRON MICROSCOPY	2.41	119
149	9GHF\|1\|b	Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)	ELECTRON MICROSCOPY	2.4	119
150	9GHB\|1\|b	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)	ELECTRON MICROSCOPY	2.21	119
151	9GHC\|1\|b	Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)	ELECTRON MICROSCOPY	2.79	119
152	9GHA\|1\|b	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)	ELECTRON MICROSCOPY	2.24	119
153	7N2C\|1\|5	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	ELECTRON MICROSCOPY	2.72	120
154	7N2V\|1\|5	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	ELECTRON MICROSCOPY	2.54	120
155	7N2U\|1\|5	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	ELECTRON MICROSCOPY	2.53	120
156	8CGK\|1\|b	Lincomycin and Avilamycin bound to the 50S subunit	ELECTRON MICROSCOPY	1.64	39
157	8CAM\|1\|b	Evernimicin bound to the 50S subunit	ELECTRON MICROSCOPY	1.86	34
158	8CGD\|1\|b	Clindamycin bound to the 50S subunit	ELECTRON MICROSCOPY	1.98	119
159	9N2B\|1\|5	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)	ELECTRON MICROSCOPY	2.2	120
160	7N31\|1\|5	Elongating 70S ribosome complex in a post-translocation (POST) conformation	ELECTRON MICROSCOPY	2.69	120
161	7N1P\|1\|5	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	ELECTRON MICROSCOPY	2.33	120
162	9N2C\|1\|5	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)	ELECTRON MICROSCOPY	2.4	120
163	8ZTV\|1\|b	70S ribosome arrested by PepNL with RF2	ELECTRON MICROSCOPY	2.9	119
164	8ZTU\|1\|b	70S ribosome arrested by PepNL	ELECTRON MICROSCOPY	2.9	119
165	7Q4K\|1\|BB	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain	ELECTRON MICROSCOPY	3	120
166	7O1C\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.6	120
167	7O19\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.9	120
168	7O1A\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.4	120
169	6TC3\|1\|05S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	ELECTRON MICROSCOPY	2.7	120
170	6TBV\|1\|05S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	ELECTRON MICROSCOPY	2.7	120
171	7B5K\|1\|B	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	ELECTRON MICROSCOPY	2.9	120
172	7ZTA\|1\|05S1	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide	ELECTRON MICROSCOPY	2.7	120
173	7QQ3\|1\|J	Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.	ELECTRON MICROSCOPY	2.1	118
174	8E49\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC31	ELECTRON MICROSCOPY	2.05	118
175	9AX8\|1\|X	70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)	ELECTRON MICROSCOPY	2.6	118
176	6HRM\|1\|3	E. coli 70S d2d8 stapled ribosome	ELECTRON MICROSCOPY	2.96	120
177	7NWT\|1\|3	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	ELECTRON MICROSCOPY	2.66	120
178	7NSO\|1\|B	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	ELECTRON MICROSCOPY	2.9	120
179	5WDT\|1\|B	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	120
180	5AFI\|1\|B	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	120
181	5WFS\|1\|B	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	120
182	6H4N\|1\|B	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	120
183	6Y69\|1\|B	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	120
184	7ST2\|1\|2	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	ELECTRON MICROSCOPY	2.9	120
185	7ST6\|1\|2	Pre translocation, non-rotated 70S ribosome (Structure I)	ELECTRON MICROSCOPY	3	120
186	6WD0\|1\|2	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	120
187	6WDE\|1\|2	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	120
188	7TOS\|1\|5S	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20	ELECTRON MICROSCOPY	2.9	120
189	9H3Z\|1\|B	mature 50S subunit	ELECTRON MICROSCOPY	2.98	120
190	8RPZ\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I	ELECTRON MICROSCOPY	2.44	120
191	8RQ0\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II	ELECTRON MICROSCOPY	2.44	120
192	8RQ2\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III	ELECTRON MICROSCOPY	2.44	120
193	8RPY\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137	ELECTRON MICROSCOPY	2.64	120
194	9NL5\|1\|R2	E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation	ELECTRON MICROSCOPY	3	119
195	7Z20\|1\|a	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain	ELECTRON MICROSCOPY	2.29	118
196	8E46\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC21	ELECTRON MICROSCOPY	2.32	118
197	8E45\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC17	ELECTRON MICROSCOPY	2.3	118
198	8E32\|1\|J	E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1	ELECTRON MICROSCOPY	2.35	118
199	8E3L\|1\|J	E. coli 50S ribosome bound to D-linker solithromycin conjugate	ELECTRON MICROSCOPY	2.35	118
200	8FZJ\|1\|B	Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)	ELECTRON MICROSCOPY	3	120
201	8FZE\|1\|B	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)	ELECTRON MICROSCOPY	3	120
202	8FZH\|1\|B	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)	ELECTRON MICROSCOPY	2.9	120
203	8G7P\|1\|B	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)	ELECTRON MICROSCOPY	2.9	120
204	8EKC\|1\|B	Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA	ELECTRON MICROSCOPY	2.7	120
205	8G7R\|1\|B	Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)	ELECTRON MICROSCOPY	2.8	120
206	8BHP\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.37	120
207	8BIL\|1\|1	Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.	ELECTRON MICROSCOPY	2.04	120
208	8BIM\|1\|1	Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site	ELECTRON MICROSCOPY	2.04	120
209	8BGE\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.11	120
210	8BHL\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.21	120
211	8BGH\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.88	120
212	8BF7\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.33	120
213	8BHN\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.85	120
214	8BH4\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.62	120
215	8BHJ\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.81	120
216	8E48\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC30	ELECTRON MICROSCOPY	2.27	118
217	8E47\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC26	ELECTRON MICROSCOPY	2.32	118
218	8E35\|1\|J	E. coli 50S ribosome bound to compound SAB002	ELECTRON MICROSCOPY	2.27	118

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_10157.151 Obsolete

Release history

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