NR_3.0_10157.153

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	5J7L\|1\|DB (rep)	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	120	2016-07-27
2	4YBB\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	120	2015-03-18
3	6I7V\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	119	2018-12-05
4	4WOI\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	119	2015-08-05
5	5J91\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	120	2016-07-06
6	4U27\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	119	2014-07-30
7	4WOI\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	118	2015-08-05
8	4V9D\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	119	2014-07-09
9	4V9P\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
10	4V9P\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
11	4U24\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	119	2014-07-30
12	4V9O\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
13	4U26\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	119	2014-07-30
14	4V9P\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
15	4V9O\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
16	4U25\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	119	2014-07-30
17	4V9O\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
18	4V9P\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
19	4U1U\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	119	2014-07-30
20	4U20\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	119	2014-07-30
21	4U1V\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	119	2014-07-30
22	5J7L\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	118	2016-07-27
23	4V9D\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	118	2014-07-09
24	6I7V\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	118	2018-12-05
25	4V9O\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
26	4U27\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	118	2014-07-30
27	4U25\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	118	2014-07-30
28	4U1V\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	118	2014-07-30
29	4YBB\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	118	2015-03-18
30	4U26\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	118	2014-07-30
31	4U1U\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	118	2014-07-30
32	4U20\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	118	2014-07-30
33	4U24\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	118	2014-07-30
34	5J91\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	118	2016-07-06
35	5J5B\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	120	2016-07-27
36	5J5B\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	118	2016-07-27
37	9Q87\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli B	Bacteria	RF00001	Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+	Electron microscopy	1.55	120	2025-05-14
38	8B0X\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli B	Bacteria	RF00001	Translating 70S ribosome in the unrotated state (P and E, tRNAs)	Electron microscopy	1.55	119	2022-11-30
39	8CEU\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Retapamulin and Capreomycin bound to the 50S subunit	Electron microscopy	1.83	119	2023-07-26
40	8FTO\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome with an improved MS2 tag inserted in H98	Electron microscopy	1.85	119	2023-08-02
41	9GHE\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)	Electron microscopy	1.87	119	2025-03-26
42	9D89\|1\|E	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)	Electron microscopy	1.95	119	2025-01-22
43	8AYE\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome bound to thermorubin and fMet-tRNA	Electron microscopy	1.96	119	2023-03-01
44	7K00\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	Electron microscopy	1.98	119	2020-09-23
45	8CGD\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Clindamycin bound to the 50S subunit	Electron microscopy	1.98	119	2023-07-26
46	8QOA\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Structure of SecM-stalled Escherichia coli 70S ribosome	Electron microscopy	2	119	2024-03-20
47	8BIL\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.	Electron microscopy	2.04	120	2023-08-16
48	8G6W\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe	Electron microscopy	2.02	119	2023-04-05
49	8BIM\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site	Electron microscopy	2.04	120	2023-08-16
50	8E30\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin A analog 3142	Electron microscopy	1.91	118	2023-06-28
51	8G6Y\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe	Electron microscopy	2.09	119	2023-04-05
52	8E3O\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to solithromycin and VM1	Electron microscopy	1.99	118	2023-06-28
53	8EMM\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates	Electron microscopy	2.1	119	2023-05-31
54	8ANA\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit	Electron microscopy	2.1	119	2023-03-08
55	8BGE\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.11	120	2023-08-16
56	8E49\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC31	Electron microscopy	2.05	118	2023-06-28
57	6XZ7\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	Electron microscopy	2.1	120	2020-07-22
58	7QQ3\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.	Electron microscopy	2.1	118	2023-01-18
59	9N2B\|1\|5	5S ribosomal RNA	5S ribosomal RNA (rRNA) from the B operon	Escherichia coli K-12	Bacteria	RF00001	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)	Electron microscopy	2.2	120	2025-03-19
60	8E43\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin A analog 3336	Electron microscopy	2.09	118	2023-06-28
61	8BHL\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.21	120	2023-08-16
62	8R6C\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.	Electron microscopy	2.2	119	2024-07-24
63	9GHB\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)	Electron microscopy	2.21	119	2025-03-26
64	8E41\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to tiamulin and VS1	Electron microscopy	2.13	118	2023-06-28
65	8QBT\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	E. coli ApdP-stalled ribosomal complex	Electron microscopy	2.2	118	2024-03-20
66	7ZP8\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with a stalled filamin domain 5 nascent chain	Electron microscopy	2.2	118	2022-08-10
67	8EIU\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome with A-loop mutations U2554C and U2555C	Electron microscopy	2.24	119	2023-02-01
68	9GHA\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)	Electron microscopy	2.24	119	2025-03-26
69	8YUO\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site	Electron microscopy	2.25	119	2024-11-06
70	8E33\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin analog SAB001	Electron microscopy	2.23	118	2023-06-28
71	7LVK\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cfr-modified 50S subunit from Escherichia coli	Electron microscopy	2.2	118	2021-12-15
72	6PJ6\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High resolution cryo-EM structure of E.coli 50S	Electron microscopy	2.2	118	2020-01-22
73	8BF7\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.33	120	2023-08-16
74	7N1P\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	Electron microscopy	2.33	120	2021-07-14
75	8AKN\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome	Electron microscopy	2.3	119	2023-03-08
76	8G6X\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe	Electron microscopy	2.31	119	2023-03-22
77	7PJS\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	Electron microscopy	2.35	120	2021-10-20
78	8HSP\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state	Electron microscopy	2.32	119	2024-04-03
79	7Z20\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain	Electron microscopy	2.29	118	2022-08-10
80	7Y7G\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)	Electron microscopy	2.34	119	2023-10-25
81	8BHP\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.37	120	2023-08-16
82	7O1A\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.4	120	2021-09-01
83	9N2C\|1\|5	5S ribosomal RNA	5S large subunit ribosomal RNA of the H operon	Escherichia coli K-12	Bacteria	RF00001	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)	Electron microscopy	2.4	120	2025-03-19
84	8E3M\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to L-linker solithromycin conjugate	Electron microscopy	2.25	118	2023-06-28
85	8E45\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC17	Electron microscopy	2.3	118	2023-06-28
86	7S1H\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Wild-type Escherichia coli ribosome with antibiotic linezolid	Electron microscopy	2.35	118	2021-11-17
87	8E32\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1	Electron microscopy	2.35	118	2023-06-28
88	8YUP\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA	Electron microscopy	2.39	119	2024-11-06
89	8R8M\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.	Electron microscopy	2.4	119	2024-07-24
90	9FBV\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	70S Escherichia coli ribosome with P-site initiatior tRNA.	Electron microscopy	2.4	119	2024-06-26
91	8HTZ\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state	Electron microscopy	2.4	119	2024-04-03
92	9GHF\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)	Electron microscopy	2.4	119	2025-03-26
93	8E46\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC21	Electron microscopy	2.32	118	2023-06-28
94	8RQ0\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II	Electron microscopy	2.44	120	2024-05-22
95	8RPZ\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I	Electron microscopy	2.44	120	2024-05-22
96	8RQ2\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III	Electron microscopy	2.44	120	2024-05-22
97	8E3L\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to D-linker solithromycin conjugate	Electron microscopy	2.35	118	2023-06-28
98	7Y7E\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	Electron microscopy	2.41	119	2023-10-25
99	8YUQ\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA	Electron microscopy	2.41	119	2024-11-06
100	9GHD\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)	Electron microscopy	2.41	119	2025-03-26
101	8E48\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC30	Electron microscopy	2.27	118	2023-06-28
102	7Y7F\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)	Electron microscopy	2.43	119	2023-10-25
103	8IFB\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Dibekacin-bound E.coli 70S ribosome in the PURE system	Electron microscopy	2.43	119	2024-02-14
104	8YUS\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA	Electron microscopy	2.43	119	2024-11-06
105	8E42\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to tiamulin and azithromycin	Electron microscopy	2.29	118	2023-06-28
106	8E35\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound SAB002	Electron microscopy	2.27	118	2023-06-28
107	7S1K\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid	Electron microscopy	2.42	118	2022-01-19
108	8YUR\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA	Electron microscopy	2.47	119	2024-11-06
109	7BL4\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	Electron microscopy	2.4	119	2021-05-12
110	8E47\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC26	Electron microscopy	2.32	118	2023-06-28
111	7N2U\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	Electron microscopy	2.53	120	2021-07-14
112	7S1J\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Wild-type Escherichia coli ribosome with antibiotic radezolid	Electron microscopy	2.47	118	2022-03-02
113	8W51\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of YchF(H114A) on E.coli 50S ribosomal subunit	Electron microscopy	2.4	118	2024-08-28
114	7N2V\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	Electron microscopy	2.54	120	2021-07-14
115	7Y7C\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)	Electron microscopy	2.51	119	2023-10-25
116	7Y7H\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)	Electron microscopy	2.51	119	2023-10-25
117	7S1G\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	wild-type Escherichia coli stalled ribosome with antibiotic linezolid	Electron microscopy	2.48	118	2021-11-17
118	7S1I\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid	Electron microscopy	2.48	118	2022-03-02
119	7SA4\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.55	120	2022-08-03
120	8E36\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound streptogramin A analog 3146	Electron microscopy	2.38	118	2023-06-28
121	7UG7\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	Electron microscopy	2.58	120	2022-05-18
122	7YLA\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of 50S-HflX complex	Electron microscopy	2.52	118	2023-01-04
123	6XZB\|1\|B2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.54	120	2020-11-04
124	6YSS\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	Electron microscopy	2.6	120	2020-08-19
125	7Y7D\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	Electron microscopy	2.58	119	2023-10-25
126	6PC6\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 47	Electron microscopy	2.5	118	2020-06-17
127	9H0L\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome with cognate tRNASer3 bound to A-site AGC codon	Electron microscopy	2.49	119	2025-05-28
128	8BH4\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.62	120	2023-08-16
129	8E44\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to antibiotic analog SLC09	Electron microscopy	2.53	118	2023-06-28
130	9CG5\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S initiation complex (tRNA-fMet M1 + UUG start codon)	Electron microscopy	2.59	119	2024-09-18
131	7ZOD\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia	Electron microscopy	2.56	118	2022-08-10
132	8J1Z\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	The global structure of pre50S related to DbpA in state3	Electron microscopy	2.6	119	2024-04-24
133	6PCR\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40o	Electron microscopy	2.5	118	2020-06-17
134	6PC7\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 46	Electron microscopy	2.5	118	2020-06-17
135	9CG6\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S initiation complex (tRNA-fMet M1 + GUG start codon)	Electron microscopy	2.61	119	2024-09-18
136	6YS3\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.58	118	2020-09-30
137	7O1C\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	Electron microscopy	2.6	120	2021-09-01
138	9MOR\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.65	120	2025-02-05
139	7N30\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	Electron microscopy	2.66	120	2021-07-14
140	7NWT\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	Electron microscopy	2.66	120	2021-12-15
141	9AX7\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S initiation complex (tRNA-fMet M1 + CUG start codon)	Electron microscopy	2.63	119	2024-09-18
142	9AX8\|1\|X	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)	Electron microscopy	2.6	118	2024-09-18
143	7N31\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a post-translocation (POST) conformation	Electron microscopy	2.69	120	2021-07-14
144	9GXX\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codon	Electron microscopy	2.61	119	2025-05-28
145	7ZTA\|1\|05S1	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide	Electron microscopy	2.7	120	2023-04-12
146	6TBV\|1\|05S1	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	Electron microscopy	2.7	120	2020-01-01
147	6TC3\|1\|05S1	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	Electron microscopy	2.7	120	2020-01-01
148	8EKC\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA	Electron microscopy	2.7	120	2022-12-07
149	6XZA\|1\|B2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.66	120	2020-11-04
150	8RPY\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137	Electron microscopy	2.64	120	2024-05-22
151	7N2C\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	Electron microscopy	2.72	120	2021-07-14
152	8HU1\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state	Electron microscopy	2.69	119	2024-04-03
153	6PCQ\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to VM2	Electron microscopy	2.6	118	2020-06-17
154	7ZQ5\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with truncated uL23 and uL24 loops	Electron microscopy	2.7	118	2022-08-10
155	9MQ4\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.78	120	2025-02-05
156	9CG7\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S initiation complex (tRNA-fMet M1 + AUG start codon)	Electron microscopy	2.75	119	2024-09-18
157	6PC5\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compounds 46 and VS1	Electron microscopy	2.7	118	2020-06-17
158	7M5D\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)	Electron microscopy	2.8	120	2022-10-19
159	8G7R\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)	Electron microscopy	2.8	120	2024-03-06
160	8P18\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UGG (Structure III)	Electron microscopy	2.77	119	2024-05-22
161	8P16\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UGG (Structure I)	Electron microscopy	2.77	119	2024-05-22
162	8QK7\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UAA	Electron microscopy	2.77	119	2024-09-25
163	8BHJ\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.81	120	2023-08-16
164	8P17\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E167K RF2 on E. coli 70S release complex with UGG (Structure II)	Electron microscopy	2.78	119	2024-05-22
165	7ZQ6\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain	Electron microscopy	2.75	118	2022-08-10
166	9GHC\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)	Electron microscopy	2.79	119	2025-03-26
167	8AM9\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00001	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome	Electron microscopy	2.8	119	2023-03-08
168	8BGH\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.88	120	2023-08-16
169	6QDW\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.83	118	2020-01-15
170	7NSO\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	Electron microscopy	2.9	120	2021-07-14
171	7ST2\|1\|2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	Electron microscopy	2.9	120	2022-02-23
172	7OT5\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	CspA-70 cotranslational folding intermediate 1	Electron microscopy	2.9	120	2022-01-19
173	8SYL\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs	Electron microscopy	2.9	120	2023-08-09
174	7B5K\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	Electron microscopy	2.9	120	2021-05-26
175	8G7P\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)	Electron microscopy	2.9	120	2024-03-06
176	8FZH\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)	Electron microscopy	2.9	120	2024-07-17
177	7OTC\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli BL21(DE3)	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B	Electron microscopy	2.9	120	2022-05-11
178	6Y69\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	120	2020-07-01
179	8BHN\|1\|1	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.85	120	2023-08-16
180	5AFI\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	120	2015-03-11
181	7O19\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.9	120	2021-09-01
182	6ORE\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Release complex 70S	Electron microscopy	2.9	120	2019-06-19
183	7OIZ\|1\|b	Small subunit ribosomal RNA fragment	16S rRNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	Electron microscopy	2.9	119	2021-09-15
184	7P3K\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)	Electron microscopy	2.9	119	2021-10-27
185	8IFC\|1\|b	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Arbekacin-bound E.coli 70S ribosome in the PURE system	Electron microscopy	2.9	119	2024-02-14
186	8ZTU\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome arrested by PepNL	Electron microscopy	2.9	119	2025-03-19
187	8ZTV\|1\|b	5S ribosomal RNA	5S rRMA	Escherichia coli	Bacteria	RF00001	70S ribosome arrested by PepNL with RF2	Electron microscopy	2.9	119	2025-03-19
188	6PCT\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 41q	Electron microscopy	2.8	118	2020-06-17
189	6WYV\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compounds 47 and VS1	Electron microscopy	2.75	118	2020-06-17
190	7TOS\|1\|5S	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20	Electron microscopy	2.9	120	2022-05-25
191	6U48\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	Electron microscopy	2.87	118	2019-09-18
192	5NWY\|1\|O	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	118	2017-07-19
193	5MDV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	120	2016-12-14
194	6ZTO\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	120	2020-09-23
195	6ZTP\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	120	2020-09-16
196	6ZU1\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	120	2020-09-16
197	7OII\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	CspA-70 cotranslational folding intermediate 2	Electron microscopy	3	120	2022-01-19
198	7OIF\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	CspA-27 cotranslational folding intermediate 2	Electron microscopy	3	120	2022-01-19
199	8FZJ\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)	Electron microscopy	3	120	2024-07-17
200	8FZE\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)	Electron microscopy	3	120	2024-07-17
201	7ST6\|1\|2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Pre translocation, non-rotated 70S ribosome (Structure I)	Electron microscopy	3	120	2022-02-23
202	6WDE\|1\|2	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	120	2020-07-01
203	6PCS\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40e	Electron microscopy	2.8	118	2020-06-17
204	6WD0\|1\|2	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	120	2020-07-01
205	6HRM\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S d2d8 stapled ribosome	Electron microscopy	2.96	120	2018-12-19
206	8AP4\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA	Electron microscopy	3	119	2022-11-16
207	6PC8\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40q	Electron microscopy	2.9	118	2020-06-17
208	6H4N\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	120	2018-09-05
209	7Q4K\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain	Electron microscopy	3	120	2022-11-16
210	8B7Y\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.	Electron microscopy	3	118	2023-01-25
211	6QUL\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	Electron microscopy	3	120	2019-04-10
212	6PCH\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 21	Electron microscopy	2.9	118	2020-06-17
213	5WFS\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	120	2018-05-02
214	8G2U\|1\|A	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms	Electron microscopy	3	117	2023-12-06
215	9H3Z\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	mature 50S subunit	Electron microscopy	2.98	120	2025-01-22
216	5WDT\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	120	2018-04-25
217	9NL5\|1\|R2	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation	Electron microscopy	3	119	2025-04-02
218	5IQR\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	118	2016-05-04
219	8CGV\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Tiamulin bound to the 50S subunit	Electron microscopy	1.66	56	2023-08-02
220	8CGK\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Lincomycin and Avilamycin bound to the 50S subunit	Electron microscopy	1.64	39	2023-07-19
221	8CAM\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli BW25113	Bacteria	RF00001	Evernimicin bound to the 50S subunit	Electron microscopy	1.86	34	2023-07-26

Release history

Release	3.389	3.390
Date	2025-05-28	2025-06-04

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	6QDW\|1\|a	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.83	118
2	6YS3\|1\|a	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.58	118
3	7ZOD\|1\|a	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia	ELECTRON MICROSCOPY	2.56	118
4	7ZQ5\|1\|a	70S E. coli ribosome with truncated uL23 and uL24 loops	ELECTRON MICROSCOPY	2.7	118
5	7ZP8\|1\|a	70S E. coli ribosome with a stalled filamin domain 5 nascent chain	ELECTRON MICROSCOPY	2.2	118
6	8G2U\|1\|A	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms	ELECTRON MICROSCOPY	3	117
7	9MOR\|1\|4	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.65	120
8	8B7Y\|1\|J	Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.	ELECTRON MICROSCOPY	3	118
9	4V9O\|1\|GB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
10	4V9P\|1\|GB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
11	4WOI\|1\|CB	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	118
12	6I7V\|1\|CB	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	118
13	4U26\|1\|DB	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	118
14	4U24\|1\|DB	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	118
15	4U25\|1\|DB	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	118
16	4U27\|1\|DB	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	118
17	4U1V\|1\|DB	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	118
18	4U20\|1\|DB	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	118
19	4U1U\|1\|DB	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	118
20	4V9D\|1\|DB	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	118
21	4YBB\|1\|CB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	118
22	5J91\|1\|CB	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	118
23	5J5B\|1\|CB	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	118
24	5J7L\|1\|CB	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	118
25	4V9O\|1\|EB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
26	4V9P\|1\|EB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
27	4V9P\|1\|AB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
28	4V9P\|1\|CB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
29	4V9O\|1\|CB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
30	4V9O\|1\|AB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
31	4WOI\|1\|BB	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	119
32	4V9D\|1\|CB	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	119
33	4U26\|1\|BB	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	119
34	4U24\|1\|BB	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	119
35	4U25\|1\|BB	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	119
36	4U27\|1\|BB	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	119
37	4U1U\|1\|BB	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	119
38	4U20\|1\|BB	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	119
39	4U1V\|1\|BB	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	119
40	5J7L\|1\|DB	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	120
41	5J91\|1\|DB	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	120
42	5J5B\|1\|DB	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	120
43	4YBB\|1\|DB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	120
44	6I7V\|1\|DB	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	119
45	7LVK\|1\|J	Cfr-modified 50S subunit from Escherichia coli	ELECTRON MICROSCOPY	2.2	118
46	6PJ6\|1\|J	High resolution cryo-EM structure of E.coli 50S	ELECTRON MICROSCOPY	2.2	118
47	9MQ4\|1\|4	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.78	120
48	7SA4\|1\|4	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.55	120
49	5IQR\|1\|3	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	118
50	8W51\|1\|B	Structure of YchF(H114A) on E.coli 50S ribosomal subunit	ELECTRON MICROSCOPY	2.4	118
51	8J1Z\|1\|b	The global structure of pre50S related to DbpA in state3	ELECTRON MICROSCOPY	2.6	119
52	7PJS\|1\|B	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	ELECTRON MICROSCOPY	2.35	120
53	6YSS\|1\|B	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	ELECTRON MICROSCOPY	2.6	120
54	8QOA\|1\|b	Structure of SecM-stalled Escherichia coli 70S ribosome	ELECTRON MICROSCOPY	2	119
55	8SYL\|1\|B	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs	ELECTRON MICROSCOPY	2.9	120
56	6ZTO\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	120
57	6ZU1\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	120
58	6ZTP\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	120
59	6XZB\|1\|B2	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.54	120
60	6XZA\|1\|B2	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.66	120
61	6XZ7\|1\|B	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	ELECTRON MICROSCOPY	2.1	120
62	6QUL\|1\|B	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	ELECTRON MICROSCOPY	3	120
63	7UG7\|1\|5	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	ELECTRON MICROSCOPY	2.58	120
64	7N30\|1\|5	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	ELECTRON MICROSCOPY	2.66	120
65	7N1P\|1\|5	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	ELECTRON MICROSCOPY	2.33	120
66	7N31\|1\|5	Elongating 70S ribosome complex in a post-translocation (POST) conformation	ELECTRON MICROSCOPY	2.69	120
67	7N2C\|1\|5	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	ELECTRON MICROSCOPY	2.72	120
68	9N2B\|1\|5	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)	ELECTRON MICROSCOPY	2.2	120
69	7N2V\|1\|5	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	ELECTRON MICROSCOPY	2.54	120
70	7N2U\|1\|5	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	ELECTRON MICROSCOPY	2.53	120
71	8CGK\|1\|b	Lincomycin and Avilamycin bound to the 50S subunit	ELECTRON MICROSCOPY	1.64	39
72	8CAM\|1\|b	Evernimicin bound to the 50S subunit	ELECTRON MICROSCOPY	1.86	34
73	8CGD\|1\|b	Clindamycin bound to the 50S subunit	ELECTRON MICROSCOPY	1.98	119
74	8R8M\|1\|b	70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.	ELECTRON MICROSCOPY	2.4	119
75	8CEU\|1\|b	Retapamulin and Capreomycin bound to the 50S subunit	ELECTRON MICROSCOPY	1.83	119
76	9FBV\|1\|b	70S Escherichia coli ribosome with P-site initiatior tRNA.	ELECTRON MICROSCOPY	2.4	119
77	8R6C\|1\|b	70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.	ELECTRON MICROSCOPY	2.2	119
78	8CGV\|1\|b	Tiamulin bound to the 50S subunit	ELECTRON MICROSCOPY	1.66	56
79	8AKN\|1\|b	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome	ELECTRON MICROSCOPY	2.3	119
80	8AM9\|1\|b	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome	ELECTRON MICROSCOPY	2.8	119
81	8ANA\|1\|b	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit	ELECTRON MICROSCOPY	2.1	119
82	8EMM\|1\|b	Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates	ELECTRON MICROSCOPY	2.1	119
83	7OTC\|1\|B	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B	ELECTRON MICROSCOPY	2.9	120
84	8AP4\|1\|b	Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA	ELECTRON MICROSCOPY	3	119
85	8EIU\|1\|b	E. coli 70S ribosome with A-loop mutations U2554C and U2555C	ELECTRON MICROSCOPY	2.24	119
86	8G6X\|1\|b	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.31	119
87	9GHA\|1\|b	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)	ELECTRON MICROSCOPY	2.24	119
88	9GHC\|1\|b	Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)	ELECTRON MICROSCOPY	2.79	119
89	9GHB\|1\|b	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)	ELECTRON MICROSCOPY	2.21	119
90	9GHF\|1\|b	Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)	ELECTRON MICROSCOPY	2.4	119
91	9GHD\|1\|b	Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)	ELECTRON MICROSCOPY	2.41	119
92	9GHE\|1\|b	Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)	ELECTRON MICROSCOPY	1.87	119
93	8FTO\|1\|b	E. coli 70S ribosome with an improved MS2 tag inserted in H98	ELECTRON MICROSCOPY	1.85	119
94	8G6W\|1\|b	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.02	119
95	8G6Y\|1\|b	Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.09	119
96	7K00\|1\|b	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	ELECTRON MICROSCOPY	1.98	119
97	8AYE\|1\|b	E. coli 70S ribosome bound to thermorubin and fMet-tRNA	ELECTRON MICROSCOPY	1.96	119
98	9CG5\|1\|b	70S initiation complex (tRNA-fMet M1 + UUG start codon)	ELECTRON MICROSCOPY	2.59	119
99	9CG6\|1\|b	70S initiation complex (tRNA-fMet M1 + GUG start codon)	ELECTRON MICROSCOPY	2.61	119
100	9CG7\|1\|b	70S initiation complex (tRNA-fMet M1 + AUG start codon)	ELECTRON MICROSCOPY	2.75	119
101	9AX7\|1\|b	70S initiation complex (tRNA-fMet M1 + CUG start codon)	ELECTRON MICROSCOPY	2.63	119
102	8P16\|1\|3	E167K RF2 on E. coli 70S release complex with UGG (Structure I)	ELECTRON MICROSCOPY	2.77	119
103	8P18\|1\|3	E167K RF2 on E. coli 70S release complex with UGG (Structure III)	ELECTRON MICROSCOPY	2.77	119
104	8P17\|1\|3	E167K RF2 on E. coli 70S release complex with UGG (Structure II)	ELECTRON MICROSCOPY	2.78	119
105	8QK7\|1\|3	E167K RF2 on E. coli 70S release complex with UAA	ELECTRON MICROSCOPY	2.77	119
106	8IFC\|1\|b	Arbekacin-bound E.coli 70S ribosome in the PURE system	ELECTRON MICROSCOPY	2.9	119
107	8IFB\|1\|b	Dibekacin-bound E.coli 70S ribosome in the PURE system	ELECTRON MICROSCOPY	2.43	119
108	9GXX\|1\|b	70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codon	ELECTRON MICROSCOPY	2.61	119
109	8B0X\|1\|b	Translating 70S ribosome in the unrotated state (P and E, tRNAs)	ELECTRON MICROSCOPY	1.55	119
110	9Q87\|1\|b	Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+	ELECTRON MICROSCOPY	1.55	120
111	9H0L\|1\|b	70S ribosome with cognate tRNASer3 bound to A-site AGC codon	ELECTRON MICROSCOPY	2.49	119
112	7Y7F\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)	ELECTRON MICROSCOPY	2.43	119
113	7Y7H\|1\|b	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)	ELECTRON MICROSCOPY	2.51	119
114	7Y7G\|1\|b	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)	ELECTRON MICROSCOPY	2.34	119
115	7Y7E\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.41	119
116	7Y7D\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.58	119
117	7Y7C\|1\|b	Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.51	119
118	7OIZ\|1\|b	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	ELECTRON MICROSCOPY	2.9	119
119	7P3K\|1\|b	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)	ELECTRON MICROSCOPY	2.9	119
120	8ZTU\|1\|b	70S ribosome arrested by PepNL	ELECTRON MICROSCOPY	2.9	119
121	8ZTV\|1\|b	70S ribosome arrested by PepNL with RF2	ELECTRON MICROSCOPY	2.9	119
122	9N2C\|1\|5	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)	ELECTRON MICROSCOPY	2.4	120
123	8YUQ\|1\|b	E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA	ELECTRON MICROSCOPY	2.41	119
124	8HU1\|1\|b	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state	ELECTRON MICROSCOPY	2.69	119
125	8YUO\|1\|b	E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site	ELECTRON MICROSCOPY	2.25	119
126	8HSP\|1\|b	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state	ELECTRON MICROSCOPY	2.32	119
127	8HTZ\|1\|b	E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state	ELECTRON MICROSCOPY	2.4	119
128	8YUP\|1\|b	E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA	ELECTRON MICROSCOPY	2.39	119
129	8YUS\|1\|b	E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA	ELECTRON MICROSCOPY	2.43	119
130	8YUR\|1\|b	E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA	ELECTRON MICROSCOPY	2.47	119
131	9AX8\|1\|X	70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)	ELECTRON MICROSCOPY	2.6	118
132	6HRM\|1\|3	E. coli 70S d2d8 stapled ribosome	ELECTRON MICROSCOPY	2.96	120
133	7NWT\|1\|3	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	ELECTRON MICROSCOPY	2.66	120
134	8E49\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC31	ELECTRON MICROSCOPY	2.05	118
135	7QQ3\|1\|J	Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.	ELECTRON MICROSCOPY	2.1	118
136	7Q4K\|1\|BB	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain	ELECTRON MICROSCOPY	3	120
137	6TBV\|1\|05S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	ELECTRON MICROSCOPY	2.7	120
138	6TC3\|1\|05S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	ELECTRON MICROSCOPY	2.7	120
139	7O1A\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.4	120
140	7O19\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.9	120
141	7O1C\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.6	120
142	7B5K\|1\|B	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	ELECTRON MICROSCOPY	2.9	120
143	7ZTA\|1\|05S1	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide	ELECTRON MICROSCOPY	2.7	120
144	7NSO\|1\|B	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	ELECTRON MICROSCOPY	2.9	120
145	8QBT\|1\|B	E. coli ApdP-stalled ribosomal complex	ELECTRON MICROSCOPY	2.2	118
146	5MDV\|1\|3	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	120
147	6ORE\|1\|3	Release complex 70S	ELECTRON MICROSCOPY	2.9	120
148	5NWY\|1\|O	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	118
149	7OIF\|1\|3	CspA-27 cotranslational folding intermediate 2	ELECTRON MICROSCOPY	3	120
150	7OT5\|1\|3	CspA-70 cotranslational folding intermediate 1	ELECTRON MICROSCOPY	2.9	120
151	7OII\|1\|3	CspA-70 cotranslational folding intermediate 2	ELECTRON MICROSCOPY	3	120
152	7ZQ6\|1\|a	70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain	ELECTRON MICROSCOPY	2.75	118
153	7S1I\|1\|J	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.48	118
154	7S1G\|1\|J	wild-type Escherichia coli stalled ribosome with antibiotic linezolid	ELECTRON MICROSCOPY	2.48	118
155	7S1H\|1\|J	Wild-type Escherichia coli ribosome with antibiotic linezolid	ELECTRON MICROSCOPY	2.35	118
156	7S1K\|1\|J	Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.42	118
157	7S1J\|1\|J	Wild-type Escherichia coli ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.47	118
158	7YLA\|1\|J	Cryo-EM structure of 50S-HflX complex	ELECTRON MICROSCOPY	2.52	118
159	7M5D\|1\|3	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)	ELECTRON MICROSCOPY	2.8	120
160	7BL4\|1\|B	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	ELECTRON MICROSCOPY	2.4	119
161	6PCH\|1\|J	E. coli 50S ribosome bound to compound 21	ELECTRON MICROSCOPY	2.9	118
162	6PCT\|1\|J	E. coli 50S ribosome bound to compound 41q	ELECTRON MICROSCOPY	2.8	118
163	6PC7\|1\|J	E. coli 50S ribosome bound to compound 46	ELECTRON MICROSCOPY	2.5	118
164	6PCQ\|1\|J	E. coli 50S ribosome bound to VM2	ELECTRON MICROSCOPY	2.6	118
165	6PC8\|1\|J	E. coli 50S ribosome bound to compound 40q	ELECTRON MICROSCOPY	2.9	118
166	6PC6\|1\|J	E. coli 50S ribosome bound to compound 47	ELECTRON MICROSCOPY	2.5	118
167	6PCS\|1\|J	E. coli 50S ribosome bound to compound 40e	ELECTRON MICROSCOPY	2.8	118
168	6PCR\|1\|J	E. coli 50S ribosome bound to compound 40o	ELECTRON MICROSCOPY	2.5	118
169	8E43\|1\|J	E. coli 50S ribosome bound to compound streptogramin A analog 3336	ELECTRON MICROSCOPY	2.09	118
170	6PC5\|1\|J	E. coli 50S ribosome bound to compounds 46 and VS1	ELECTRON MICROSCOPY	2.7	118
171	8E3O\|1\|J	E. coli 50S ribosome bound to solithromycin and VM1	ELECTRON MICROSCOPY	1.99	118
172	8E30\|1\|J	E. coli 50S ribosome bound to compound streptogramin A analog 3142	ELECTRON MICROSCOPY	1.91	118
173	8E44\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC09	ELECTRON MICROSCOPY	2.53	118
174	8E33\|1\|J	E. coli 50S ribosome bound to compound streptogramin analog SAB001	ELECTRON MICROSCOPY	2.23	118
175	8E41\|1\|J	E. coli 50S ribosome bound to tiamulin and VS1	ELECTRON MICROSCOPY	2.13	118
176	8E36\|1\|J	E. coli 50S ribosome bound to compound streptogramin A analog 3146	ELECTRON MICROSCOPY	2.38	118
177	8E42\|1\|J	E. coli 50S ribosome bound to tiamulin and azithromycin	ELECTRON MICROSCOPY	2.29	118
178	8E3M\|1\|J	E. coli 50S ribosome bound to L-linker solithromycin conjugate	ELECTRON MICROSCOPY	2.25	118
179	6U48\|1\|CB	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	ELECTRON MICROSCOPY	2.87	118
180	6WYV\|1\|J	E. coli 50S ribosome bound to compounds 47 and VS1	ELECTRON MICROSCOPY	2.75	118
181	9D89\|1\|E	E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)	ELECTRON MICROSCOPY	1.95	119
182	8RPY\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137	ELECTRON MICROSCOPY	2.64	120
183	8RPZ\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I	ELECTRON MICROSCOPY	2.44	120
184	8RQ0\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II	ELECTRON MICROSCOPY	2.44	120
185	8RQ2\|1\|B	Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III	ELECTRON MICROSCOPY	2.44	120
186	9H3Z\|1\|B	mature 50S subunit	ELECTRON MICROSCOPY	2.98	120
187	7TOS\|1\|5S	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20	ELECTRON MICROSCOPY	2.9	120
188	6WDE\|1\|2	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	120
189	6WD0\|1\|2	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	120
190	5AFI\|1\|B	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	120
191	5WFS\|1\|B	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	120
192	7ST2\|1\|2	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	ELECTRON MICROSCOPY	2.9	120
193	6Y69\|1\|B	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	120
194	6H4N\|1\|B	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	120
195	7ST6\|1\|2	Pre translocation, non-rotated 70S ribosome (Structure I)	ELECTRON MICROSCOPY	3	120
196	5WDT\|1\|B	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	120
197	9NL5\|1\|R2	E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation	ELECTRON MICROSCOPY	3	119
198	7Z20\|1\|a	70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain	ELECTRON MICROSCOPY	2.29	118
199	8E45\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC17	ELECTRON MICROSCOPY	2.3	118
200	8E46\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC21	ELECTRON MICROSCOPY	2.32	118
201	8E3L\|1\|J	E. coli 50S ribosome bound to D-linker solithromycin conjugate	ELECTRON MICROSCOPY	2.35	118
202	8E32\|1\|J	E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1	ELECTRON MICROSCOPY	2.35	118
203	8FZH\|1\|B	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)	ELECTRON MICROSCOPY	2.9	120
204	8FZE\|1\|B	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)	ELECTRON MICROSCOPY	3	120
205	8FZJ\|1\|B	Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)	ELECTRON MICROSCOPY	3	120
206	8G7P\|1\|B	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)	ELECTRON MICROSCOPY	2.9	120
207	8EKC\|1\|B	Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA	ELECTRON MICROSCOPY	2.7	120
208	8G7R\|1\|B	Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)	ELECTRON MICROSCOPY	2.8	120
209	8BHJ\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.81	120
210	8BH4\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.62	120
211	8BHN\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.85	120
212	8BF7\|1\|1	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.33	120
213	8BGH\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.88	120
214	8BIM\|1\|1	Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site	ELECTRON MICROSCOPY	2.04	120
215	8BIL\|1\|1	Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.	ELECTRON MICROSCOPY	2.04	120
216	8BHP\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.37	120
217	8BHL\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.21	120
218	8BGE\|1\|1	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.11	120
219	8E48\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC30	ELECTRON MICROSCOPY	2.27	118
220	8E47\|1\|J	E. coli 50S ribosome bound to antibiotic analog SLC26	ELECTRON MICROSCOPY	2.32	118
221	8E35\|1\|J	E. coli 50S ribosome bound to compound SAB002	ELECTRON MICROSCOPY	2.27	118

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_10157.153 Current

Release history

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