Equivalence class NR_3.0_18489.13 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 11AA|1|3 (rep) | Internal transcribed spacer 2 ITS2 | Saccharomyces cerevisiae S288C | Yeast co-transcriptional pre-60S assembly intermediate Nop12 RNP | Electron microscopy | 2.78 | 85 | 2026-07-01 | |||
| 2 | 8V87|1|6 | ITS2 RNA | Saccharomyces cerevisiae BY4741 | 60S ribosome biogenesis intermediate (Dbp10 post-catalytic structure - Overall map) | Electron microscopy | 2.66 | 87 | 2024-05-01 | |||
| 3 | 8V83|1|6 | Saccharomyces cerevisiae ITS-2 | Saccharomyces cerevisiae BY4741 | 60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map) | Electron microscopy | 2.53 | 58 | 2024-05-01 | |||
| 4 | 8V84|1|6 | ITS2 RNA | Saccharomyces cerevisiae BY4741 | 60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map) | Electron microscopy | 2.7 | 58 | 2024-05-01 |
Release history
| Release | 4.46 |
|---|---|
| Date | 2026-07-01 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 8V83|1|6 | 60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map) | ELECTRON MICROSCOPY | 2.53 | 58 | |
| 2 | 8V84|1|6 | 60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map) | ELECTRON MICROSCOPY | 2.7 | 58 | |
| 3 | 8V87|1|6 | 60S ribosome biogenesis intermediate (Dbp10 post-catalytic structure - Overall map) | ELECTRON MICROSCOPY | 2.66 | 87 | |
| 4 | 11AA|1|3 | Yeast co-transcriptional pre-60S assembly intermediate Nop12 RNP | ELECTRON MICROSCOPY | 2.78 | 85 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: