Equivalence class NR_3.0_26028.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6YDP|1|AV (rep) | fMet-tRNAMet (P site), mRNA | Homo sapiens | 55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST) | Electron microscopy | 3 | 71 | 2020-07-15 | |||
| 2 | 8OIT|1|AG | P-site Met-tRNA(Met) | Homo sapiens | 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA | Electron microscopy | 2.9 | 71 | 2023-06-14 | |||
| 3 | 8QRN|1|5 | fMet-tRNAMet | Homo sapiens | mt-SSU in GTPBP8 knock-out cells, state 4 | Electron microscopy | 2.98 | 71 | 2024-06-26 | |||
| 4 | 8OIS|1|AG | mRNA, P-site Met-tRNA(Met) | Homo sapiens | 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA | Electron microscopy | 3 | 71 | 2023-06-14 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 8OIT|1|AG | 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA | ELECTRON MICROSCOPY | 2.9 | 71 | |
| 2 | 8OIS|1|AG | 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA | ELECTRON MICROSCOPY | 3 | 71 | |
| 3 | 6YDP|1|AV | 55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST) | ELECTRON MICROSCOPY | 3 | 71 | |
| 4 | 8QRN|1|5 | mt-SSU in GTPBP8 knock-out cells, state 4 | ELECTRON MICROSCOPY | 2.98 | 71 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: