| 1 | 5L4O|1|A (rep) | Transfer RNA | tRNA (76-MER) | Escherichia coli | Bacteria | RF00005 | Structure of an E.coli initiator tRNAfMet A1-U72 variant | X-ray diffraction | 2.8 | 2017-03-01 |
| 2 | 5HCQ|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
| 3 | 8G2C|1|1x | Transfer RNA | P-site Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolution | X-ray diffraction | 2.65 | 2023-12-27 |
| 4 | 8G2A|1|1x | Transfer RNA | P-site Peptidyl-tRNA fMTHSMRC-tRNAmet RNA-part | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution | X-ray diffraction | 2.45 | 2023-12-27 |
| 5 | 8VTU|1|1x | Transfer RNA | Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution | X-ray diffraction | 2.4 | 2024-08-07 |
| 6 | 8UD7|1|1x | Transfer RNA | MF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution | X-ray diffraction | 2.55 | 2024-02-21 |
| 7 | 8G29|1|1x | Transfer RNA | P-site Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution | X-ray diffraction | 2.55 | 2023-12-27 |
| 8 | 8G2A|1|2x | Transfer RNA | P-site Peptidyl-tRNA fMTHSMRC-tRNAmet RNA-part | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution | X-ray diffraction | 2.45 | 2023-12-27 |
| 9 | 8G29|1|2x | Transfer RNA | P-site Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution | X-ray diffraction | 2.55 | 2023-12-27 |
| 10 | 8G2C|1|2x | Transfer RNA | P-site Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolution | X-ray diffraction | 2.65 | 2023-12-27 |
| 11 | 8VTU|1|2x | Transfer RNA | Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution | X-ray diffraction | 2.4 | 2024-08-07 |
| 12 | 8VTX|1|1x | Transfer RNA | Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution | X-ray diffraction | 2.4 | 2024-08-07 |
| 13 | 8VTV|1|1x | Transfer RNA | Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution | X-ray diffraction | 2.55 | 2024-08-07 |
| 14 | 5IBB|1|2K | Transfer RNA | mRNA, tRNAfMet | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site | X-ray diffraction | 2.96 | 2016-05-25 |
| 15 | 8EKB|1|1x | Transfer RNA | M-Stop-mRNA, P-site deacylated tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolution | X-ray diffraction | 2.7 | 2022-12-21 |
| 16 | 6CAE|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-ray diffraction | 2.6 | 2018-04-18 |
| 17 | 8UD7|1|2x | Transfer RNA | MF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution | X-ray diffraction | 2.55 | 2024-02-21 |
| 18 | 7U2J|1|1x | Transfer RNA | MG-mRNA, P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-part | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution | X-ray diffraction | 2.55 | 2022-07-13 |
| 19 | 8G2B|1|1x | Transfer RNA | P-site Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolution | X-ray diffraction | 2.55 | 2023-12-27 |
| 20 | 8VTX|1|2x | Transfer RNA | Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution | X-ray diffraction | 2.4 | 2024-08-07 |
| 21 | 8UD8|1|1x | Transfer RNA | MF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution | X-ray diffraction | 2.6 | 2024-02-21 |
| 22 | 8UD6|1|1x | Transfer RNA | MF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution | X-ray diffraction | 2.7 | 2024-02-21 |
| 23 | 5HCQ|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
| 24 | 8VTV|1|2x | Transfer RNA | Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution | X-ray diffraction | 2.55 | 2024-08-07 |
| 25 | 8EKB|1|2x | Transfer RNA | M-Stop-mRNA, P-site deacylated tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolution | X-ray diffraction | 2.7 | 2022-12-21 |
| 26 | 8UD8|1|2x | Transfer RNA | MF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution | X-ray diffraction | 2.6 | 2024-02-21 |
| 27 | 7OSA|1|PSIT | Transfer RNA | MRNA, Psite tRNA-Phe | Escherichia coli | Bacteria | RF00005 | Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands | X-ray diffraction | 3 | 2021-12-08 |
| 28 | 7U2H|1|1x | Transfer RNA | MG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution | X-ray diffraction | 2.55 | 2022-07-13 |
| 29 | 8G2B|1|2x | Transfer RNA | P-site Aminoacylated fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolution | X-ray diffraction | 2.55 | 2023-12-27 |
| 30 | 8UVR|1|1x | Transfer RNA | P-site Deacylated tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution | X-ray diffraction | 2.6 | 2024-08-07 |
| 31 | 5IB7|1|2K | Transfer RNA | mRNA, tRNAfMet | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-ray diffraction | 2.99 | 2016-05-25 |
| 32 | 4V8D|1|CC | Transfer RNA | MRNA, TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Structure analysis of ribosomal decoding (cognate tRNA-tyr complex). | X-ray diffraction | 3 | 2014-07-09 |
| 33 | 7RQ8|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution | X-ray diffraction | 2.5 | 2021-10-13 |
| 34 | 5HCR|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
| 35 | 4Z8C|1|1x | Transfer RNA | Initiator Methionine tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin | X-ray diffraction | 2.9 | 2015-05-20 |
| 36 | 5J4B|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-ray diffraction | 2.6 | 2016-04-27 |
| 37 | 7U2J|1|2x | Transfer RNA | MG-mRNA, P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-part | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution | X-ray diffraction | 2.55 | 2022-07-13 |
| 38 | 6XHY|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution | X-ray diffraction | 2.6 | 2020-12-23 |
| 39 | 4WSD|1|2L | Transfer RNA | mRNA, tRNA-fMet | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin. | X-ray diffraction | 2.95 | 2015-06-10 |
| 40 | 8UD6|1|2x | Transfer RNA | MF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution | X-ray diffraction | 2.7 | 2024-02-21 |
| 41 | 8EV7|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs | X-ray diffraction | 2.89 | 2023-08-09 |
| 42 | 4V8D|1|AC | Transfer RNA | MRNA, TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Structure analysis of ribosomal decoding (cognate tRNA-tyr complex). | X-ray diffraction | 3 | 2014-07-09 |
| 43 | 5IBB|1|2L | Transfer RNA | mRNA, tRNAfMet | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site | X-ray diffraction | 2.96 | 2016-05-25 |
| 44 | 8UVS|1|1x | Transfer RNA | P-site Deacylated tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution | X-ray diffraction | 2.75 | 2024-08-07 |
| 45 | 6XHY|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution | X-ray diffraction | 2.6 | 2020-12-23 |
| 46 | 5J4B|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-ray diffraction | 2.6 | 2016-04-27 |
| 47 | 4Z8C|1|2x | Transfer RNA | Initiator Methionine tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin | X-ray diffraction | 2.9 | 2015-05-20 |
| 48 | 4WSD|1|2K | Transfer RNA | mRNA, tRNA-fMet | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin. | X-ray diffraction | 2.95 | 2015-06-10 |
| 49 | 6CAE|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-ray diffraction | 2.6 | 2018-04-18 |
| 50 | 8UVR|1|2x | Transfer RNA | P-site Deacylated tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution | X-ray diffraction | 2.6 | 2024-08-07 |
| 51 | 5J4C|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-ray diffraction | 2.8 | 2016-04-27 |
| 52 | 4WPO|1|BX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state | X-ray diffraction | 2.8 | 2015-01-28 |
| 53 | 5W4K|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution | X-ray diffraction | 2.7 | 2017-08-30 |
| 54 | 1VY4|1|AX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. | X-ray diffraction | 2.6 | 2014-08-20 |
| 55 | 6OF1|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution | X-ray diffraction | 2.8 | 2019-04-17 |
| 56 | 6XHW|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution | X-ray diffraction | 2.5 | 2020-12-23 |
| 57 | 4W2H|1|AX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site | X-ray diffraction | 2.7 | 2014-10-15 |
| 58 | 7RQ8|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution | X-ray diffraction | 2.5 | 2021-10-13 |
| 59 | 5HCR|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
| 60 | 5HD1|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.7 | 2016-04-06 |
| 61 | 4LNT|1|XV | Transfer RNA | A-site ASL SufA6, messenger RNA, P-site tRNA fMet | Escherichia coli | Bacteria | RF00005 | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome | X-ray diffraction | 2.94 | 2014-08-06 |
| 62 | 5HCP|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.89 | 2016-04-06 |
| 63 | 6OF1|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution | X-ray diffraction | 2.8 | 2019-04-17 |
| 64 | 8CVK|1|1x | Transfer RNA | MF-mRNA, P-site Peptidyl-tRNA fMRC-NH-tRNAmet RNA-part | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution | X-ray diffraction | 2.5 | 2022-10-19 |
| 65 | 5HAU|1|1w | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 3 | 2016-04-06 |
| 66 | 5J4C|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-ray diffraction | 2.8 | 2016-04-27 |
| 67 | 7U2I|1|1x | Transfer RNA | MG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution | X-ray diffraction | 2.55 | 2022-07-13 |
| 68 | 4W2I|1|AX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.7 | 2014-10-15 |
| 69 | 6XHV|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution | X-ray diffraction | 2.4 | 2020-12-23 |
| 70 | 5WIS|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution | X-ray diffraction | 2.7 | 2018-02-14 |
| 71 | 5IB7|1|2L | Transfer RNA | mRNA, tRNAfMet | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-ray diffraction | 2.99 | 2016-05-25 |
| 72 | 4W2G|1|CX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.55 | 2014-10-15 |
| 73 | 6XQD|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution | X-ray diffraction | 2.8 | 2020-08-05 |
| 74 | 6ND5|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution | X-ray diffraction | 2.6 | 2019-03-20 |
| 75 | 4LNT|1|QV | Transfer RNA | A-site ASL SufA6, messenger RNA, P-site tRNA fMet | Escherichia coli | Bacteria | RF00005 | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome | X-ray diffraction | 2.94 | 2014-08-06 |
| 76 | 4W2H|1|CX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site | X-ray diffraction | 2.7 | 2014-10-15 |
| 77 | 5W4K|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution | X-ray diffraction | 2.7 | 2017-08-30 |
| 78 | 8EV7|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs | X-ray diffraction | 2.89 | 2023-08-09 |
| 79 | 8CVK|1|2x | Transfer RNA | MF-mRNA, P-site Peptidyl-tRNA fMRC-NH-tRNAmet RNA-part | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution | X-ray diffraction | 2.5 | 2022-10-19 |
| 80 | 7U2H|1|2x | Transfer RNA | MG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution | X-ray diffraction | 2.55 | 2022-07-13 |
| 81 | 8G2D|1|1x | Transfer RNA | P-site Deacylated tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolution | X-ray diffraction | 2.7 | 2023-12-27 |
| 82 | 6XHW|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution | X-ray diffraction | 2.5 | 2020-12-23 |
| 83 | 5HAU|1|2w | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 3 | 2016-04-06 |
| 84 | 6XQD|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution | X-ray diffraction | 2.8 | 2020-08-05 |
| 85 | 6XHV|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution | X-ray diffraction | 2.4 | 2020-12-23 |
| 86 | 4Y4P|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution | X-ray diffraction | 2.5 | 2015-03-18 |
| 87 | 4W2G|1|AX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.55 | 2014-10-15 |
| 88 | 6O97|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution | X-ray diffraction | 2.75 | 2019-04-17 |
| 89 | 8CVJ|1|1x | Transfer RNA | MF-mRNA, P-site Peptidyl-tRNA fMSEAC-NH-tRNAmet RNA-part | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution | X-ray diffraction | 2.4 | 2022-10-19 |
| 90 | 5HCP|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.89 | 2016-04-06 |
| 91 | 5DOY|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution | X-ray diffraction | 2.6 | 2015-12-30 |
| 92 | 5WIT|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-ray diffraction | 2.6 | 2018-02-14 |
| 93 | 5VP2|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-ray diffraction | 2.8 | 2017-06-28 |
| 94 | 8EV6|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs | X-ray diffraction | 2.946 | 2023-08-09 |
| 95 | 5HD1|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.7 | 2016-04-06 |
| 96 | 9B00|1|1x | Transfer RNA | P-site Deacylated tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with berberine analog of chloramphenicol CAM-BER, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.80A resolution | X-ray diffraction | 2.8 | 2024-08-07 |
| 97 | 4W2I|1|CX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.7 | 2014-10-15 |
| 98 | 6ND5|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution | X-ray diffraction | 2.6 | 2019-03-20 |
| 99 | 8CVJ|1|2x | Transfer RNA | MF-mRNA, P-site Peptidyl-tRNA fMSEAC-NH-tRNAmet RNA-part | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution | X-ray diffraction | 2.4 | 2022-10-19 |
| 100 | 8CVL|1|1x | Transfer RNA | MF-mRNA, P-site Peptidyl-tRNA fMTHSMRC-NH-tRNAmet RNA-part | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution | X-ray diffraction | 2.3 | 2022-10-19 |
| 101 | 7RQ9|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution | X-ray diffraction | 2.6 | 2021-10-13 |
| 102 | 1VY7|1|AX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.8 | 2014-08-20 |
| 103 | 4Z3S|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution | X-ray diffraction | 2.65 | 2015-06-03 |
| 104 | 8G2D|1|2x | Transfer RNA | P-site Deacylated tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolution | X-ray diffraction | 2.7 | 2023-12-27 |
| 105 | 1VY4|1|CX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. | X-ray diffraction | 2.6 | 2014-08-20 |
| 106 | 4W2F|1|AX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.4 | 2014-10-15 |
| 107 | 1VY5|1|AX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. | X-ray diffraction | 2.55 | 2014-08-20 |
| 108 | 4WPO|1|DX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state | X-ray diffraction | 2.8 | 2015-01-28 |
| 109 | 4V51|1|CV | Transfer RNA | E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54) | Escherichia coli | Bacteria | RF00005 | Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin | X-ray diffraction | 2.8 | 2014-07-09 |
| 110 | 7JQL|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution | X-ray diffraction | 3 | 2020-08-26 |
| 111 | 7U2I|1|2x | Transfer RNA | MG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution | X-ray diffraction | 2.55 | 2022-07-13 |
| 112 | 8CVL|1|2x | Transfer RNA | MF-mRNA, P-site Peptidyl-tRNA fMTHSMRC-NH-tRNAmet RNA-part | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution | X-ray diffraction | 2.3 | 2022-10-19 |
| 113 | 7JQL|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution | X-ray diffraction | 3 | 2020-08-26 |
| 114 | 4V9R|1|AX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome | X-ray diffraction | 3 | 2014-07-09 |
| 115 | 7RQ9|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution | X-ray diffraction | 2.6 | 2021-10-13 |
| 116 | 4V9R|1|CX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome | X-ray diffraction | 3 | 2014-07-09 |
| 117 | 4W2F|1|CX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.4 | 2014-10-15 |
| 118 | 5WIS|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution | X-ray diffraction | 2.7 | 2018-02-14 |
| 119 | 4V51|1|AV | Transfer RNA | E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54) | Escherichia coli | Bacteria | RF00005 | Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin | X-ray diffraction | 2.8 | 2014-07-09 |
| 120 | 6ND6|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution | X-ray diffraction | 2.85 | 2019-02-20 |
| 121 | 6O97|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution | X-ray diffraction | 2.75 | 2019-04-17 |
| 122 | 4Y4P|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution | X-ray diffraction | 2.5 | 2015-03-18 |
| 123 | 1VY6|1|AX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.9 | 2014-08-20 |
| 124 | 4Z3S|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution | X-ray diffraction | 2.65 | 2015-06-03 |
| 125 | 8UVS|1|2x | Transfer RNA | P-site Deacylated tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution | X-ray diffraction | 2.75 | 2024-08-07 |
| 126 | 6UO1|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution | X-ray diffraction | 2.95 | 2019-11-27 |
| 127 | 6UO1|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution | X-ray diffraction | 2.95 | 2019-11-27 |
| 128 | 5VP2|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-ray diffraction | 2.8 | 2017-06-28 |
| 129 | 1VY6|1|CX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.9 | 2014-08-20 |
| 130 | 8EV6|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs | X-ray diffraction | 2.946 | 2023-08-09 |
| 131 | 4WQY|1|BX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid) | X-ray diffraction | 2.8 | 2015-01-28 |
| 132 | 5DOY|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution | X-ray diffraction | 2.6 | 2015-12-30 |
| 133 | 5WIT|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-ray diffraction | 2.6 | 2018-02-14 |
| 134 | 5F8K|1|1x | Transfer RNA | mRNA, tRNAiMet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-02-03 |
| 135 | 7OSM|1|PSIT | Transfer RNA | FMET tRNA, MRNA | Escherichia coli | Bacteria | RF00005 | Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands | X-ray diffraction | 3 | 2021-12-08 |
| 136 | 6ND6|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution | X-ray diffraction | 2.85 | 2019-02-20 |
| 137 | 1VY5|1|CX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. | X-ray diffraction | 2.55 | 2014-08-20 |
| 138 | 4V8B|1|AC | Transfer RNA | MRNA, TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
| 139 | 9B00|1|2x | Transfer RNA | P-site Deacylated tRNAmet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with berberine analog of chloramphenicol CAM-BER, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.80A resolution | X-ray diffraction | 2.8 | 2024-08-07 |
| 140 | 6XQE|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution | X-ray diffraction | 3 | 2020-08-05 |
| 141 | 4V67|1|AY | Transfer RNA | MRNA, P AND E-SITE TRNA(FMET) | Escherichia coli | Bacteria | RF00005 | Crystal structure of a translation termination complex formed with release factor RF2. | X-ray diffraction | 3 | 2014-07-09 |
| 142 | 6XQE|1|2x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution | X-ray diffraction | 3 | 2020-08-05 |
| 143 | 4V7L|1|CX | Transfer RNA | RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-Met | Escherichia coli | Bacteria | RF00005 | The structures of viomycin bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
| 144 | 4V8B|1|CC | Transfer RNA | MRNA, TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
| 145 | 4V7L|1|AX | Transfer RNA | RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-Met | Escherichia coli | Bacteria | RF00005 | The structures of viomycin bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
| 146 | 5F8K|1|2x | Transfer RNA | mRNA, tRNAiMet | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-02-03 |
| 147 | 4V67|1|CY | Transfer RNA | MRNA, P AND E-SITE TRNA(FMET) | Escherichia coli | Bacteria | RF00005 | Crystal structure of a translation termination complex formed with release factor RF2. | X-ray diffraction | 3 | 2014-07-09 |
| 148 | 4WQY|1|DX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid) | X-ray diffraction | 2.8 | 2015-01-28 |
| 149 | 1VY7|1|CX | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.8 | 2014-08-20 |
| 150 | 4V8B|1|AD | Transfer RNA | TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
| 151 | 4V8B|1|CD | Transfer RNA | TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
| 152 | 4V67|1|AZ | Transfer RNA | P AND E-SITE TRNA(FMET) | Escherichia coli | Bacteria | RF00005 | Crystal structure of a translation termination complex formed with release factor RF2. | X-ray diffraction | 3 | 2014-07-09 |
| 153 | 4V67|1|CZ | Transfer RNA | P AND E-SITE TRNA(FMET) | Escherichia coli | Bacteria | RF00005 | Crystal structure of a translation termination complex formed with release factor RF2. | X-ray diffraction | 3 | 2014-07-09 |
| 154 | 6GSJ|1|2L | Transfer RNA | RNA (27-MER), tRNAfMet | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site | X-ray diffraction | 2.96 | 2018-07-04 |
| 155 | 6GSJ|1|2K | Transfer RNA | RNA (27-MER), tRNAfMet | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site | X-ray diffraction | 2.96 | 2018-07-04 |
| 156 | 8B0X|1|Z | Transfer RNA | mRNA, P-site tRNA | Escherichia coli B | Bacteria | RF00005 | Translating 70S ribosome in the unrotated state (P and E, tRNAs) | Electron microscopy | 1.55 | 2022-11-30 |
| 157 | 8FTO|1|Z | Transfer RNA | mRNA, P-site tRNA-fMet | Escherichia coli | Bacteria | RF00005 | E. coli 70S ribosome with an improved MS2 tag inserted in H98 | Electron microscopy | 1.85 | 2023-08-02 |
| 158 | 8CCS|1|Cc | Transfer RNA | Messenger RNA, Transfer RNA fMet | Escherichia coli | Bacteria | RF00005 | 80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex | Electron microscopy | 1.97 | 2023-09-20 |
| 159 | 8AYE|1|Z | Transfer RNA | mRNA, P-site tRNA-fMet | Escherichia coli | Bacteria | RF00005 | E. coli 70S ribosome bound to thermorubin and fMet-tRNA | Electron microscopy | 1.96 | 2023-03-01 |
| 160 | 7K00|1|Z | Transfer RNA | mRNA, P-site tRNA-fMet | Escherichia coli | Bacteria | RF00005 | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | Electron microscopy | 1.98 | 2020-09-23 |
| 161 | 8P2G|1|D | Transfer RNA | mRNA, tRNA | Escherichia coli | Bacteria | RF00005 | Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state | Electron microscopy | 2.02 | 2024-05-01 |
| 162 | 8CDR|1|Cc | Transfer RNA | Messenger RNA, Transfer RNA fMet | Escherichia coli | Bacteria | RF00005 | Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin | Electron microscopy | 2.04 | 2023-09-20 |
| 163 | 8CEH|1|Cc | Transfer RNA | Messenger RNA, Transfer RNA fMet | Escherichia coli | Bacteria | RF00005 | Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin | Electron microscopy | 2.05 | 2023-09-20 |
| 164 | 8G6W|1|Z | Transfer RNA | mRNA, P-site fMet-tRNAfMet | Escherichia coli | Bacteria | RF00005 | Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe | Electron microscopy | 2.02 | 2023-04-05 |
| 165 | 8BIL|1|4 | Transfer RNA | Acylated P-site tRNA(fMet), mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site. | Electron microscopy | 2.04 | 2023-08-16 |
| 166 | 8EMM|1|Y | Transfer RNA | Met-NH-tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates | Electron microscopy | 2.1 | 2023-05-31 |
| 167 | 8EMM|1|Z | Transfer RNA | Met-NH-tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates | Electron microscopy | 2.1 | 2023-05-31 |
| 168 | 6XZ7|1|f | Transfer RNA | Deacylated tRNAi(Met) | Escherichia coli | Bacteria | RF00005 | E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet). | Electron microscopy | 2.1 | 2020-07-22 |
| 169 | 8G6Y|1|Z | Transfer RNA | mRNA, P-site tRNA fMet | Escherichia coli | Bacteria | RF00005 | Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe | Electron microscopy | 2.09 | 2023-04-05 |
| 170 | 8BIM|1|4 | Transfer RNA | Acylated P-site tRNA(fMet), mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site | Electron microscopy | 2.04 | 2023-08-16 |
| 171 | 8BGE|1|4 | Transfer RNA | Acylated P-site tRNA(fMet), mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.11 | 2023-08-16 |
| 172 | 8CGN|1|Bb | Transfer RNA | Messenger RNA, Transfer RNA fMet | Escherichia coli | Bacteria | RF00005 | Non-rotated 80S S. cerevisiae ribosome with ligands | Electron microscopy | 2.28 | 2023-09-20 |
| 173 | 8CGN|1|Cc | Transfer RNA | Transfer RNA fMet | Escherichia coli | Bacteria | RF00005 | Non-rotated 80S S. cerevisiae ribosome with ligands | Electron microscopy | 2.28 | 2023-09-20 |
| 174 | 8EIU|1|Y | Transfer RNA | mRNA, tRNA-fMET | Escherichia coli | Bacteria | RF00005 | E. coli 70S ribosome with A-loop mutations U2554C and U2555C | Electron microscopy | 2.24 | 2023-02-01 |
| 175 | 8EIU|1|Z | Transfer RNA | mRNA, tRNA-fMET | Escherichia coli | Bacteria | RF00005 | E. coli 70S ribosome with A-loop mutations U2554C and U2555C | Electron microscopy | 2.24 | 2023-02-01 |
| 176 | 8BF7|1|4 | Transfer RNA | Deacylated P-site tRNA(fMet), mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.33 | 2023-08-16 |
| 177 | 8BHL|1|4 | Transfer RNA | Acylated P-site tRNA(fMet), mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.21 | 2023-08-16 |
| 178 | 7TOP|1|APTN | Transfer RNA | tRNAfMet | Escherichia coli | Bacteria | RF00005 | Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20 | Electron microscopy | 2.4 | 2022-05-25 |
| 179 | 8P2F|1|D | Transfer RNA | mRNA, tRNA | Escherichia coli | Bacteria | RF00005 | Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state | Electron microscopy | 2.44 | 2024-05-01 |
| 180 | 7Y7G|1|Z | Transfer RNA | mRNA, P-site tRNA-fMet | Escherichia coli | Bacteria | RF00005 | Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) | Electron microscopy | 2.34 | 2023-10-25 |
| 181 | 8P2F|1|F | Transfer RNA | mRNA, tRNA | Escherichia coli | Bacteria | RF00005 | Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state | Electron microscopy | 2.44 | 2024-05-01 |
| 182 | 8G6X|1|Z | Transfer RNA | mRNA, P-site tRNA fMet | Escherichia coli | Bacteria | RF00005 | Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe | Electron microscopy | 2.31 | 2023-03-22 |
| 183 | 8CIV|1|Cc | Transfer RNA | Messenger RNA, Transfer RNA fMet | Escherichia coli | Bacteria | RF00005 | Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin | Electron microscopy | 2.47 | 2023-09-20 |
| 184 | 9FBV|1|Z | Transfer RNA | fMet-tRNA | Escherichia coli BW25113 | Bacteria | RF00005 | 70S Escherichia coli ribosome with P-site initiatior tRNA. | Electron microscopy | 2.4 | 2024-06-26 |
| 185 | 8P2H|1|D | Transfer RNA | mRNA, tRNA | Escherichia coli | Bacteria | RF00005 | Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state | Electron microscopy | 2.49 | 2024-05-01 |
| 186 | 7Y7E|1|Z | Transfer RNA | mRNA, P-site tRNA-fMet | Escherichia coli | Bacteria | RF00005 | Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU) | Electron microscopy | 2.41 | 2023-10-25 |
| 187 | 8BHP|1|4 | Transfer RNA | Deacylated P-site tRNA(fMet), mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.37 | 2023-08-16 |
| 188 | 8IFB|1|6 | Transfer RNA | mRNA, P-site tRNA-fMet | Escherichia coli | Bacteria | RF00005 | Dibekacin-bound E.coli 70S ribosome in the PURE system | Electron microscopy | 2.43 | 2024-02-14 |
| 189 | 7Y7F|1|Z | Transfer RNA | mRNA, P-site tRNA-fMet | Escherichia coli | Bacteria | RF00005 | Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC) | Electron microscopy | 2.43 | 2023-10-25 |
| 190 | 7SA4|1|5 | Transfer RNA | mRNA, P-tRNA, E-tRNA | Escherichia coli | Bacteria | RF00005 | Damaged 70S ribosome with PrfH bound | Electron microscopy | 2.55 | 2022-08-03 |
| 191 | 7SA4|1|6 | Transfer RNA | P-tRNA, E-tRNA | Escherichia coli | Bacteria | RF00005 | Damaged 70S ribosome with PrfH bound | Electron microscopy | 2.55 | 2022-08-03 |
| 192 | 8CG8|1|Cc | Transfer RNA | Messenger RNA, Transfer RNA fMet | Escherichia coli | Bacteria | RF00005 | Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin | Electron microscopy | 2.57 | 2023-09-20 |
| 193 | 7Y7H|1|Z | Transfer RNA | mRNA, P-site tRNA-fMet | Escherichia coli | Bacteria | RF00005 | Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC) | Electron microscopy | 2.51 | 2023-10-25 |
| 194 | 7Y7C|1|Z | Transfer RNA | mRNA, P-site tRNA-fMet | Escherichia coli | Bacteria | RF00005 | Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU) | Electron microscopy | 2.51 | 2023-10-25 |
| 195 | 6XZB|1|f2 | Transfer RNA | Deacylated tRNAi(Met) | Escherichia coli K-12 | Bacteria | RF00005 | E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification). | Electron microscopy | 2.54 | 2020-11-04 |
| 196 | 8BH4|1|4 | Transfer RNA | Deacylated P-site tRNA(fMet), mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.62 | 2023-08-16 |
| 197 | 7UG7|1|Dt | Transfer RNA | mRNA, tRNA-fMet | Escherichia coli | Bacteria | RF00005 | 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B | Electron microscopy | 2.58 | 2022-05-18 |
| 198 | 7Y7D|1|Z | Transfer RNA | mRNA, P-site tRNA-fMet | Escherichia coli | Bacteria | RF00005 | Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU) | Electron microscopy | 2.58 | 2023-10-25 |
| 199 | 7TOO|1|APTN | Transfer RNA | tRNAfMet | Escherichia coli | Bacteria | RF00005 | Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20 | Electron microscopy | 2.7 | 2022-05-25 |
| 200 | 7UNW|1|v | Transfer RNA | mRNA, P-site initiator tRNA | Escherichia coli | Bacteria | RF00005 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Electron microscopy | 2.6 | 2022-06-22 |
| 201 | 7MT7|1|y | Transfer RNA | mRNA, tRNA (Met) | Escherichia coli | Bacteria | RF00005 | Mtb 70S with P and E site tRNAs | Electron microscopy | 2.71 | 2022-02-02 |
| 202 | 7MT7|1|x | Transfer RNA | tRNA (Met) | Escherichia coli | Bacteria | RF00005 | Mtb 70S with P and E site tRNAs | Electron microscopy | 2.71 | 2022-02-02 |
| 203 | 8CF5|1|Cc | Transfer RNA | Messenger RNA, Transfer RNA fMet | Escherichia coli | Bacteria | RF00005 | Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin | Electron microscopy | 2.71 | 2023-09-20 |
| 204 | 8CDL|1|Cc | Transfer RNA | Messenger RNA, Transfer RNA fMet | Escherichia coli | Bacteria | RF00005 | 80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex | Electron microscopy | 2.72 | 2023-09-20 |
| 205 | 8G5Z|1|Pt | Transfer RNA | mRNA, P-site tRNA fMet | Escherichia coli | Bacteria | RF00005 | mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state) | Electron microscopy | 2.64 | 2023-04-19 |
| 206 | 7MT2|1|y | Transfer RNA | initiator tRNA (Met), mRNA | Escherichia coli | Bacteria | RF00005 | Mtb 70S initiation complex | Electron microscopy | 2.76 | 2022-02-02 |
| 207 | 6XZA|1|f2 | Transfer RNA | Deacylated tRNAi(Met) | Escherichia coli K-12 | Bacteria | RF00005 | E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification). | Electron microscopy | 2.66 | 2020-11-04 |
| 208 | 8P16|1|5 | Transfer RNA | mRNA, tRNA(fMet) | Escherichia coli | Bacteria | RF00005 | E167K RF2 on E. coli 70S release complex with UGG (Structure I) | Electron microscopy | 2.77 | 2024-05-22 |
| 209 | 8P18|1|5 | Transfer RNA | mRNA, tRNA(fMet) | Escherichia coli | Bacteria | RF00005 | E167K RF2 on E. coli 70S release complex with UGG (Structure III) | Electron microscopy | 2.77 | 2024-05-22 |
| 210 | 9BDL|1|ETRN | Transfer RNA | tRNAfMet | Escherichia coli K-12 | Bacteria | RF00005 | 80S ribosome with angiogenin | Electron microscopy | 2.8 | 2024-07-24 |
| 211 | 7MT3|1|y | Transfer RNA | mRNA, tRNA (Met) | Escherichia coli | Bacteria | RF00005 | Mtb 70S with P/E tRNA | Electron microscopy | 2.8 | 2022-02-02 |
| 212 | 9BDL|1|PTRN | Transfer RNA | tRNAfMet | Escherichia coli K-12 | Bacteria | RF00005 | 80S ribosome with angiogenin | Electron microscopy | 2.8 | 2024-07-24 |
| 213 | 8P17|1|5 | Transfer RNA | mRNA, tRNA(fMet) | Escherichia coli | Bacteria | RF00005 | E167K RF2 on E. coli 70S release complex with UGG (Structure II) | Electron microscopy | 2.78 | 2024-05-22 |
| 214 | 8CVM|1|C | Transfer RNA | Initiator fMet RNA | Escherichia coli | Bacteria | RF00005 | Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined map | Electron microscopy | 2.66 | 2023-03-15 |
| 215 | 7UNV|1|v | Transfer RNA | mRNA, P-site initiator tRNA | Escherichia coli | Bacteria | RF00005 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Electron microscopy | 2.7 | 2022-06-22 |
| 216 | 8EKC|1|x | Transfer RNA | M-F-Stop mRNA, P-site initiator tRNA | Escherichia coli | Bacteria | RF00005 | Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA | Electron microscopy | 2.7 | 2022-12-07 |
| 217 | 7NWT|1|5 | Transfer RNA | fMet-NH-tRNA(fMet), mRNA | Escherichia coli | Bacteria | RF00005 | Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV) | Electron microscopy | 2.66 | 2021-12-15 |
| 218 | 6AZ1|1|3 | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin | Electron microscopy | 2.7 | 2017-12-06 |
| 219 | 8BHJ|1|4 | Transfer RNA | Deacylated P-site tRNA(fMet), mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.81 | 2023-08-16 |
| 220 | 8BGH|1|4 | Transfer RNA | Acylated P-site tRNA(fMet), mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.88 | 2023-08-16 |
| 221 | 8CRX|1|C | Transfer RNA | 32MF mRNA, P-site initiator tRNA | Escherichia coli | Bacteria | RF00005 | Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound | Electron microscopy | 2.78 | 2023-03-22 |
| 222 | 7TOR|1|ETRN | Transfer RNA | tRNAfMet bound to E-site | Escherichia coli K-12 | Bacteria | RF00005 | Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20 | Electron microscopy | 2.9 | 2022-05-25 |
| 223 | 7ST2|1|6 | Transfer RNA | mRNA, tRNA fMet | Escherichia coli K-12 | Bacteria | RF00005 | Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII) | Electron microscopy | 2.9 | 2022-02-23 |
| 224 | 8G7R|1|x | Transfer RNA | M-I mRNA, P-site initiator tRNA | Escherichia coli | Bacteria | RF00005 | Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III) | Electron microscopy | 2.8 | 2024-03-06 |
| 225 | 8AM9|1|Y | Transfer RNA | Initiator tRNA, mRNA | Escherichia coli BW25113 | Bacteria | RF00005 | Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome | Electron microscopy | 2.8 | 2023-03-08 |
| 226 | 6Y69|1|w | Transfer RNA | E-site tRNA | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX | Electron microscopy | 2.86 | 2020-07-01 |
| 227 | 7M5D|1|5 | Transfer RNA | mRNA, P-tRNA | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I) | Electron microscopy | 2.8 | 2022-10-19 |
| 228 | 7TOR|1|PTRN | Transfer RNA | mRNA, tRNAfMet bound to E-site | Escherichia coli K-12 | Bacteria | RF00005 | Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20 | Electron microscopy | 2.9 | 2022-05-25 |
| 229 | 5AFI|1|v | Transfer RNA | mRNA, P-site fMet-tRNAfMet | Escherichia coli | Bacteria | RF00005 | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | Electron microscopy | 2.9 | 2015-03-11 |
| 230 | 5AFI|1|w | Transfer RNA | P-site fMet-tRNAfMet | Escherichia coli | Bacteria | RF00005 | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | Electron microscopy | 2.9 | 2015-03-11 |
| 231 | 6WDE|1|5 | Transfer RNA | mRNA, tRNAfMet | Escherichia coli | Bacteria | RF00005 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B) | Electron microscopy | 3 | 2020-07-01 |
| 232 | 7ST6|1|6 | Transfer RNA | mRNA, tRNA fMet | Escherichia coli K-12 | Bacteria | RF00005 | Pre translocation, non-rotated 70S ribosome (Structure I) | Electron microscopy | 3 | 2022-02-23 |
| 233 | 6H4N|1|w | Transfer RNA | tRNA | Escherichia coli | Bacteria | RF00005 | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome | Electron microscopy | 3 | 2018-09-05 |
| 234 | 6WD0|1|5 | Transfer RNA | mRNA, tRNAfMet | Escherichia coli | Bacteria | RF00005 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A) | Electron microscopy | 3 | 2020-07-01 |
| 235 | 6WDE|1|6 | Transfer RNA | tRNAfMet | Escherichia coli | Bacteria | RF00005 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B) | Electron microscopy | 3 | 2020-07-01 |
| 236 | 6WD0|1|6 | Transfer RNA | tRNAfMet | Escherichia coli | Bacteria | RF00005 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A) | Electron microscopy | 3 | 2020-07-01 |
| 237 | 7ST6|1|7 | Transfer RNA | mRNA, tRNA fMet | Escherichia coli K-12 | Bacteria | RF00005 | Pre translocation, non-rotated 70S ribosome (Structure I) | Electron microscopy | 3 | 2022-02-23 |
| 238 | 7UNU|1|v | Transfer RNA | mRNA, P-site initiator tRNA | Escherichia coli | Bacteria | RF00005 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Electron microscopy | 2.9 | 2022-06-22 |
| 239 | 8G7P|1|x | Transfer RNA | M-I mRNA, P-site initiator tRNA | Escherichia coli | Bacteria | RF00005 | Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I) | Electron microscopy | 2.9 | 2024-03-06 |
| 240 | 8SYL|1|x | Transfer RNA | M-F-Stop mRNA, P-site initiator tRNA | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs | Electron microscopy | 2.9 | 2023-08-09 |
| 241 | 7UNR|1|v | Transfer RNA | mRNA, P-site initiator tRNA | Escherichia coli | Bacteria | RF00005 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Electron microscopy | 2.9 | 2022-06-22 |
| 242 | 8IFC|1|6 | Transfer RNA | mRNA, P-site tRNAf-Met | Escherichia coli | Bacteria | RF00005 | Arbekacin-bound E.coli 70S ribosome in the PURE system | Electron microscopy | 2.9 | 2024-02-14 |
| 243 | 8B7Y|1|n | Transfer RNA | messenger RNA, P-tRNA fMet | Escherichia coli K-12 | Bacteria | RF00005 | Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B. | Electron microscopy | 3 | 2023-01-25 |
| 244 | 8G61|1|Pt | Transfer RNA | mRNA, RNA (77-MER) | Escherichia coli | Bacteria | RF00005 | mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state) | Electron microscopy | 2.94 | 2023-04-19 |
| 245 | 5WDT|1|v | Transfer RNA | mRNA, tRNA-fMet | Escherichia coli | Bacteria | RF00005 | 70S ribosome-EF-Tu H84A complex with GppNHp | Electron microscopy | 3 | 2018-04-25 |
| 246 | 5WFS|1|v | Transfer RNA | mRNA, tRNA-fMet | Escherichia coli | Bacteria | RF00005 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) | Electron microscopy | 3 | 2018-05-02 |
| 247 | 5WDT|1|w | Transfer RNA | tRNA-fMet | Escherichia coli | Bacteria | RF00005 | 70S ribosome-EF-Tu H84A complex with GppNHp | Electron microscopy | 3 | 2018-04-25 |
| 248 | 5WFS|1|w | Transfer RNA | tRNA-fMet | Escherichia coli | Bacteria | RF00005 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) | Electron microscopy | 3 | 2018-05-02 |
| 249 | 6ORE|1|5 | Transfer RNA | P-tRNA, RNA (5'-R(P*UP*UP*CP*UP*UP*CP*UP*AP*A)-3') | Escherichia coli | Bacteria | RF00005 | Release complex 70S | Electron microscopy | 2.9 | 2019-06-19 |
| 250 | 5MDV|1|5 | Transfer RNA | fMet-NH-tRNA(fMet), mRNA | Escherichia coli | Bacteria | RF00005 | Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state) | Electron microscopy | 2.97 | 2016-12-14 |
| 251 | 6ZTP|1|AW | Transfer RNA | mRNA, tRNA(fmet) P-site | Escherichia coli | Bacteria | RF00005 | E. coli 70S-RNAP expressome complex in uncoupled state 6 | Electron microscopy | 3 | 2020-09-16 |
| 252 | 6ZU1|1|AW | Transfer RNA | mRNA, tRNA(fmet) P-site | Escherichia coli | Bacteria | RF00005 | E. coli 70S-RNAP expressome complex in uncoupled state 2 | Electron microscopy | 3 | 2020-09-16 |
| 253 | 6ZTO|1|AW | Transfer RNA | mRNA, tRNA(fmet) P-site | Escherichia coli | Bacteria | RF00005 | E. coli 70S-RNAP expressome complex in uncoupled state 1 | Electron microscopy | 3 | 2020-09-23 |
| 254 | 8BHN|1|4 | Transfer RNA | Deacylated P-site tRNA(fMet), mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.85 | 2023-08-16 |
| 255 | 8AP4|1|Z | Transfer RNA | P-tRNA | Escherichia coli K-12 | Bacteria | RF00005 | Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA | Electron microscopy | 3 | 2022-11-16 |
| 256 | 8R6C|1|5 | Transfer RNA | N-Formylmethionine tRNA | Escherichia coli BW25113 | Bacteria | RF00005 | 70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA. | Electron microscopy | 2.2 | 2024-07-24 |
| 257 | 5IQR|1|5 | Transfer RNA | mRNA, P-site fMet-tRNA(fMet) | Escherichia coli | Bacteria | RF00005 | Structure of RelA bound to the 70S ribosome | Electron microscopy | 3 | 2016-05-04 |