RNA 3D Hub //

Equivalence class NR_3.0_35542.163 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
19GHE|1|Z (rep)Transfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)Electron microscopy1.87762025-03-26
28B0X|1|ZTransfer RNAmRNA, P-site tRNAEscherichia coli BBacteriaRF00005Translating 70S ribosome in the unrotated state (P and E, tRNAs)Electron microscopy1.55752022-11-30
39Q87|1|ZTransfer RNAmRNA, P-site tRNAEscherichia coli BBacteriaRF00005Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+Electron microscopy1.55772025-05-14
49GHG|1|FTransfer RNAE-site tRNA, mRNAEscherichia coli K-12BacteriaRF00005Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)Electron microscopy2.22762025-03-26
59T4R|1|ZTransfer RNAMethionine tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S initiation complex with a natural mRNAElectron microscopy2.3762026-02-25
69GHD|1|ZTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)Electron microscopy2.41762025-03-26
79JPP|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coli BW25113BacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Lys(mcm5s2U34) and mRNA(AAG)Electron microscopy2.26772026-03-11
88BIL|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.Electron microscopy2.04772023-08-16
99N2B|1|PtTransfer RNAN-formyl-methionine initiator tRNA (fMet-tRNAfMet), Synthetic messenger RNA (mRNA) 60 bp in lengthEscherichia coli K-12BacteriaRF00005Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)Electron microscopy2.2772025-03-19
109PJ7|1|CTransfer RNAinitiator tRNA Met (76-MER), mRNA 32MFEscherichia coliBacteriaRF00005C. acnes 70S ribosome bound to DoxycyclineElectron microscopy2.4752026-05-13
119G6J|1|PTTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNAElectron microscopy2.15762025-04-23
128G5Z|1|PtTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)Electron microscopy2.64772023-04-19
138EKC|1|xTransfer RNAM-F-Stop mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAElectron microscopy2.7762022-12-07
149GHB|1|ZTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)Electron microscopy2.21762025-03-26
159N2C|1|PtTransfer RNAN-formyl-methionine initiator tRNA (fMet-tRNAfMet), Synthetic messenger RNA (mRNA) 60 bp in lengthEscherichia coli K-12BacteriaRF00005Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)Electron microscopy2.4772025-03-19
169SYH|1|ZTransfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from deltaRlmE strainElectron microscopy1.89732026-03-18
179PJ9|1|CTransfer RNAinitiator tRNA Met, mRNA 32MFEscherichia coliBacteriaRF00005C. acnes 70S ribosome bound to MinocyclineElectron microscopy2.5752026-05-13
189PJ8|1|CTransfer RNAinitiator tRNA Met (76-MER), mRNA 32MFEscherichia coliBacteriaRF00005C. acnes 70S ribosome bound to SarecyclineElectron microscopy2.5762026-05-13
198BIM|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteElectron microscopy2.04772023-08-16
209JPM|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coli BW25113BacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Lys(mcm5s2U34) and mRNA(AAA)Electron microscopy2.43772026-03-11
215L4O|1|ATransfer RNAtRNA (76-MER)Escherichia coliBacteriaRF00005Structure of an E.coli initiator tRNAfMet A1-U72 variantX-ray diffraction2.8762017-03-01
229B4Z|1|AXTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)Electron microscopy2.2772025-08-27
239GHF|1|ZTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)Electron microscopy2.4762025-03-26
249PIJ|1|ZTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005E. coli 70S ribosome bound to MinocyclineElectron microscopy2.2752026-05-13
259DFC|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5772024-11-20
269PII|1|ZTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005E. coli 70S ribosome bound to SarecyclineElectron microscopy2.4752026-05-13
278G7P|1|xTransfer RNAM-I mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)Electron microscopy2.9762024-03-06
289D0I|1|1xTransfer RNAMF-mRNA, P-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with Se-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45762025-08-27
299T2K|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strain, PTC class 1Electron microscopy2.06182026-03-18
309GHA|1|8Transfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)Electron microscopy2.24772025-03-26
318UD7|1|1xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.55762024-02-21
329DFD|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin B, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.60A resolutionX-ray diffraction2.6772024-11-20
338G2A|1|1xTransfer RNAP-site Peptidyl-tRNA fMTHSMRC-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45772023-12-27
349D0J|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with BT-33, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5762024-11-20
355HCQ|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
368G2C|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.65772023-12-27
379DFC|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5772024-11-20
389JQ2|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coli BW25113BacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Lys(mcm5h2U34) and mRNA(AAG)Electron microscopy2.61772026-03-11
398VTU|1|1xTransfer RNAAminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4772024-08-07
409D0G|1|1xTransfer RNAMF-mRNA, P-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with O-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5762025-08-27
419B51|1|AXTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)Electron microscopy2.4772025-08-27
428G2A|1|2xTransfer RNAP-site Peptidyl-tRNA fMTHSMRC-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45772023-12-27
439GHH|1|FTransfer RNAE-site tRNA, mRNAEscherichia coli K-12BacteriaRF00005Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)Electron microscopy2.7762025-03-26
448G29|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.55772023-12-27
455MDV|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.97762016-12-14
468G7R|1|xTransfer RNAM-I mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)Electron microscopy2.8762024-03-06
478G29|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.55772023-12-27
488G2C|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.65772023-12-27
498UD7|1|2xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.55762024-02-21
509DFD|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin B, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.60A resolutionX-ray diffraction2.6772024-11-20
519D0H|1|1xTransfer RNAMF-mRNA, P-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with C-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5762025-08-27
528VTU|1|2xTransfer RNAAminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4772024-08-07
538SYL|1|xTransfer RNAM-F-Stop mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsElectron microscopy2.9762023-08-09
548VTX|1|1xTransfer RNAAminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4772024-08-07
557MT2|1|yTransfer RNAinitiator tRNA (Met), mRNAEscherichia coliBacteriaRF00005Mtb 70S initiation complexElectron microscopy2.76772022-02-02
567MT7|1|yTransfer RNAmRNA, tRNA (Met)Escherichia coliBacteriaRF00005Mtb 70S with P and E site tRNAsElectron microscopy2.71772022-02-02
578EMM|1|ZTransfer RNAMet-NH-tRNA, mRNAEscherichia coliBacteriaRF00005Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesElectron microscopy2.1762023-05-31
588UD6|1|1xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.7762024-02-21
596CAE|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-04-18
609H0L|1|ZTransfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF0000570S ribosome with cognate tRNASer3 bound to A-site AGC codonElectron microscopy2.49762025-05-28
619O3K|1|1xTransfer RNAMET-LYS-mRNA, P-site Peptidyl-tRNA fMAC-tRNAcys RNA-partEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolutionX-ray diffraction2.7772025-06-25
628VTV|1|1xTransfer RNAAminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.55772024-08-07
639GXX|1|ZTransfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF0000570S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codonElectron microscopy2.61762025-05-28
648VTX|1|2xTransfer RNAAminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4772024-08-07
657U2J|1|1xTransfer RNAMG-mRNA, P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.55772022-07-13
668G2B|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.55762023-12-27
678EKB|1|1xTransfer RNAM-Stop-mRNA, P-site deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-ray diffraction2.7762022-12-21
685IBB|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.96772016-05-25
698UD8|1|1xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.6762024-02-21
705HCQ|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
718VTV|1|2xTransfer RNAAminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.55772024-08-07
728BHP|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.37772023-08-16
738EKB|1|2xTransfer RNAM-Stop-mRNA, P-site deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-ray diffraction2.7762022-12-21
748UD8|1|2xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.6762024-02-21
757U2H|1|1xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-ray diffraction2.55772022-07-13
768UD6|1|2xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.7762024-02-21
778G2B|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.55762023-12-27
784Z8C|1|1xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.9762015-05-20
798UVR|1|1xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolutionX-ray diffraction2.6762024-08-07
809D0J|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with BT-33, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5762024-11-20
817U2J|1|2xTransfer RNAMG-mRNA, P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.55772022-07-13
827RQ8|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.5762021-10-13
839O3J|1|1xTransfer RNAMET-LYS-mRNA, P-site Peptidyl-tRNA fMRC-tRNAcys RNA-partEscherichia coliBacteriaRF00005Crystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolutionX-ray diffraction2.6772025-06-25
849O3H|1|1xTransfer RNAMET-LYS-mRNA, P-site Peptidyl-tRNA fMRC-tRNAcys RNA-partEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.65A resolutionX-ray diffraction2.65772025-06-25
855WFS|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy3772018-05-02
866CAE|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-04-18
875J4B|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762016-04-27
889T0Y|1|ZTransfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strainElectron microscopy1.87732026-03-18
896XHY|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.6762020-12-23
904Z8C|1|2xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.9762015-05-20
918UVS|1|1xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolutionX-ray diffraction2.75762024-08-07
925HCR|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
939D0I|1|2xTransfer RNAMF-mRNA, P-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with Se-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45762025-08-27
947ST6|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy3772022-02-23
957OSA|1|PSITTransfer RNAMRNA, Psite tRNA-PheEscherichia coliBacteriaRF00005Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction3772021-12-08
968EV7|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.89762023-08-09
976XHY|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.6762020-12-23
985IB7|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.99772016-05-25
995W4K|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762017-08-30
1009BDL|1|PTRNTransfer RNAtRNAfMetEscherichia coli K-12BacteriaRF0000580S ribosome with angiogeninElectron microscopy2.8772024-07-24
1018UVR|1|2xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolutionX-ray diffraction2.6762024-08-07
1029O3K|1|2xTransfer RNAMET-LYS-mRNA, P-site Peptidyl-tRNA fMAC-tRNAcys RNA-partEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolutionX-ray diffraction2.7772025-06-25
1035J4B|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762016-04-27
1046OF1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-ray diffraction2.8762019-04-17
1058CRX|1|CTransfer RNA32MF mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline boundElectron microscopy2.78762023-03-22
1067UNR|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)Electron microscopy2.9762022-06-22
1071VY4|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.6762014-08-20
1087UG7|1|DtTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BElectron microscopy2.58772022-05-18
1095WDT|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy3772018-04-25
1105J4C|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8762016-04-27
1117RQ8|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.5762021-10-13
1129T2Q|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strain, PTC class 7Electron microscopy2.08182026-03-18
1139O3L|1|1xTransfer RNAMET-PHE-mRNA, P-site Peptidyl-tRNA fMRC-tRNAcys RNA-partEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, deacylated A-site tRNAphe, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAphe at 2.75A resolutionX-ray diffraction2.75772025-06-25
1144W2I|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.7762014-10-15
1154WPO|1|BXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.8762015-01-28
1166OF1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-ray diffraction2.8762019-04-17
1174W2H|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.7762014-10-15
1186XHW|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.5762020-12-23
1198BGE|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.11772023-08-16
1207U2I|1|1xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.55772022-07-13
1217U2H|1|2xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-ray diffraction2.55772022-07-13
1225HCR|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
1235IBB|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.96762016-05-25
1245W4K|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762017-08-30
1258CVK|1|1xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5772022-10-19
1265WIS|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762018-02-14
1275HCP|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.89762016-04-06
1288EIU|1|ZTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005E. coli 70S ribosome with A-loop mutations U2554C and U2555CElectron microscopy2.24742023-02-01
1295HD1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.7762016-04-06
1307UNU|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)Electron microscopy2.9762022-06-22
1315J4C|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8762016-04-27
13210PX|1|1xTransfer RNAMET-PHE-mRNA, P-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45772026-03-11
1335HAU|1|1wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3762016-04-06
1349O3I|1|1xTransfer RNAMET-LYS-mRNA, P-site Peptidyl-tRNA fMRC-tRNAcys RNA-partEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolutionX-ray diffraction2.8772025-06-25
1354W2H|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.7762014-10-15
1369T2S|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strain, PTC class 9Electron microscopy2.07182026-03-18
1376XHV|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.4762020-12-23
1388EV7|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.89762023-08-09
1396ND5|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.6762019-03-20
1409CG6|1|ZTransfer RNAP-site tRNA-fMet M1Escherichia coliBacteriaRF0000570S initiation complex (tRNA-fMet M1 + GUG start codon)Electron microscopy2.61752024-09-18
1414WSD|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.95772015-06-10
1428CVK|1|2xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5772022-10-19
1434LNT|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.94772014-08-06
1444V8D|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction3772014-07-09
1454W2G|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.55762014-10-15
1464WSD|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.95772015-06-10
1478FTO|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S ribosome with an improved MS2 tag inserted in H98Electron microscopy1.85762023-08-02
1486XHW|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.5762020-12-23
1498G2D|1|1xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.7762023-12-27
1506WD0|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy3772020-07-01
1516XQD|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-ray diffraction2.8762020-08-05
1527UNV|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)Electron microscopy2.7762022-06-22
1534LNT|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.94772014-08-06
1545IB7|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.99772016-05-25
1558CDR|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.04772023-09-20
1567UNW|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)Electron microscopy2.6762022-06-22
1575HAU|1|2wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3762016-04-06
1589CG5|1|ZTransfer RNAP-site tRNA-fMet M1Escherichia coliBacteriaRF0000570S initiation complex (tRNA-fMet M1 + UUG start codon)Electron microscopy2.59752024-09-18
1599T2L|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strain, PTC class 2Electron microscopy2.07182026-03-18
1609D0G|1|2xTransfer RNAMF-mRNA, P-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with O-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5762025-08-27
1618BHL|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.21772023-08-16
1624W2G|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.55762014-10-15
1639AX7|1|ZTransfer RNAP-site tRNA-fMet M1Escherichia coliBacteriaRF0000570S initiation complex (tRNA-fMet M1 + CUG start codon)Electron microscopy2.63752024-09-18
1646XHV|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.4762020-12-23
1659O3L|1|2xTransfer RNAMET-PHE-mRNA, P-site Peptidyl-tRNA fMRC-tRNAcys RNA-partEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, deacylated A-site tRNAphe, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAphe at 2.75A resolutionX-ray diffraction2.75772025-06-25
1666XQD|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-ray diffraction2.8762020-08-05
1674V8D|1|ACTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction3772014-07-09
1688CVJ|1|1xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMSEAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4772022-10-19
1694Y4P|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.5762015-03-18
1706O97|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-ray diffraction2.75762019-04-17
1715HCP|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.89762016-04-06
1728EV6|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.946762023-08-09
1735DOY|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.6762015-12-30
1746XZB|1|f2Transfer RNADeacylated tRNAi(Met)Escherichia coli K-12BacteriaRF00005E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.54762020-11-04
1755WIT|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-02-14
1767U2I|1|2xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.55772022-07-13
1775VP2|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8762017-06-28
1785HD1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.7762016-04-06
1799O3H|1|2xTransfer RNAMET-LYS-mRNA, P-site Peptidyl-tRNA fMRC-tRNAcys RNA-partEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.65A resolutionX-ray diffraction2.65772025-06-25
1804Z3S|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.65762015-06-03
1816ND5|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.6762019-03-20
1829TEW|1|ZTransfer RNAfMet-Initiator P-site tRNA, mRNAEscherichia coli BW25113BacteriaRF00005DalDro bound to the initiating Escherichia coli 70S ribosomeElectron microscopy2.9772026-05-13
1839B00|1|1xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with berberine analog of chloramphenicol CAM-BER, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.80A resolutionX-ray diffraction2.8762024-08-07
1848CVJ|1|2xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMSEAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4772022-10-19
1858G2D|1|2xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.7762023-12-27
1864W2F|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.4762014-10-15
1878CVL|1|1xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMTHSMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.3772022-10-19
1885WIS|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762018-02-14
1898UVS|1|2xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolutionX-ray diffraction2.75762024-08-07
1908ZFG|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coli BW25113BacteriaRF00005Structure of the Bacterial Ribosome with hypoxia-induced rRNA modificationsElectron microscopy2.68772025-11-12
1914W2I|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.7762014-10-15
1929O3J|1|2xTransfer RNAMET-LYS-mRNA, P-site Peptidyl-tRNA fMRC-tRNAcys RNA-partEscherichia coliBacteriaRF00005Crystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolutionX-ray diffraction2.6772025-06-25
1938CVL|1|2xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMTHSMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.3772022-10-19
1947RQ9|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.6762021-10-13
1959D0H|1|2xTransfer RNAMF-mRNA, P-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with C-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5762025-08-27
1964V9R|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction3762014-07-09
1976WDE|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy3772020-07-01
1984Z3S|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.65762015-06-03
1998CGN|1|BbTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Non-rotated 80S S. cerevisiae ribosome with ligandsElectron microscopy2.28772023-09-20
2004W2F|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.4762014-10-15
2016O97|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-ray diffraction2.75762019-04-17
2027JQL|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction3762020-08-26
2034WPO|1|DXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.8762015-01-28
2041VY7|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.8762014-08-20
2057RQ9|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.6762021-10-13
2064V9R|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction3762014-07-09
2071VY5|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.55762014-08-20
2088EV6|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.946762023-08-09
2097TOO|1|APTNTransfer RNAtRNAfMetEscherichia coliBacteriaRF00005Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.7772022-05-25
2107JQL|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction3762020-08-26
2114Y4P|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.5762015-03-18
2121VY4|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.6762014-08-20
2135VP2|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8762017-06-28
2149RTU|1|vTransfer RNAmRNA, P/E-site tRNA(fMet)Escherichia coli K-12BacteriaRF00005Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)Electron microscopy3762025-10-01
2155DOY|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.6762015-12-30
2166UO1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.95762019-11-27
2174WQY|1|BXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.8762015-01-28
2186ND6|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.85762019-02-20
21910PX|1|2xTransfer RNAMET-PHE-mRNA, P-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45772026-03-11
2206UO1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.95762019-11-27
2215WIT|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-02-14
2227Y7C|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)Electron microscopy2.51772023-10-25
2236ORE|1|5Transfer RNAP-tRNA, RNA (5'-R(P*UP*UP*CP*UP*UP*CP*UP*AP*A)-3')Escherichia coliBacteriaRF00005Release complex 70SElectron microscopy2.9762019-06-19
2248IFB|1|6Transfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dibekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.43772024-02-14
2257K00|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.98762020-09-23
2266XZA|1|f2Transfer RNADeacylated tRNAi(Met)Escherichia coli K-12BacteriaRF00005E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.66762020-11-04
2271VY6|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.9762014-08-20
2289O3I|1|2xTransfer RNAMET-LYS-mRNA, P-site Peptidyl-tRNA fMRC-tRNAcys RNA-partEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolutionX-ray diffraction2.8772025-06-25
2295F8K|1|1xTransfer RNAmRNA, tRNAiMetEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-02-03
2308CEH|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.05772023-09-20
2317Y7G|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)Electron microscopy2.34772023-10-25
2324V51|1|CVTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.8772014-07-09
2339B00|1|2xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with berberine analog of chloramphenicol CAM-BER, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.80A resolutionX-ray diffraction2.8762024-08-07
2341VY6|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.9762014-08-20
2359QSJ|1|ZTransfer RNAermBL mRNA transcript, P-site tRNA-fMetEscherichia coli BBacteriaRF00005Cryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned (Body open) state.Electron microscopy2.62732026-02-18
2368BF7|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.33772023-08-16
2378G61|1|PtTransfer RNAmRNA, RNA (77-MER)Escherichia coliBacteriaRF00005mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)Electron microscopy2.94772023-04-19
2381VY5|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.55762014-08-20
2397MT3|1|yTransfer RNAmRNA, tRNA (Met)Escherichia coliBacteriaRF00005Mtb 70S with P/E tRNAElectron microscopy2.8772022-02-02
2407Y7E|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.41772023-10-25
2416ND6|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.85762019-02-20
2427OSM|1|PSITTransfer RNAFMET tRNA, MRNAEscherichia coliBacteriaRF00005Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction3772021-12-08
2439CG7|1|ZTransfer RNAP-site tRNA-fMet M1Escherichia coliBacteriaRF0000570S initiation complex (tRNA-fMet M1 + AUG start codon)Electron microscopy2.75752024-09-18
2449T1B|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-RlmE strain, PTC class 2Electron microscopy2.32182026-03-18
2457Y7F|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)Electron microscopy2.43772023-10-25
2469T8N|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-10 strain, PTC class 3Electron microscopy2.22182026-03-18
2479T1A|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-RlmE strain, PTC class 1Electron microscopy2.39182026-03-18
2484V51|1|AVTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.8772014-07-09
2499PIH|1|ZTransfer RNAmessenger RNA (mRNA), P-site tRNAEscherichia coliBacteriaRF00005E. coli 70S ribosome bound to DoxycyclineElectron microscopy2.4762026-05-13
2508EMM|1|YTransfer RNAMet-NH-tRNA, mRNAEscherichia coliBacteriaRF00005Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesElectron microscopy2.1762023-05-31
2519QQQ|1|ZTransfer RNAermBL mRNA transcript, P-site tRNA-fMetEscherichia coli BBacteriaRF00005Cryo-EM structure of SKM-70S ribosomal stalled complex in the major state (vacant A-site, canon)Electron microscopy2.26732026-02-18
2526XQE|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction3762020-08-05
2539O2Y|1|ZTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPylElectron microscopy2.14762026-03-18
2549T2N|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strain, PTC class 4Electron microscopy2.06182026-03-18
2557MT7|1|xTransfer RNAtRNA (Met)Escherichia coliBacteriaRF00005Mtb 70S with P and E site tRNAsElectron microscopy2.71772022-02-02
2566XQE|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction3762020-08-05
2578G6W|1|ZTransfer RNAmRNA, P-site fMet-tRNAfMetEscherichia coliBacteriaRF00005Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.02752023-04-05
2587M5D|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)Electron microscopy2.8762022-10-19
2595F8K|1|2xTransfer RNAmRNA, tRNAiMetEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-02-03
2609GUV|1|WTransfer RNAtRNA(fmet) P-siteEscherichia coli K-12BacteriaRF0000530S mRNA delivery complex (closed-head)Electron microscopy3772024-11-20
2614WQY|1|DXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.8762015-01-28
2624V7L|1|CXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction3772014-07-09
2639T1G|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-RlmE strain, PTC class 6Electron microscopy2.29182026-03-18
2649T2M|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strain, PTC class 3Electron microscopy2.06182026-03-18
2658G6Y|1|ZTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheElectron microscopy2.09752023-04-05
2669TEX|1|ZTransfer RNAfMet-Initiator P-tRNA, mRNAEscherichia coli BW25113BacteriaRF00005Dal2 bound to the Escherichia coli 70S ribosomeElectron microscopy2.54762026-05-13
2674V67|1|AYTransfer RNAMRNA, P AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
2688BGH|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.88772023-08-16
2697Y7H|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)Electron microscopy2.51772023-10-25
2709T6M|1|ZTransfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-10 strainElectron microscopy1.87732026-03-18
2717TOR|1|ETRNTransfer RNAtRNAfMet bound to E-siteEscherichia coli K-12BacteriaRF00005Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.9772022-05-25
2727Y7D|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)Electron microscopy2.58772023-10-25
2738BH4|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.62772023-08-16
2744V7L|1|AXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction3772014-07-09
2754V8B|1|ACTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
2769T1F|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-RlmE strain, PTC class 5Electron microscopy2.32182026-03-18
2774V67|1|CYTransfer RNAMRNA, P AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
2789GXX|1|VTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF0000570S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codonElectron microscopy2.61762025-05-28
2798BHN|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.85772023-08-16
2809T8T|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-10 strain, PTC class 9Electron microscopy2.23182026-03-18
2818CVM|1|CTransfer RNAInitiator fMet RNAEscherichia coliBacteriaRF00005Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined mapElectron microscopy2.66762023-03-15
2829BDL|1|ETRNTransfer RNAtRNAfMetEscherichia coli K-12BacteriaRF0000580S ribosome with angiogeninElectron microscopy2.8772024-07-24
2839T2P|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strain, PTC class 6Electron microscopy2.08182026-03-18
2848CF5|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.71772023-09-20
2859MQ4|1|5Transfer RNAP-tRNA, E-tRNAEscherichia coliBacteriaRF00005Damaged 70S ribosome with PrfH boundElectron microscopy2.78772025-02-05
2869GHG|1|DTransfer RNAE-site tRNAEscherichia coli K-12BacteriaRF00005Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)Electron microscopy2.22772025-03-26
2879FSF|1|4Transfer RNAtRNA Met initiatorEscherichia coliBacteriaRF00005Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNA with h44 in up positionElectron microscopy2.8772025-01-15
2881VY7|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.8762014-08-20
2899GUU|1|WTransfer RNAtRNA(fmet) P-siteEscherichia coli K-12BacteriaRF0000530S mRNA delivery complex (consensus)Electron microscopy2.5772024-11-20
2909H0L|1|VTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF0000570S ribosome with cognate tRNASer3 bound to A-site AGC codonElectron microscopy2.49762025-05-28
2919GHH|1|DTransfer RNAE-site tRNAEscherichia coli K-12BacteriaRF00005Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)Electron microscopy2.7772025-03-26
2928G6X|1|ZTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.31752023-03-22
2934V8B|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
2948EIU|1|YTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005E. coli 70S ribosome with A-loop mutations U2554C and U2555CElectron microscopy2.24742023-02-01
2959T19|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-RlmE strain, PTC class 0Electron microscopy2.41182026-03-18
2969GHC|1|ZTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)Electron microscopy2.79762025-03-26
2978IFC|1|6Transfer RNAmRNA, P-site tRNAf-MetEscherichia coliBacteriaRF00005Arbekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.9772024-02-14
2988BHJ|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.81772023-08-16
2995IQR|1|5Transfer RNAmRNA, P-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structure of RelA bound to the 70S ribosomeElectron microscopy3772016-05-04
3009T2R|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strain, PTC class 8Electron microscopy2.22182026-03-18
3019T8R|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-10 strain, PTC class 7Electron microscopy2.22182026-03-18
3029O2X|1|ZTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPylElectron microscopy2.29762026-03-18
3039FRA|1|4Transfer RNAtRNA initiator MetEscherichia coliBacteriaRF00005Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNAElectron microscopy2.8772025-01-15
3049AX8|1|yTransfer RNAP-site tRNA-fMet M1Escherichia coliBacteriaRF0000570S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)Electron microscopy2.6772024-09-18
3056WD0|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy3772020-07-01
3066WDE|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy3772020-07-01
3079G6J|1|ATTransfer RNAtRNA-fMetEscherichia coliBacteriaRF00005The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNAElectron microscopy2.15762025-04-23
3087TOR|1|PTRNTransfer RNAmRNA, tRNAfMet bound to E-siteEscherichia coli K-12BacteriaRF00005Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.9742022-05-25
3099T1J|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-RlmE strain, PTC class 9Electron microscopy2.23182026-03-18
3106AZ1|1|3Transfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinElectron microscopy2.7772017-12-06
3119T8Q|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-10 strain, PTC class 6Electron microscopy2.23182026-03-18
3125WDT|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy3772018-04-25
3139T1I|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-RlmE strain, PTC class 8Electron microscopy2.3182026-03-18
3149SYH|1|5Transfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from deltaRlmE strainElectron microscopy1.89712026-03-18
3154V8B|1|ADTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
3169FY0|1|4Transfer RNAtRNA met initiatorEscherichia coliBacteriaRF00005Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNAElectron microscopy2.9772025-01-15
3179T0Y|1|5Transfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strainElectron microscopy1.87712026-03-18
3189FRK|1|4Transfer RNAmRNA aEF1A, tRNA Met initiatorEscherichia coliBacteriaRF00005Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNAElectron microscopy3772025-01-15
3194V67|1|AZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
3207TOP|1|APTNTransfer RNAtRNAfMetEscherichia coliBacteriaRF00005Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.4772022-05-25
3218CG8|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.57772023-09-20
3225WFS|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy3772018-05-02
3236H4N|1|wTransfer RNAtRNAEscherichia coliBacteriaRF00005Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy3772018-09-05
3249SRO|1|ZTransfer RNAP/E-tRNA-fMetEscherichia coliBacteriaRF00005Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAsElectron microscopy2.6732026-02-18
3259G06|1|aTransfer RNAfMet-tRNA, mRNAEscherichia coliBacteriaRF00005Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complexElectron microscopy2.85682025-03-19
3269T1H|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-RlmE strain, PTC class 7Electron microscopy2.33182026-03-18
3279T1E|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-RlmE strain, PTC class 4Electron microscopy2.28182026-03-18
3284V67|1|CZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
3299FRL|1|4Transfer RNAmRNA, tRNA Met initiatorEscherichia coliBacteriaRF00005Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNA with h44 in up positionElectron microscopy2.97772025-01-15
3304V8B|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
3319FS6|1|4Transfer RNAtRNA met initiatorEscherichia coliBacteriaRF00005Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA with h44 in up positionElectron microscopy2.9772025-01-15
3327ST2|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)Electron microscopy2.9772022-02-23
3339T6M|1|5Transfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-10 strainElectron microscopy1.87712026-03-18
3349T2O|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-9 strain, PTC class 5Electron microscopy2.07182026-03-18
3357ST6|1|7Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy3772022-02-23
3368CGN|1|CcTransfer RNATransfer RNA fMetEscherichia coliBacteriaRF00005Non-rotated 80S S. cerevisiae ribosome with ligandsElectron microscopy2.28772023-09-20
3379MOR|1|5Transfer RNAP-tRNA, E-tRNAEscherichia coliBacteriaRF00005Damaged 70S ribosome with PrfH boundElectron microscopy2.65772025-02-05
3389T8S|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-10 strain, PTC class 8Electron microscopy2.22182026-03-18
3396Y69|1|wTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.86742020-07-01
3409T8P|1|ZTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E. coli 70S ribosome from delta-10 strain, PTC class 5Electron microscopy2.22182026-03-18
3419GUT|1|WTransfer RNAtRNA(fmet) P-siteEscherichia coli K-12BacteriaRF0000530S mRNA delivery complex (bS1 resolved)Electron microscopy2.8772024-11-20
3429MQ4|1|6Transfer RNAP-tRNA, E-tRNAEscherichia coliBacteriaRF00005Damaged 70S ribosome with PrfH boundElectron microscopy2.78772025-02-05
3439MOR|1|6Transfer RNAP-tRNA, E-tRNAEscherichia coliBacteriaRF00005Damaged 70S ribosome with PrfH boundElectron microscopy2.65772025-02-05
3446GSJ|1|2LTransfer RNARNA (27-MER), tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-ray diffraction2.96772018-07-04
3456GSJ|1|2KTransfer RNARNA (27-MER), tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-ray diffraction2.96772018-07-04
3468CCS|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF0000580S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complexElectron microscopy1.97772023-09-20
3478CIV|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.47772023-09-20
3482FMT|1|DTransfer RNAFORMYL-METHIONYL-TRNAFMET2synthetic constructSyntheticRF00005METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-ray diffraction2.8771999-07-29
3492FMT|1|CTransfer RNAFORMYL-METHIONYL-TRNAFMET2synthetic constructSyntheticRF00005METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-ray diffraction2.8771999-07-29
3506ZU1|1|AW+ 6ZU1|1|AX+ 6ZU1|1|AV+ 6ZU1|1|CN+ 6ZU1|1|CTTransfer RNA + Transfer RNAmRNA, Non-template DNA strand, Phe-NH-tRNA(Phe) A-site, Template DNA strand, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005 + RF00005E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy32402020-09-16
3518AYE|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S ribosome bound to thermorubin and fMet-tRNAElectron microscopy1.96762023-03-01
3526ZTO|1|AW+ 6ZTO|1|AX+ 6ZTO|1|AV+ 6ZTO|1|CN+ 6ZTO|1|CTTransfer RNA + Transfer RNAmRNA, Non-template DNA strand, Phe-NH-tRNA(Phe) A-site, Template DNA strand, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005 + RF00005E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy32402020-09-23
3536ZTP|1|AW+ 6ZTP|1|AX+ 6ZTP|1|AV+ 6ZTP|1|CN+ 6ZTP|1|CTTransfer RNA + Transfer RNAmRNA, Non-template DNA strand, Phe-NH-tRNA(Phe) A-site, Template DNA strand, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005 + RF00005E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy32402020-09-16
3548P2G|1|DTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric stateElectron microscopy2.02772024-05-01
3556XZ7|1|fTransfer RNADeacylated tRNAi(Met)Escherichia coliBacteriaRF00005E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.1762020-07-22
3568P2F|1|DTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateElectron microscopy2.44772024-05-01
3579FBV|1|ZTransfer RNAfMet-tRNAEscherichia coli BW25113BacteriaRF0000570S Escherichia coli ribosome with P-site initiatior tRNA.Electron microscopy2.4732024-06-26
3588P2F|1|FTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateElectron microscopy2.44762024-05-01
3598P2H|1|DTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric stateElectron microscopy2.49772024-05-01
3607SA4|1|5Transfer RNAmRNA, P-tRNA, E-tRNAEscherichia coliBacteriaRF00005Damaged 70S ribosome with PrfH boundElectron microscopy2.55772022-08-03
3617SA4|1|6Transfer RNAP-tRNA, E-tRNAEscherichia coliBacteriaRF00005Damaged 70S ribosome with PrfH boundElectron microscopy2.55772022-08-03
3627NWT|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)Electron microscopy2.66762021-12-15
3638CDL|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF0000580S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complexElectron microscopy2.72772023-09-20
3648ZFF|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coli BW25113BacteriaRF00005Structure of the Bacterial Ribosome without hypoxia-induced rRNA modificationsElectron microscopy2.59772025-11-12
3658QK7|1|5Transfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E167K RF2 on E. coli 70S release complex with UAAElectron microscopy2.77762024-09-25
3668P16|1|5Transfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E167K RF2 on E. coli 70S release complex with UGG (Structure I)Electron microscopy2.77762024-05-22
3678P18|1|5Transfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E167K RF2 on E. coli 70S release complex with UGG (Structure III)Electron microscopy2.77762024-05-22
3688P17|1|5Transfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E167K RF2 on E. coli 70S release complex with UGG (Structure II)Electron microscopy2.78762024-05-22
3698AM9|1|YTransfer RNAInitiator tRNA, mRNAEscherichia coli BW25113BacteriaRF00005Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosomeElectron microscopy2.8762023-03-08
3705AFI|1|vTransfer RNAmRNA, P-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.9772015-03-11
3715AFI|1|wTransfer RNAP-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.9772015-03-11
3728B7Y|1|nTransfer RNAmessenger RNA, P-tRNA fMetEscherichia coli K-12BacteriaRF00005Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.Electron microscopy3762023-01-25
3738R6C|1|5Transfer RNAN-Formylmethionine tRNAEscherichia coli BW25113BacteriaRF0000570S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.Electron microscopy2.222024-07-24
3748AP4|1|ZTransfer RNAP-tRNAEscherichia coli K-12BacteriaRF00005Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNAElectron microscopy3712022-11-16

Release history

Release4.39
Date2026-05-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
16AZ1|1|3Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinELECTRON MICROSCOPY2.777
26ORE|1|5Release complex 70SELECTRON MICROSCOPY2.976
37M5D|1|5Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)ELECTRON MICROSCOPY2.876
48AP4|1|ZStructure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNAELECTRON MICROSCOPY371
59T2O|1|ZE. coli 70S ribosome from delta-9 strain, PTC class 5ELECTRON MICROSCOPY2.0718
69T2P|1|ZE. coli 70S ribosome from delta-9 strain, PTC class 6ELECTRON MICROSCOPY2.0818
79T2M|1|ZE. coli 70S ribosome from delta-9 strain, PTC class 3ELECTRON MICROSCOPY2.0618
89T8Q|1|ZE. coli 70S ribosome from delta-10 strain, PTC class 6ELECTRON MICROSCOPY2.2318
99T2R|1|ZE. coli 70S ribosome from delta-9 strain, PTC class 8ELECTRON MICROSCOPY2.2218
109T1I|1|ZE. coli 70S ribosome from delta-RlmE strain, PTC class 8ELECTRON MICROSCOPY2.318
119T2S|1|ZE. coli 70S ribosome from delta-9 strain, PTC class 9ELECTRON MICROSCOPY2.0718
129T1F|1|ZE. coli 70S ribosome from delta-RlmE strain, PTC class 5ELECTRON MICROSCOPY2.3218
139T1H|1|ZE. coli 70S ribosome from delta-RlmE strain, PTC class 7ELECTRON MICROSCOPY2.3318
149T2L|1|ZE. coli 70S ribosome from delta-9 strain, PTC class 2ELECTRON MICROSCOPY2.0718
159T1A|1|ZE. coli 70S ribosome from delta-RlmE strain, PTC class 1ELECTRON MICROSCOPY2.3918
169T19|1|ZE. coli 70S ribosome from delta-RlmE strain, PTC class 0ELECTRON MICROSCOPY2.4118
179T1E|1|ZE. coli 70S ribosome from delta-RlmE strain, PTC class 4ELECTRON MICROSCOPY2.2818
189T2Q|1|ZE. coli 70S ribosome from delta-9 strain, PTC class 7ELECTRON MICROSCOPY2.0818
199T2N|1|ZE. coli 70S ribosome from delta-9 strain, PTC class 4ELECTRON MICROSCOPY2.0618
209T8R|1|ZE. coli 70S ribosome from delta-10 strain, PTC class 7ELECTRON MICROSCOPY2.2218
219T8P|1|ZE. coli 70S ribosome from delta-10 strain, PTC class 5ELECTRON MICROSCOPY2.2218
229T8T|1|ZE. coli 70S ribosome from delta-10 strain, PTC class 9ELECTRON MICROSCOPY2.2318
239T8N|1|ZE. coli 70S ribosome from delta-10 strain, PTC class 3ELECTRON MICROSCOPY2.2218
249T1B|1|ZE. coli 70S ribosome from delta-RlmE strain, PTC class 2ELECTRON MICROSCOPY2.3218
259T2K|1|ZE. coli 70S ribosome from delta-9 strain, PTC class 1ELECTRON MICROSCOPY2.0618
269T8S|1|ZE. coli 70S ribosome from delta-10 strain, PTC class 8ELECTRON MICROSCOPY2.2218
278G6X|1|ZStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.3175
288G6W|1|ZStructure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.0275
298G6Y|1|ZStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheELECTRON MICROSCOPY2.0975
309T4R|1|ZStaphylococcus aureus 70S initiation complex with a natural mRNAELECTRON MICROSCOPY2.376
318IFB|1|6Dibekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.4377
325AFI|1|v2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.977
335WDT|1|v70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY377
345WFS|1|v70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY377
359T6M|1|ZE. coli 70S ribosome from delta-10 strainELECTRON MICROSCOPY1.8773
369T0Y|1|ZE. coli 70S ribosome from delta-9 strainELECTRON MICROSCOPY1.8773
379SYH|1|ZE. coli 70S ribosome from deltaRlmE strainELECTRON MICROSCOPY1.8973
388B0X|1|ZTranslating 70S ribosome in the unrotated state (P and E, tRNAs)ELECTRON MICROSCOPY1.5575
399Q87|1|ZPrinciples of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+ELECTRON MICROSCOPY1.5577
408IFC|1|6Arbekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.977
419T1G|1|ZE. coli 70S ribosome from delta-RlmE strain, PTC class 6ELECTRON MICROSCOPY2.2918
429T1J|1|ZE. coli 70S ribosome from delta-RlmE strain, PTC class 9ELECTRON MICROSCOPY2.2318
439B4Z|1|AXE. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)ELECTRON MICROSCOPY2.277
449B51|1|AXE. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)ELECTRON MICROSCOPY2.477
458BHJ|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.8177
468BH4|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.6277
478BF7|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.3377
488BHN|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.8577
498BGH|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.8877
508BIM|1|4Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteELECTRON MICROSCOPY2.0477
518BIL|1|4Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.ELECTRON MICROSCOPY2.0477
528BHP|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.3777
538BGE|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.1177
548BHL|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.2177
559TEW|1|ZDalDro bound to the initiating Escherichia coli 70S ribosomeELECTRON MICROSCOPY2.977
569PIJ|1|ZE. coli 70S ribosome bound to MinocyclineELECTRON MICROSCOPY2.275
579PIH|1|ZE. coli 70S ribosome bound to DoxycyclineELECTRON MICROSCOPY2.476
589PJ8|1|CC. acnes 70S ribosome bound to SarecyclineELECTRON MICROSCOPY2.576
599PJ9|1|CC. acnes 70S ribosome bound to MinocyclineELECTRON MICROSCOPY2.575
609PII|1|ZE. coli 70S ribosome bound to SarecyclineELECTRON MICROSCOPY2.475
619PJ7|1|CC. acnes 70S ribosome bound to DoxycyclineELECTRON MICROSCOPY2.475
628CRX|1|CCutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline boundELECTRON MICROSCOPY2.7876
638CVM|1|CCutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined mapELECTRON MICROSCOPY2.6676
649QQQ|1|ZCryo-EM structure of SKM-70S ribosomal stalled complex in the major state (vacant A-site, canon)ELECTRON MICROSCOPY2.2673
659QSJ|1|ZCryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned (Body open) state.ELECTRON MICROSCOPY2.6273
669FBV|1|Z70S Escherichia coli ribosome with P-site initiatior tRNA.ELECTRON MICROSCOPY2.473
679AX7|1|Z70S initiation complex (tRNA-fMet M1 + CUG start codon)ELECTRON MICROSCOPY2.6375
689CG7|1|Z70S initiation complex (tRNA-fMet M1 + AUG start codon)ELECTRON MICROSCOPY2.7575
699CG5|1|Z70S initiation complex (tRNA-fMet M1 + UUG start codon)ELECTRON MICROSCOPY2.5975
709CG6|1|Z70S initiation complex (tRNA-fMet M1 + GUG start codon)ELECTRON MICROSCOPY2.6175
718B7Y|1|nCryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.ELECTRON MICROSCOPY376
728AM9|1|YCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosomeELECTRON MICROSCOPY2.876
737K00|1|ZStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.9876
749TEX|1|ZDal2 bound to the Escherichia coli 70S ribosomeELECTRON MICROSCOPY2.5476
757ST6|1|6Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY377
769N2C|1|PtImpacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)ELECTRON MICROSCOPY2.477
779N2B|1|PtImpacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)ELECTRON MICROSCOPY2.277
788ZFG|1|ZStructure of the Bacterial Ribosome with hypoxia-induced rRNA modificationsELECTRON MICROSCOPY2.6877
798ZFF|1|ZStructure of the Bacterial Ribosome without hypoxia-induced rRNA modificationsELECTRON MICROSCOPY2.5977
808AYE|1|ZE. coli 70S ribosome bound to thermorubin and fMet-tRNAELECTRON MICROSCOPY1.9676
819GHE|1|ZStaphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)ELECTRON MICROSCOPY1.8776
829GHD|1|ZEscherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)ELECTRON MICROSCOPY2.4176
839GHF|1|ZStaphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)ELECTRON MICROSCOPY2.476
849GHB|1|ZFusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)ELECTRON MICROSCOPY2.2176
859GHC|1|ZPre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)ELECTRON MICROSCOPY2.7976
868P18|1|5E167K RF2 on E. coli 70S release complex with UGG (Structure III)ELECTRON MICROSCOPY2.7776
878P16|1|5E167K RF2 on E. coli 70S release complex with UGG (Structure I)ELECTRON MICROSCOPY2.7776
888QK7|1|5E167K RF2 on E. coli 70S release complex with UAAELECTRON MICROSCOPY2.7776
898P17|1|5E167K RF2 on E. coli 70S release complex with UGG (Structure II)ELECTRON MICROSCOPY2.7876
909GXX|1|Z70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codonELECTRON MICROSCOPY2.6176
918FTO|1|ZE. coli 70S ribosome with an improved MS2 tag inserted in H98ELECTRON MICROSCOPY1.8576
929H0L|1|Z70S ribosome with cognate tRNASer3 bound to A-site AGC codonELECTRON MICROSCOPY2.4976
936ZTP|1|AW+ 6ZTP|1|AX+ 6ZTP|1|AV+ 6ZTP|1|CN+ 6ZTP|1|CTE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY3240
946ZU1|1|AW+ 6ZU1|1|AX+ 6ZU1|1|AV+ 6ZU1|1|CN+ 6ZU1|1|CTE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY3240
956ZTO|1|AW+ 6ZTO|1|AX+ 6ZTO|1|AV+ 6ZTO|1|CN+ 6ZTO|1|CTE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY3240
969GHH|1|FStaphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)ELECTRON MICROSCOPY2.776
979GHG|1|FStaphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)ELECTRON MICROSCOPY2.2276
988P2F|1|FStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateELECTRON MICROSCOPY2.4476
998SYL|1|xCryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsELECTRON MICROSCOPY2.976
1007Y7D|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)ELECTRON MICROSCOPY2.5877
1017Y7F|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)ELECTRON MICROSCOPY2.4377
1027Y7C|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)ELECTRON MICROSCOPY2.5177
1037Y7E|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.4177
1047Y7G|1|ZStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)ELECTRON MICROSCOPY2.3477
1057Y7H|1|ZStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)ELECTRON MICROSCOPY2.5177
1069JPM|1|ZStructure of the Bacterial Ribosome with human tRNA Lys(mcm5s2U34) and mRNA(AAA)ELECTRON MICROSCOPY2.4377
1079JQ2|1|ZStructure of the Bacterial Ribosome with human tRNA Lys(mcm5h2U34) and mRNA(AAG)ELECTRON MICROSCOPY2.6177
1089JPP|1|ZStructure of the Bacterial Ribosome with human tRNA Lys(mcm5s2U34) and mRNA(AAG)ELECTRON MICROSCOPY2.2677
1098EIU|1|ZE. coli 70S ribosome with A-loop mutations U2554C and U2555CELECTRON MICROSCOPY2.2474
1108EMM|1|ZComposite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesELECTRON MICROSCOPY2.176
1119O2X|1|ZStructure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPylELECTRON MICROSCOPY2.2976
1129O2Y|1|ZStructure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPylELECTRON MICROSCOPY2.1476
1139G6J|1|PTThe structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNAELECTRON MICROSCOPY2.1576
1148EKC|1|xEscherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAELECTRON MICROSCOPY2.776
1158G7P|1|xStructure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)ELECTRON MICROSCOPY2.976
1168G7R|1|xStructure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)ELECTRON MICROSCOPY2.876
1177UNR|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)ELECTRON MICROSCOPY2.976
1187UNU|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)ELECTRON MICROSCOPY2.976
1196XZ7|1|fE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.176
1206XZA|1|f2E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.6676
1215HCQ|1|1xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
1224Z8C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.976
1235HD1|1|1xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.776
1245HCR|1|1xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
1255HCP|1|1xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8976
1265HD1|1|2xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.776
1275HCR|1|2xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
1285HCP|1|2xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8976
1294Z8C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.976
1305HCQ|1|2xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
1315HAU|1|2wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION376
1325HAU|1|1wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION376
1335DOY|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.676
1344Z3S|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6576
1354W2I|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.776
1364WQY|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.876
1374WPO|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.876
1384V9R|1|AXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
1394W2G|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5576
1406XZB|1|f2E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.5476
1411VY5|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5576
1421VY4|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.676
1431VY6|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.976
1441VY7|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.876
1459O3K|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolutionX-RAY DIFFRACTION2.777
1469O3L|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, deacylated A-site tRNAphe, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAphe at 2.75A resolutionX-RAY DIFFRACTION2.7577
1478VTX|1|1xCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.477
1488VTX|1|2xCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.477
1498VTV|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5577
1508VTU|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.477
1519DFC|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.577
1529DFD|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin B, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.60A resolutionX-RAY DIFFRACTION2.677
1539DFD|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin B, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.60A resolutionX-RAY DIFFRACTION2.677
1549DFC|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.577
1558VTU|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.477
1568VTV|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5577
15710PX|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4577
15810PX|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4577
1599O3L|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, deacylated A-site tRNAphe, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAphe at 2.75A resolutionX-RAY DIFFRACTION2.7577
1606XHV|1|2xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.476
1616XHV|1|1xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.476
1626XHY|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.676
1637U2J|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5577
1647U2H|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-RAY DIFFRACTION2.5577
1657U2I|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5577
1666XHW|1|2xCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.576
1676XHW|1|1xCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.576
1686XHY|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.676
1698CVL|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.377
1708CVJ|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.477
1718CVK|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.577
1728CVK|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.577
1738CVJ|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.477
1748CVL|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.377
1758G2A|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4577
1768G2C|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6577
1778G29|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5577
1788G29|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5577
1798G2A|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4577
1808G2C|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6577
1817U2I|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5577
1827U2H|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-RAY DIFFRACTION2.5577
1837U2J|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5577
1848UD8|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.676
1858UD8|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.676
1868G2B|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5576
1878UD7|1|2xCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.5576
1888UD6|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.776
1898EKB|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-RAY DIFFRACTION2.776
1908EKB|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-RAY DIFFRACTION2.776
1918UD6|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.776
1928UD7|1|1xCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.5576
1938G2B|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5576
1948EV7|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8976
1958EV6|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94676
1969D0H|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with C-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.576
1979D0I|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with Se-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4576
1989D0G|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with O-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.576
1999D0J|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with BT-33, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.576
2009O3J|1|1xCrystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolutionX-RAY DIFFRACTION2.677
2019O3H|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.65A resolutionX-RAY DIFFRACTION2.6577
2029O3I|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolutionX-RAY DIFFRACTION2.877
2039B00|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with berberine analog of chloramphenicol CAM-BER, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.80A resolutionX-RAY DIFFRACTION2.876
2048UVR|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolutionX-RAY DIFFRACTION2.676
2059D0I|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with Se-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4576
2069D0H|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with C-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.576
2079D0G|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with O-cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.576
2089D0J|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with BT-33, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.576
2098UVR|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolutionX-RAY DIFFRACTION2.676
2109O3K|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolutionX-RAY DIFFRACTION2.777
2119O3I|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolutionX-RAY DIFFRACTION2.877
2129O3H|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.65A resolutionX-RAY DIFFRACTION2.6577
2139O3J|1|2xCrystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolutionX-RAY DIFFRACTION2.677
2149B00|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with berberine analog of chloramphenicol CAM-BER, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.80A resolutionX-RAY DIFFRACTION2.876
2158UVS|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolutionX-RAY DIFFRACTION2.7576
2167RQ8|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.576
2177RQ9|1|2xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.676
2185WIS|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
2195W4K|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
2204Y4P|1|1xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.576
2215J4C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.876
2225J4B|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
2234W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.476
2245WIT|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
2256OF1|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-RAY DIFFRACTION2.876
2266O97|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-RAY DIFFRACTION2.7576
2276CAE|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
2286ND6|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8576
2296ND5|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.676
2307RQ8|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.576
2317RQ9|1|1xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.676
2326XQD|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-RAY DIFFRACTION2.876
2336XQE|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION376
2344W2H|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.776
2356XQD|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-RAY DIFFRACTION2.876
2366XQE|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION376
2375F8K|1|2xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
2385F8K|1|1xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
2397JQL|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION376
2406UO1|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9576
2415VP2|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.876
2428UVS|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolutionX-RAY DIFFRACTION2.7576
2438G2D|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.776
2448G2D|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.776
2454V8B|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
2464V8B|1|ACCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
2476GSJ|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.9677
2485IB7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9977
2495IBB|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9677
2504V8D|1|ACStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
2514WSD|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9577
2524V8D|1|CCStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
2534WSD|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9577
2546GSJ|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.9677
2555IB7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9977
2565IBB|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9676
2576UO1|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9576
2587JQL|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION376
2595VP2|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.876
2604Z3S|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6576
2614W2I|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.776
2624V9R|1|CXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
2634W2H|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.776
2644WQY|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.876
2654WPO|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.876
2661VY4|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.676
2671VY5|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5576
2684W2G|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5576
2694W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.476
2701VY6|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.976
2715DOY|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.676
2726ND5|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.676
2738EV6|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94676
2748EV7|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8976
2754Y4P|1|2xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.576
2765WIS|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
2775W4K|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
2785J4C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.876
2795J4B|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
2806O97|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-RAY DIFFRACTION2.7576
2816CAE|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
2826ND6|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8576
2831VY7|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.876
2846OF1|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-RAY DIFFRACTION2.876
2855WIT|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
2864LNT|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
2874LNT|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
2884V67|1|AYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
2894V67|1|CYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
2906WDE|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY377
2916WD0|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY377
2927MT2|1|yMtb 70S initiation complexELECTRON MICROSCOPY2.7677
2937MT7|1|yMtb 70S with P and E site tRNAsELECTRON MICROSCOPY2.7177
2944V51|1|AVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.877
2954V51|1|CVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.877
2964V7L|1|AXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
2974V7L|1|CXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
2988G5Z|1|PtmRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)ELECTRON MICROSCOPY2.6477
2999BDL|1|PTRN80S ribosome with angiogeninELECTRON MICROSCOPY2.877
3008G61|1|PtmRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)ELECTRON MICROSCOPY2.9477
3019MQ4|1|5Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.7877
3027SA4|1|5Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.5577
3035IQR|1|5Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY377
3045MDV|1|5Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.9776
3057NWT|1|5Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)ELECTRON MICROSCOPY2.6676
3069MOR|1|5Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.6577
3078CGN|1|BbNon-rotated 80S S. cerevisiae ribosome with ligandsELECTRON MICROSCOPY2.2877
3088EIU|1|YE. coli 70S ribosome with A-loop mutations U2554C and U2555CELECTRON MICROSCOPY2.2474
3098EMM|1|YComposite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesELECTRON MICROSCOPY2.176
3109G6J|1|ATThe structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNAELECTRON MICROSCOPY2.1576
3117TOR|1|PTRNMammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.974
3126H4N|1|wStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY377
3136Y69|1|wCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.8674
3146WD0|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY377
3155WDT|1|w70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY377
3165AFI|1|w2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.977
3175WFS|1|w70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY377
3189FRL|1|4Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNA with h44 in up positionELECTRON MICROSCOPY2.9777
3199FRK|1|4Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNAELECTRON MICROSCOPY377
3209FRA|1|4Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNAELECTRON MICROSCOPY2.877
3219FSF|1|4Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNA with h44 in up positionELECTRON MICROSCOPY2.877
3229FS6|1|4Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA with h44 in up positionELECTRON MICROSCOPY2.977
3239FY0|1|4Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNAELECTRON MICROSCOPY2.977
3247ST6|1|7Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY377
3257ST2|1|6Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)ELECTRON MICROSCOPY2.977
3268P2F|1|DStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateELECTRON MICROSCOPY2.4477
3278P2H|1|DStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric stateELECTRON MICROSCOPY2.4977
3288P2G|1|DStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric stateELECTRON MICROSCOPY2.0277
3299GHA|1|8Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)ELECTRON MICROSCOPY2.2477
3307UG7|1|Dt70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BELECTRON MICROSCOPY2.5877
3318CIV|1|CcTranslocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.4777
3328CEH|1|CcTranslocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.0577
3338CDR|1|CcTranslocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.0477
3348CG8|1|CcTranslocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.5777
3357OSM|1|PSITIntermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION377
3368CF5|1|CcTranslocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.7177
3378CDL|1|Cc80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complexELECTRON MICROSCOPY2.7277
3388CCS|1|Cc80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complexELECTRON MICROSCOPY1.9777
3399RTU|1|vStructure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)ELECTRON MICROSCOPY376
3407OSA|1|PSITPre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION377
3419SRO|1|ZCryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAsELECTRON MICROSCOPY2.673
3427MT3|1|yMtb 70S with P/E tRNAELECTRON MICROSCOPY2.877
3437TOO|1|APTNYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.777
3447TOP|1|APTNYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.477
3457TOR|1|ETRNMammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.977
3469BDL|1|ETRN80S ribosome with angiogeninELECTRON MICROSCOPY2.877
3478CGN|1|CcNon-rotated 80S S. cerevisiae ribosome with ligandsELECTRON MICROSCOPY2.2877
3489G06|1|aStructure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complexELECTRON MICROSCOPY2.8568
3499GHH|1|DStaphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)ELECTRON MICROSCOPY2.777
3509GHG|1|DStaphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)ELECTRON MICROSCOPY2.2277
3516WDE|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY377
3524V8B|1|ADCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
3534V8B|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
3544V67|1|CZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
3554V67|1|AZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
3569MOR|1|6Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.6577
3579MQ4|1|6Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.7877
3587SA4|1|6Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.5577
3599T0Y|1|5E. coli 70S ribosome from delta-9 strainELECTRON MICROSCOPY1.8771
3609SYH|1|5E. coli 70S ribosome from deltaRlmE strainELECTRON MICROSCOPY1.8971
3619T6M|1|5E. coli 70S ribosome from delta-10 strainELECTRON MICROSCOPY1.8771
3627MT7|1|xMtb 70S with P and E site tRNAsELECTRON MICROSCOPY2.7177
3639GXX|1|V70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codonELECTRON MICROSCOPY2.6176
3649H0L|1|V70S ribosome with cognate tRNASer3 bound to A-site AGC codonELECTRON MICROSCOPY2.4976
3655L4O|1|AStructure of an E.coli initiator tRNAfMet A1-U72 variantX-RAY DIFFRACTION2.876
3669GUT|1|W30S mRNA delivery complex (bS1 resolved)ELECTRON MICROSCOPY2.877
3679GUV|1|W30S mRNA delivery complex (closed-head)ELECTRON MICROSCOPY377
3689GUU|1|W30S mRNA delivery complex (consensus)ELECTRON MICROSCOPY2.577
3697UNV|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)ELECTRON MICROSCOPY2.776
3707UNW|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)ELECTRON MICROSCOPY2.676
3719AX8|1|y70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)ELECTRON MICROSCOPY2.677
3722FMT|1|DMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.877
3732FMT|1|CMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.877
3748R6C|1|570S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.ELECTRON MICROSCOPY2.22

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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