#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18S1P|1|A (rep)Large subunit ribosomal RNA23S rRNABacillus subtilis subsp. subtilis str. 168BacteriaRF02541YlmH bound to PtRNA-50SElectron microscopy1.962024-06-12
28QCQ|1|ALarge subunit ribosomal RNA23S rRNABacillus subtilis subsp. subtilis str. 168BacteriaRF02541B. subtilis ApdA-stalled ribosomal complexElectron microscopy2.32024-03-20
38BUU|1|ALarge subunit ribosomal RNA23S rRNABacillus subtilis subsp. subtilis str. 168BacteriaRF02541ARE-ABCF VmlR2 bound to a 70S ribosomeElectron microscopy2.92023-04-05
47AQC|1|ALarge subunit ribosomal RNA23S ribosomal RNABacillus subtilis subsp. subtilis str. 168BacteriaRF02541Structure of the bacterial RQC complex (Decoding State)Electron microscopy2.992020-11-25
57AS8|1|ALarge subunit ribosomal RNA23S rRNABacillus subtilis subsp. subtilis str. 168BacteriaRF02541Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabOElectron microscopy2.92020-12-09
67SAE|1|ALarge subunit ribosomal RNARNA (2434-MER)Bacillus subtilisBacteriaRF0254144SR70P Class1 ribosomal particleElectron microscopy32022-03-02

Release history

Release3.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.3553.3563.3573.3583.3593.3603.3613.3623.3633.3643.3653.366
Date2024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-022024-10-092024-10-162024-10-232024-10-302024-11-062024-11-132024-11-202024-11-272024-12-042024-12-112024-12-18

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17AS8|1|ABacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabOELECTRON MICROSCOPY2.92812
28S1P|1|AYlmH bound to PtRNA-50SELECTRON MICROSCOPY1.962721
38QCQ|1|AB. subtilis ApdA-stalled ribosomal complexELECTRON MICROSCOPY2.32742
48BUU|1|AARE-ABCF VmlR2 bound to a 70S ribosomeELECTRON MICROSCOPY2.92850
57AQC|1|AStructure of the bacterial RQC complex (Decoding State)ELECTRON MICROSCOPY2.992820
67SAE|1|A44SR70P Class1 ribosomal particleELECTRON MICROSCOPY32434

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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