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Equivalence class NR_3.0_51266.5 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
12C4Q|1|R (rep)5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *PYO*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2ONE -5) COMPLEXX-ray diffraction2.38172005-11-07
22C4Y|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-ray diffraction2.68172006-01-05
32C4Q|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *PYO*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2ONE -5) COMPLEXX-ray diffraction2.38172005-11-07
42BU1|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (5BRU -5) COMPLEXX-ray diffraction2.2172005-08-18
52C4Y|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-ray diffraction2.68132006-01-05
62C4Z|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*SUR *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-ray diffraction2.6172006-01-05
72BU1|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (5BRU -5) COMPLEXX-ray diffraction2.2172005-08-18
82C51|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *GP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (G -5) COMPLEXX-ray diffraction2.8152006-01-05
92C4Z|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*SUR *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-ray diffraction2.6132006-01-05
102C50|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *AP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (A -5) COMPLEXX-ray diffraction2.65142006-01-05
112C51|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *GP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (G -5) COMPLEXX-ray diffraction2.8132006-01-05
122C50|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *AP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (A -5) COMPLEXX-ray diffraction2.65132006-01-05
131ZDH|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*U P*GP*U)-3')synthetic constructMS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.7131997-04-21
141ZDH|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*U P*GP*U)-3')synthetic constructMS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.7131997-04-21
152BQ5|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2 (N87AE89K mutant) - RNA hairpin complexX-ray diffraction2.91192006-03-22
162BNY|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2 (N87A mutant) - RNA hairpin complexX-ray diffraction3152006-03-22
172BQ5|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2 (N87AE89K mutant) - RNA hairpin complexX-ray diffraction2.91172006-03-22
182BNY|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2 (N87A mutant) - RNA hairpin complexX-ray diffraction3132006-03-22
191AQ4|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')Escherichia virus MS2STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-ray diffraction3161997-12-24
201AQ3|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')BACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-ray diffraction2.8161997-12-24
211AQ3|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')BACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-ray diffraction2.8121997-12-24
221AQ4|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')Escherichia virus MS2STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-ray diffraction3141997-12-24
232IZM|1|R5'-R(*AP*CP*AP*UP*GP*CP*GP*GP*AP*UP *CP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (C-10) COMPLEXX-ray diffraction2.7132007-07-03
242IZM|1|S5'-R(*AP*CP*AP*UP*GP*CP*GP*GP*AP*UP *CP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (C-10) COMPLEXX-ray diffraction2.7132007-07-03
251ZDI|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')RNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.7161997-04-21
261ZDK|1|RRNA (5'-R(P*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*UP*GP*U)-3')STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-ray diffraction2.86191998-12-07
271ZDK|1|SRNA (5'-R(P*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*UP*GP*U)-3')STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-ray diffraction2.86191998-12-07
281ZDI|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')RNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.7131997-04-21

Release history

Release3.3783.3793.3803.3813.3823.3833.384
Date2025-03-132025-03-192025-03-262025-04-022025-04-092025-04-162025-04-23

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
12IZM|1|RMS2-RNA HAIRPIN (C-10) COMPLEXX-RAY DIFFRACTION2.713
22IZM|1|SMS2-RNA HAIRPIN (C-10) COMPLEXX-RAY DIFFRACTION2.713
31ZDK|1|SSTRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-RAY DIFFRACTION2.8619
41ZDH|1|SMS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.713
51ZDI|1|SRNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.713
61AQ3|1|SBACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.812
71AQ4|1|SSTRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-RAY DIFFRACTION314
81AQ4|1|RSTRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-RAY DIFFRACTION316
91AQ3|1|RBACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.816
101ZDI|1|RRNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.716
111ZDH|1|RMS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.713
121ZDK|1|RSTRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-RAY DIFFRACTION2.8619
132C50|1|RMS2-RNA HAIRPIN (A -5) COMPLEXX-RAY DIFFRACTION2.6514
142C51|1|RMS2-RNA HAIRPIN (G -5) COMPLEXX-RAY DIFFRACTION2.815
152BNY|1|RMS2 (N87A mutant) - RNA hairpin complexX-RAY DIFFRACTION315
162C51|1|SMS2-RNA HAIRPIN (G -5) COMPLEXX-RAY DIFFRACTION2.813
172C4Q|1|RMS2-RNA HAIRPIN (2ONE -5) COMPLEXX-RAY DIFFRACTION2.3817
182BU1|1|RMS2-RNA HAIRPIN (5BRU -5) COMPLEXX-RAY DIFFRACTION2.217
192BU1|1|SMS2-RNA HAIRPIN (5BRU -5) COMPLEXX-RAY DIFFRACTION2.217
202C4Q|1|SMS2-RNA HAIRPIN (2ONE -5) COMPLEXX-RAY DIFFRACTION2.3817
212C50|1|SMS2-RNA HAIRPIN (A -5) COMPLEXX-RAY DIFFRACTION2.6513
222BNY|1|SMS2 (N87A mutant) - RNA hairpin complexX-RAY DIFFRACTION313
232C4Z|1|SMS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-RAY DIFFRACTION2.613
242C4Y|1|SMS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-RAY DIFFRACTION2.6813
252BQ5|1|SMS2 (N87AE89K mutant) - RNA hairpin complexX-RAY DIFFRACTION2.9117
262C4Z|1|RMS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-RAY DIFFRACTION2.617
272C4Y|1|RMS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-RAY DIFFRACTION2.6817
282BQ5|1|RMS2 (N87AE89K mutant) - RNA hairpin complexX-RAY DIFFRACTION2.9119

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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