#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
18QYX|1|B2 (rep)5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human 60S ribosomal subunitElectron microscopy1.781192024-12-11
28GLP|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)Electron microscopy1.671202023-04-19
39O3W|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human 80S ribosome bound to IDB-001 stalled on MYC nascent chainElectron microscopy1.91202026-03-04
49TV2|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000180S ribosomes from primary B-cells infected with delta v-snoRNA1 EBVElectron microscopy2.11192026-07-01
59C3H|1|L95S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.Electron microscopy21202024-12-04
68A3D|1|B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human mature large subunit of the ribosome with eIF6 and homoharringtonine boundElectron microscopy1.671202023-03-08
79TT7|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000180S ribosome of WT EBV infected human B-cellsElectron microscopy2.21192026-07-22
89I2D|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001NMT1-NAC bound human RNC with 10 amino acid ARF1-linkerElectron microscopy2.191202026-02-04
98QFD|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001UFL1 E3 ligase bound 60S ribosomeElectron microscopy2.21192024-02-21
108YOO|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with 100 um TigecyclineElectron microscopy21202024-07-10
119O3Y|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chainElectron microscopy2.21202026-03-04
128QOI|1|L75S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNAElectron microscopy1.91202024-06-12
139O3V|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human 80S ribosome stalled on MYC nascent chainElectron microscopy2.21202026-03-04
148JDK|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.261202023-12-06
159SPF|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINEElectron microscopy2.41192026-01-21
169S3D|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001NAC bound human RNC with 58 amino acid ARF1-linkerElectron microscopy2.321202026-02-18
178G5Y|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)Electron microscopy2.291202023-04-19
189SPI|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINEElectron microscopy2.41192026-01-21
198YOP|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with 4 um TigecyclineElectron microscopy2.21202024-07-10
209S3B|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1Electron microscopy2.381202026-02-18
219S3C|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2Electron microscopy2.421202026-02-18
229MNC|1|L95S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human 80S ribosome bound to small molecule SW393071Electron microscopy2.331202026-06-24
238JDJ|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)Electron microscopy2.51202023-12-06
249QLO|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001NMT1-NAC bound human RNC with full length ARF1 - State 1Electron microscopy2.471202026-02-18
259PBE|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human 80S ribosome (composite map)Electron microscopy2.191202025-12-24
268JDL|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)Electron microscopy2.421202023-12-06
278K2C|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with TigecyclineElectron microscopy2.41202024-07-10
289GUL|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complexElectron microscopy2.21202025-09-24
298XSX|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2Electron microscopy2.41202024-07-10
309QLQ|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001NMT1-NAC bound human RNC with full length ARF1 - alternative StateElectron microscopy2.571202026-02-18
317XNY|1|L25S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellsElectron microscopy2.51202023-04-05
329PKD|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ CHX and HHT treated 80S consensus ribosomeElectron microscopy2.421202026-07-15
338G60|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)Electron microscopy2.541202023-04-19
3429IX|1|DB5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.Electron microscopy2.21192026-09-30
359VXN|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAsElectron microscopy2.511202026-07-22
366ZMI|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexElectron microscopy2.61202020-08-19
378FLE|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State L2)Electron microscopy2.481202023-07-12
388JDM|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)Electron microscopy2.671202023-12-06
399RUC|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)Electron microscopy2.51192026-05-13
409P8B|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human eEF1A-A/T-P-E state 80S ribosomeElectron microscopy2.481202025-12-24
417OW7|1|B5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001EIF6-bound large subunit of the human ribosomeElectron microscopy2.21202022-10-05
4229IW|1|DB5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.Electron microscopy1.771192026-09-30
437XNX|1|L25S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellsElectron microscopy2.71202023-04-05
449T6D|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001NAA40-NAC bound human 80S (combined translation states)Electron microscopy2.671202026-09-30
458G5Z|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)Electron microscopy2.641202023-04-19
469P7D|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating class4 80S ribosomeElectron microscopy2.571202025-12-24
478FLB|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State K2)Electron microscopy2.551202023-07-12
489FQZ|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1Electron microscopy2.851192026-01-14
499P7E|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating class5 80S ribosomeElectron microscopy2.591202025-12-24
508IFD|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Dibekacin-added human 80S ribosomeElectron microscopy2.591202024-02-14
518FL7|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State J2)Electron microscopy2.551202023-07-12
528FLD|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State L1)Electron microscopy2.581202023-07-12
538FLF|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State L3)Electron microscopy2.651202023-07-12
549QLP|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001NMT1-NAC bound human RNC with full length ARF1 - State 2Electron microscopy2.751202026-02-18
556ZM7|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexElectron microscopy2.71202020-07-29
569WW4|1|AB5S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001human 80S ribosome non-rotated stateElectron microscopy2.481202026-09-16
578FL6|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State J1)Electron microscopy2.621202023-07-12
588FLA|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State K1)Electron microscopy2.631202023-07-12
598IFE|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Arbekacin-added human 80S ribosomeElectron microscopy2.571202024-02-14
608OJ5|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)Electron microscopy2.91202024-02-21
619RPV|1|M75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of the ZAK-bound human disomeElectron microscopy2.351202025-12-10
629P7O|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human AT-P-Z state ribosomeElectron microscopy2.651202025-12-24
637F5S|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human delta-METTL18 60S ribosomeElectron microscopy2.721202022-06-22
649P73|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human eEF2-A/P-P/E state 80S ribosomeElectron microscopy2.661202025-12-24
656Y6X|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Tetracenomycin X bound to the human ribosomeElectron microscopy2.81202020-07-08
669P9J|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human 60S ribosomeElectron microscopy2.871202025-12-24
679RUA|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)Electron microscopy2.91192026-06-03
688FLC|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State K3)Electron microscopy2.761202023-07-12
698FL9|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State J3)Electron microscopy2.751202023-07-12
709P7Y|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human A-P-E state 80S ribosomeElectron microscopy2.751202025-12-24
7129IZ|1|BB5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Dormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2Electron microscopy2.081192026-09-30
729P7C|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating class3 80S ribosomeElectron microscopy2.781202025-12-24
739RPV|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of the ZAK-bound human disomeElectron microscopy2.351202025-12-10
748G6J|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)Electron microscopy2.81202023-04-19
759PA7|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human 80S consensus ribosome with EBP1Electron microscopy2.671202025-12-24
769P9I|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human unrotated hibernating without CCDC124 state 80S ribosomeElectron microscopy2.771202025-12-24
779P7A|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human hibernating class2 80S ribosomeElectron microscopy2.811202025-12-24
789P7X|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human A-P-Z state 80S ribosomeElectron microscopy2.831202025-12-24
799T6C|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001NAA40-NAC bound active human 80SElectron microscopy2.911202026-09-30
808FL3|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State I2)Electron microscopy2.531172023-07-12
819B0P|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human Hibernating class1 80S ribosomeElectron microscopy2.821202025-03-19
829P7K|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human post eEF1A-A/T-P-E state 80S ribosomeElectron microscopy2.81202025-12-24
839P76|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human eEF1A-A/T-P state 80S ribosomeElectron microscopy2.831202025-12-24
849P9H|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human unrotated hibernating with CCDC124 state 80S ribosomeElectron microscopy2.841202025-12-24
859P7N|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Post-eEF1A-A/T-P-Z state 80S ribosomeElectron microscopy2.831202025-12-24
868G61|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)Electron microscopy2.941202023-04-19
876QZP|1|L75S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.91202019-04-24
889P72|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human P-E state 80S ribosomeElectron microscopy2.81202025-12-24
899RU8|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)Electron microscopy31192026-06-03
908FL2|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State I1)Electron microscopy2.671172023-07-12
919GMO|1|B5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16Electron microscopy2.591182024-10-02
929I2E|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001NMT1-NAC bound human ribosome (combined translational states)Electron microscopy2.951202026-02-04
936ZME|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexElectron microscopy31202020-08-12
949P78|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosomeElectron microscopy2.91202025-12-24
958XSY|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)Electron microscopy31202024-07-10
969WW5|1|AB5S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001human 80S ribosome rotated stateElectron microscopy2.691202026-09-16
979RU9|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)Electron microscopy2.971202026-06-03
989P7W|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human A-P state 80S ribosomeElectron microscopy2.931202025-12-24
999GY4|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)Electron microscopy31202025-05-14
1009P6Z|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human P-Z state 80S ribosomeElectron microscopy2.971202025-12-24
1019RU7|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)Electron microscopy31192026-05-13
1026Y2L|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in POST stateElectron microscopy31202020-04-15
10329IY|1|CB5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human monosomes, focus on 60S subunit; control.Electron microscopy2.361192026-09-30
1049M0P|1|L75S ribosomal RNA5S ribosomal RNA|HOMO SAPIENSHomo sapiensEukaryaRF00001Cryo-EM structure of human 80S ribosome in complex with montanineElectron microscopy2.781202026-01-14
1056XA1|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of a drug-like compound stalled human translation termination complexElectron microscopy2.81202020-10-07
1068IDT|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State GElectron microscopy2.81202023-08-09
10722TU|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human 80S ribosome in complex with DHX29Electron microscopy31202026-04-01
1089P9K|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human 60S ribosome with EIF6Electron microscopy2.961202025-12-24
1099P7L|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Post-eEF1A-AT-P state 80S ribosomeElectron microscopy2.921202025-12-24
1107QVP|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy31202022-10-12
1118FL4|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State I3)Electron microscopy2.891172023-07-12
1129KZU|1|L75S ribosomal RNA5S_ribosomal_RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3Electron microscopy31202025-12-03
1139P8H|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human A/P-P/E state 80S ribosomeElectron microscopy2.981202025-12-24
11428LN|1|B75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001XBP1u-stalled RPL4 RNC in complex with NACElectron microscopy2.71202026-06-10
1157QVP|1|L95S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy31202022-10-12
1168INF|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State F'Electron microscopy31202023-08-09
1178IDY|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State FElectron microscopy31202023-08-09
1189QER|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human pre-60S - State 1AElectron microscopy2.91202026-09-30
1199WW6|1|AB5S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001human 80S ribosome delta eL41 non-rotated stateElectron microscopy2.831202026-09-23
1208RL2|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human pre-60S - State 5Electron microscopy2.841202025-01-15
1218FL0|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nucleolar pre-60S ribosomal subunit (State H)Electron microscopy2.911202023-07-12
1229WW7|1|AB5S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001human 80S ribosome delta eL41 rotated stateElectron microscopy2.911202026-09-30
1236Z6N|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)Electron microscopy2.91202020-07-29
1246Z6L|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human CCDC124 bound to 80S ribosomesElectron microscopy31202020-07-29
1259RG7|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In vitro reconstituted NAA40-NAC bound 80SElectron microscopy2.721202026-06-17

Release history

Release4.60
Date2026-10-07

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
19TV2|1|L780S ribosomes from primary B-cells infected with delta v-snoRNA1 EBVELECTRON MICROSCOPY2.1119
29TT7|1|L780S ribosome of WT EBV infected human B-cellsELECTRON MICROSCOPY2.2119
38QFD|1|7UFL1 E3 ligase bound 60S ribosomeELECTRON MICROSCOPY2.2119
48JDL|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)ELECTRON MICROSCOPY2.42120
58JDK|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.26120
68JDJ|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)ELECTRON MICROSCOPY2.5120
78JDM|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)ELECTRON MICROSCOPY2.67120
89RU8|1|L7WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)ELECTRON MICROSCOPY3119
99RU7|1|L7WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)ELECTRON MICROSCOPY3119
109M0P|1|L7Cryo-EM structure of human 80S ribosome in complex with montanineELECTRON MICROSCOPY2.78120
117QVP|1|L9Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY3120
129RPV|1|L7Structure of the ZAK-bound human disomeELECTRON MICROSCOPY2.35120
138IFD|1|1BDibekacin-added human 80S ribosomeELECTRON MICROSCOPY2.59120
148IFE|1|1BArbekacin-added human 80S ribosomeELECTRON MICROSCOPY2.57120
1522TU|1|L7Human 80S ribosome in complex with DHX29ELECTRON MICROSCOPY3120
167QVP|1|L7Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY3120
176Y2L|1|L7Structure of human ribosome in POST stateELECTRON MICROSCOPY3120
189QLQ|1|L7NMT1-NAC bound human RNC with full length ARF1 - alternative StateELECTRON MICROSCOPY2.57120
199I2D|1|L7NMT1-NAC bound human RNC with 10 amino acid ARF1-linkerELECTRON MICROSCOPY2.19120
209S3B|1|L7NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1ELECTRON MICROSCOPY2.38120
219S3C|1|L7NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2ELECTRON MICROSCOPY2.42120
229S3D|1|L7NAC bound human RNC with 58 amino acid ARF1-linkerELECTRON MICROSCOPY2.32120
239QLO|1|L7NMT1-NAC bound human RNC with full length ARF1 - State 1ELECTRON MICROSCOPY2.47120
249QLP|1|L7NMT1-NAC bound human RNC with full length ARF1 - State 2ELECTRON MICROSCOPY2.75120
259T6C|1|L7NAA40-NAC bound active human 80SELECTRON MICROSCOPY2.91120
269RUC|1|L7WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)ELECTRON MICROSCOPY2.5119
277F5S|1|L7human delta-METTL18 60S ribosomeELECTRON MICROSCOPY2.72120
289I2E|1|L7NMT1-NAC bound human ribosome (combined translational states)ELECTRON MICROSCOPY2.95120
298G5Y|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)ELECTRON MICROSCOPY2.29120
308GLP|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)ELECTRON MICROSCOPY1.67120
318G60|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)ELECTRON MICROSCOPY2.54120
328G61|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)ELECTRON MICROSCOPY2.94120
338G5Z|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)ELECTRON MICROSCOPY2.64120
348G6J|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)ELECTRON MICROSCOPY2.8120
359C3H|1|L9Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.ELECTRON MICROSCOPY2120
369FQZ|1|L7CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1ELECTRON MICROSCOPY2.85119
379SPF|1|L7CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINEELECTRON MICROSCOPY2.4119
389O3V|1|L7Human 80S ribosome stalled on MYC nascent chainELECTRON MICROSCOPY2.2120
399O3W|1|L7Human 80S ribosome bound to IDB-001 stalled on MYC nascent chainELECTRON MICROSCOPY1.9120
409O3Y|1|L7Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chainELECTRON MICROSCOPY2.2120
418QOI|1|L7Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNAELECTRON MICROSCOPY1.9120
429WW4|1|ABhuman 80S ribosome non-rotated stateELECTRON MICROSCOPY2.48120
439WW5|1|ABhuman 80S ribosome rotated stateELECTRON MICROSCOPY2.69120
449VXN|1|L7Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAsELECTRON MICROSCOPY2.51120
459P73|1|L7In situ human eEF2-A/P-P/E state 80S ribosomeELECTRON MICROSCOPY2.66120
469P8H|1|L7In situ human A/P-P/E state 80S ribosomeELECTRON MICROSCOPY2.98120
479B0P|1|L7In situ human Hibernating class1 80S ribosomeELECTRON MICROSCOPY2.82120
489P78|1|L7In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosomeELECTRON MICROSCOPY2.9120
499P7E|1|L7In situ human Hibernating class5 80S ribosomeELECTRON MICROSCOPY2.59120
509P7D|1|L7In situ human Hibernating class4 80S ribosomeELECTRON MICROSCOPY2.57120
519P7Y|1|L7In situ human A-P-E state 80S ribosomeELECTRON MICROSCOPY2.75120
529P7A|1|L7In situ human hibernating class2 80S ribosomeELECTRON MICROSCOPY2.81120
539P7C|1|L7In situ human Hibernating class3 80S ribosomeELECTRON MICROSCOPY2.78120
549PKD|1|L7In situ CHX and HHT treated 80S consensus ribosomeELECTRON MICROSCOPY2.42120
559P7O|1|L7In situ human AT-P-Z state ribosomeELECTRON MICROSCOPY2.65120
569P7N|1|L7In situ human Post-eEF1A-A/T-P-Z state 80S ribosomeELECTRON MICROSCOPY2.83120
579P9H|1|L7In situ human unrotated hibernating with CCDC124 state 80S ribosomeELECTRON MICROSCOPY2.84120
589P9I|1|L7In situ human unrotated hibernating without CCDC124 state 80S ribosomeELECTRON MICROSCOPY2.77120
599P8B|1|L7In situ human eEF1A-A/T-P-E state 80S ribosomeELECTRON MICROSCOPY2.48120
609P7K|1|L7In situ human post eEF1A-A/T-P-E state 80S ribosomeELECTRON MICROSCOPY2.8120
619P9K|1|L7In situ human 60S ribosome with EIF6ELECTRON MICROSCOPY2.96120
629P9J|1|L7In situ human 60S ribosomeELECTRON MICROSCOPY2.87120
639PBE|1|L7In situ human 80S ribosome (composite map)ELECTRON MICROSCOPY2.19120
649PA7|1|L7In situ human 80S consensus ribosome with EBP1ELECTRON MICROSCOPY2.67120
659P72|1|L7In situ human P-E state 80S ribosomeELECTRON MICROSCOPY2.8120
669P76|1|L7In situ human eEF1A-A/T-P state 80S ribosomeELECTRON MICROSCOPY2.83120
679P7L|1|L7In situ human Post-eEF1A-AT-P state 80S ribosomeELECTRON MICROSCOPY2.92120
689P6Z|1|L7In situ human P-Z state 80S ribosomeELECTRON MICROSCOPY2.97120
699P7W|1|L7In situ human A-P state 80S ribosomeELECTRON MICROSCOPY2.93120
709P7X|1|L7In situ human A-P-Z state 80S ribosomeELECTRON MICROSCOPY2.83120
716Y6X|1|L7Tetracenomycin X bound to the human ribosomeELECTRON MICROSCOPY2.8120
728XSX|1|L7Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2ELECTRON MICROSCOPY2.4120
739T6D|1|L7NAA40-NAC bound human 80S (combined translation states)ELECTRON MICROSCOPY2.67120
748A3D|1|BHuman mature large subunit of the ribosome with eIF6 and homoharringtonine boundELECTRON MICROSCOPY1.67120
758K2C|1|L7Cryo-EM structure of the human 80S ribosome with TigecyclineELECTRON MICROSCOPY2.4120
768XSY|1|L7Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)ELECTRON MICROSCOPY3120
778YOP|1|L7Cryo-EM structure of the human 80S ribosome with 4 um TigecyclineELECTRON MICROSCOPY2.2120
788YOO|1|L7Cryo-EM structure of the human 80S ribosome with 100 um TigecyclineELECTRON MICROSCOPY2120
799RG7|1|L7In vitro reconstituted NAA40-NAC bound 80SELECTRON MICROSCOPY2.72120
809SPI|1|L7CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINEELECTRON MICROSCOPY2.4119
818QYX|1|B2Human 60S ribosomal subunitELECTRON MICROSCOPY1.78119
8229IZ|1|BBDormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2ELECTRON MICROSCOPY2.08119
8329IW|1|DBHuman monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.ELECTRON MICROSCOPY1.77119
8429IX|1|DBHuman monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.ELECTRON MICROSCOPY2.2119
8529IY|1|CBHuman monosomes, focus on 60S subunit; control.ELECTRON MICROSCOPY2.36119
869RU9|1|L7RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)ELECTRON MICROSCOPY2.97120
879GMO|1|BeIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16ELECTRON MICROSCOPY2.59118
889GY4|1|760S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)ELECTRON MICROSCOPY3120
899RPV|1|M7Structure of the ZAK-bound human disomeELECTRON MICROSCOPY2.35120
908OJ5|1|760S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)ELECTRON MICROSCOPY2.9120
919MNC|1|L9Human 80S ribosome bound to small molecule SW393071ELECTRON MICROSCOPY2.33120
927XNY|1|L2High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellsELECTRON MICROSCOPY2.5120
937XNX|1|L2High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellsELECTRON MICROSCOPY2.7120
949RUA|1|L7RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)ELECTRON MICROSCOPY2.9119
956ZME|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY3120
966Z6L|1|L7Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY3120
976Z6N|1|L7Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.9120
986ZM7|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.7120
996ZMI|1|L7SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.6120
1006XA1|1|L7Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.8120
1016QZP|1|L7High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.9120
1027OW7|1|BEIF6-bound large subunit of the human ribosomeELECTRON MICROSCOPY2.2120
10328LN|1|B7XBP1u-stalled RPL4 RNC in complex with NACELECTRON MICROSCOPY2.7120
1049KZU|1|L7Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3ELECTRON MICROSCOPY3120
1059WW6|1|ABhuman 80S ribosome delta eL41 non-rotated stateELECTRON MICROSCOPY2.83120
1069WW7|1|ABhuman 80S ribosome delta eL41 rotated stateELECTRON MICROSCOPY2.91120
1078FL9|1|L4Human nuclear pre-60S ribosomal subunit (State J3)ELECTRON MICROSCOPY2.75120
1088FL6|1|L4Human nuclear pre-60S ribosomal subunit (State J1)ELECTRON MICROSCOPY2.62120
1098FL7|1|L4Human nuclear pre-60S ribosomal subunit (State J2)ELECTRON MICROSCOPY2.55120
1108FLC|1|L4Human nuclear pre-60S ribosomal subunit (State K3)ELECTRON MICROSCOPY2.76120
1118FLA|1|L4Human nuclear pre-60S ribosomal subunit (State K1)ELECTRON MICROSCOPY2.63120
1128FLB|1|L4Human nuclear pre-60S ribosomal subunit (State K2)ELECTRON MICROSCOPY2.55120
1138FLF|1|L4Human nuclear pre-60S ribosomal subunit (State L3)ELECTRON MICROSCOPY2.65120
1148FLE|1|L4Human nuclear pre-60S ribosomal subunit (State L2)ELECTRON MICROSCOPY2.48120
1158FLD|1|L4Human nuclear pre-60S ribosomal subunit (State L1)ELECTRON MICROSCOPY2.58120
1169GUL|1|L7Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complexELECTRON MICROSCOPY2.2120
1178INF|1|5human nuclear pre-60S ribosomal particle - State F'ELECTRON MICROSCOPY3120
1188IDY|1|5human nuclear pre-60S ribosomal particle - State FELECTRON MICROSCOPY3120
1198IDT|1|5human nuclear pre-60S ribosomal particle - State GELECTRON MICROSCOPY2.8120
1208FL2|1|L4Human nuclear pre-60S ribosomal subunit (State I1)ELECTRON MICROSCOPY2.67117
1218FL3|1|L4Human nuclear pre-60S ribosomal subunit (State I2)ELECTRON MICROSCOPY2.53117
1228FL4|1|L4Human nuclear pre-60S ribosomal subunit (State I3)ELECTRON MICROSCOPY2.89117
1238RL2|1|L7Human pre-60S - State 5ELECTRON MICROSCOPY2.84120
1249QER|1|L7Human pre-60S - State 1AELECTRON MICROSCOPY2.9120
1258FL0|1|L4Human nucleolar pre-60S ribosomal subunit (State H)ELECTRON MICROSCOPY2.91120

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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