NR_3.0_56726.103

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	5J7L\|1\|AA (rep)	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	1534	2016-07-27
2	4YBB\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	1534	2015-03-18
3	4WOI\|1\|DA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	1539	2015-08-05
4	4WOI\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	1538	2015-08-05
5	4V9P\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
6	4V9O\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
7	5J7L\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	1533	2016-07-27
8	4V9P\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
9	4V9P\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
10	4V9P\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
11	4V9O\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
12	5J91\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	1534	2016-07-06
13	6I7V\|1\|AA	Small subunit ribosomal RNA	16S ribosmal RNA	Escherichia coli	Bacteria	RF00177	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	1533	2018-12-05
14	4V9O\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
15	4U27\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	1538	2014-07-30
16	4YBB\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	1533	2015-03-18
17	4U1U\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	1538	2014-07-30
18	4U26\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	1538	2014-07-30
19	4V9D\|1\|AA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	1538	2014-07-09
20	6I7V\|1\|BA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	1533	2018-12-05
21	4U24\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	1538	2014-07-30
22	4U25\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	1538	2014-07-30
23	4V9D\|1\|BA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	1539	2014-07-09
24	4U27\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	1539	2014-07-30
25	4V9O\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
26	4U20\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	1538	2014-07-30
27	4U1U\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	1539	2014-07-30
28	4U1V\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	1538	2014-07-30
29	4U25\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	1539	2014-07-30
30	4U26\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	1539	2014-07-30
31	5J91\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	1533	2016-07-06
32	4U24\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	1539	2014-07-30
33	4U1V\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	1539	2014-07-30
34	4U20\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	1539	2014-07-30
35	5J5B\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	1534	2016-07-27
36	5J5B\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	1533	2016-07-27
37	8B0X\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli B	Bacteria	RF00177	Translating 70S ribosome in the unrotated state (P and E, tRNAs)	Electron microscopy	1.55	1500	2022-11-30
38	8AYE\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome bound to thermorubin and fMet-tRNA	Electron microscopy	1.96	1519	2023-03-01
39	7K00\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	Electron microscopy	1.98	1519	2020-09-23
40	8G6W\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe	Electron microscopy	2.02	1519	2023-04-05
41	8EMM\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates	Electron microscopy	2.1	1519	2023-05-31
42	8EIU\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome with A-loop mutations U2554C and U2555C	Electron microscopy	2.24	1519	2023-02-01
43	7S1H\|1\|C	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Wild-type Escherichia coli ribosome with antibiotic linezolid	Electron microscopy	2.35	1540	2021-11-17
44	7N1P\|1\|16	Small subunit ribosomal RNA	16S rRNA, mRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	Electron microscopy	2.33	1542	2021-07-14
45	8AKN\|1\|B	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00177	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome	Electron microscopy	2.3	1519	2023-03-08
46	7S1K\|1\|C	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid	Electron microscopy	2.42	1540	2022-01-19
47	7S1J\|1\|C	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Wild-type Escherichia coli ribosome with antibiotic radezolid	Electron microscopy	2.47	1540	2022-03-02
48	7S1I\|1\|C	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid	Electron microscopy	2.48	1540	2022-03-02
49	7S1G\|1\|C	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	wild-type Escherichia coli stalled ribosome with antibiotic linezolid	Electron microscopy	2.48	1540	2021-11-17
50	7O1A\|1\|AA	Small subunit ribosomal RNA	Ribosomal RNA 16S	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.4	1534	2021-09-01
51	7N2U\|1\|16	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	Electron microscopy	2.53	1534	2021-07-14
52	7N2V\|1\|16	Small subunit ribosomal RNA	16S rRNA, mRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	Electron microscopy	2.54	1534	2021-07-14
53	7SA4\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.55	1534	2022-08-03
54	6YSS\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	Electron microscopy	2.6	1540	2020-08-19
55	7UG7\|1\|16	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	Electron microscopy	2.58	1514	2022-05-18
56	6XZB\|1\|A1	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.54	1523	2020-11-04
57	7NWT\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	Electron microscopy	2.66	1534	2021-12-15
58	7N30\|1\|16	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	Electron microscopy	2.66	1526	2021-07-14
59	7N31\|1\|16	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a post-translocation (POST) conformation	Electron microscopy	2.69	1533	2021-07-14
60	7ZTA\|1\|16S1	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli K-12	Bacteria	RF00177	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide	Electron microscopy	2.7	1534	2023-04-12
61	6TC3\|1\|16S1	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	Electron microscopy	2.7	1534	2020-01-01
62	6TBV\|1\|16S1	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	Electron microscopy	2.7	1534	2020-01-01
63	8EKC\|1\|a	Small subunit ribosomal RNA	16S Ribosomal RNA	Escherichia coli	Bacteria	RF00177	Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA	Electron microscopy	2.7	1528	2022-12-07
64	7N2C\|1\|16	Small subunit ribosomal RNA	16S rRNA, Chains: mR	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	Electron microscopy	2.72	1534	2021-07-14
65	6XZA\|1\|A1	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.66	1523	2020-11-04
66	8CGJ\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Streptomycin bound to the 30S body	Electron microscopy	1.79	1130	2023-07-26
67	7M5D\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)	Electron microscopy	2.8	1534	2022-10-19
68	6Y69\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	1539	2020-07-01
69	7O1C\|1\|AA	Small subunit ribosomal RNA	Ribosomal RNA 16S	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	Electron microscopy	2.6	1534	2021-09-01
70	8AM9\|1\|B	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00177	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome	Electron microscopy	2.8	1519	2023-03-08
71	7NSO\|1\|a	Small subunit ribosomal RNA	16S rRNA (1540-MER)	Escherichia coli	Bacteria	RF00177	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	Electron microscopy	2.9	1540	2021-07-14
72	7ST2\|1\|3	Small subunit ribosomal RNA	16S rRNA, mRNA	Escherichia coli K-12	Bacteria	RF00177	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	Electron microscopy	2.9	1539	2022-02-23
73	5AFI\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	1539	2015-03-11
74	7BOH\|1\|A	Small subunit ribosomal RNA	RNA (1527-MER)	Escherichia coli K-12	Bacteria	RF00177	Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)	Electron microscopy	2.82	1527	2021-12-08
75	7OT5\|1\|2	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	CspA-70 cotranslational folding intermediate 1	Electron microscopy	2.9	1534	2022-01-19
76	7OTC\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli BL21(DE3)	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B	Electron microscopy	2.9	1533	2022-05-11
77	7B5K\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	Electron microscopy	2.9	1533	2021-05-26
78	5NWY\|1\|0	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	1539	2017-07-19
79	7OIZ\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	Electron microscopy	2.9	1519	2021-09-15
80	7P3K\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)	Electron microscopy	2.9	1519	2021-10-27
81	7ST6\|1\|3	Small subunit ribosomal RNA	16S rRNA, mRNA	Escherichia coli K-12	Bacteria	RF00177	Pre translocation, non-rotated 70S ribosome (Structure I)	Electron microscopy	3	1539	2022-02-23
82	6WD0\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	1539	2020-07-01
83	7TOS\|1\|16S	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20	Electron microscopy	2.9	1532	2022-05-25
84	6H4N\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	1534	2018-09-05
85	6WDE\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	1539	2020-07-01
86	6ORE\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Release complex 70S	Electron microscopy	2.9	1534	2019-06-19
87	8GHU\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Methyltransferase RmtC bound to the 30S ribosomal subunit	Electron microscopy	3	1532	2023-04-12
88	5WDT\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	1540	2018-04-25
89	5WFS\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	1540	2018-05-02
90	7O19\|1\|AA	Small subunit ribosomal RNA	Ribosomal RNA 16S	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.9	1534	2021-09-01
91	7OIF\|1\|2	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	CspA-27 cotranslational folding intermediate 2	Electron microscopy	3	1534	2022-01-19
92	7OII\|1\|2	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	CspA-70 cotranslational folding intermediate 2	Electron microscopy	3	1534	2022-01-19
93	8B7Y\|1\|C	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.	Electron microscopy	3	1519	2023-01-25
94	7BOE\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)	Electron microscopy	2.9	1534	2021-12-08
95	5MDV\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	1534	2016-12-14
96	7Q4K\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain	Electron microscopy	3	1534	2022-11-16
97	7NAX\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)	Electron microscopy	2.96	1526	2021-12-08
98	6ZTP\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	1533	2020-09-16
99	6ZU1\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	1533	2020-09-16
100	6ZTO\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	1533	2020-09-23
101	8CGU\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Gentamicin bound to the 30S body	Electron microscopy	1.89	1047	2023-07-26
102	8CAI\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Streptomycin and Hygromycin B bound to the 30S body	Electron microscopy	2.08	1114	2023-07-26
103	7NAR\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)	Electron microscopy	3	1534	2021-12-08
104	7OE0\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	E. coli pre-30S delta rbfA ribosomal subunit class F	Electron microscopy	2.69	1510	2021-07-14
105	8CEP\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Round2 30S head (no antibiotic)	Electron microscopy	2.04	1046	2023-07-19
106	8CGR\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Apramycin bound to the 30S body	Electron microscopy	2.12	1060	2023-07-26
107	5IQR\|1\|2	Small subunit ribosomal RNA	SSU rRNA	Escherichia coli	Bacteria	RF00177	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	1533	2016-05-04
108	7BOG\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state E (body domain)	Electron microscopy	2.75	1071	2021-07-07
109	7BOD\|1\|A	Small subunit ribosomal RNA	16S rRNA (body domain of 30S subunit)	Escherichia coli K-12	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state M (body domain)	Electron microscopy	2.88	1078	2021-07-07
110	7BOF\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state I (body domain)	Electron microscopy	2.92	1070	2021-07-07
111	7BOI\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)	Electron microscopy	2.98	1078	2021-07-07
112	8CF1\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Tetracycline bound to the 30S head	Electron microscopy	1.82	485	2023-07-26
113	7PJS\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	Electron microscopy	2.35	662	2021-10-20
114	8CGI\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Pentacycline TP038 bound to the 30S head	Electron microscopy	1.89	460	2023-07-26
115	8CAZ\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	empty 30S head	Electron microscopy	2.11	460	2023-07-26
116	7OI0\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	E.coli delta rbfA pre-30S ribosomal subunit class D	Electron microscopy	2.76	963	2021-07-14
117	7AF8\|1\|1	Small subunit ribosomal RNA	16SrRNA (head domain of the 30S ribosome	Escherichia coli	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state E (head domain)	Electron microscopy	2.75	456	2021-07-07
118	7AF3\|1\|1	Small subunit ribosomal RNA	16S rRNA (head)	Escherichia coli	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state M (head domain)	Electron microscopy	2.82	456	2021-07-07
119	7AF5\|1\|1	Small subunit ribosomal RNA	16SrRNA (head domain of the 30S ribosome)	Escherichia coli	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state I (head domain)	Electron microscopy	2.96	456	2021-07-07
120	7AFA\|1\|1	Small subunit ribosomal RNA	16SrRNA (head domain of the 30S ribosome)	Escherichia coli	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state F (head domain)	Electron microscopy	2.95	456	2021-07-07

Release history

Release	3.293
Date	2023-07-26

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.0_56726.103	NR_3.0_56726.102	3.293	(113) 4U1U\|1\|AA, 4U1U\|1\|CA, 4U1V\|1\|AA, 4U1V\|1\|CA, 4U20\|1\|AA, 4U20\|1\|CA, 4U24\|1\|AA, 4U24\|1\|CA, 4U25\|1\|AA, 4U25\|1\|CA, 4U26\|1\|AA, 4U26\|1\|CA, 4U27\|1\|AA, 4U27\|1\|CA, 4V9D\|1\|AA, 4V9D\|1\|BA, 4V9O\|1\|BA, 4V9O\|1\|DA, 4V9O\|1\|FA, 4V9O\|1\|HA, 4V9P\|1\|BA, 4V9P\|1\|DA, 4V9P\|1\|FA, 4V9P\|1\|HA, 4WOI\|1\|AA, 4WOI\|1\|DA, 4YBB\|1\|AA, 4YBB\|1\|BA, 5AFI\|1\|a, 5IQR\|1\|2, 5J5B\|1\|AA, 5J5B\|1\|BA, 5J7L\|1\|AA, 5J7L\|1\|BA, 5J91\|1\|AA, 5J91\|1\|BA, 5MDV\|1\|2, 5NWY\|1\|0, 5WDT\|1\|a, 5WFS\|1\|a, 6H4N\|1\|a, 6I7V\|1\|AA, 6I7V\|1\|BA, 6ORE\|1\|2, 6TBV\|1\|16S1, 6TC3\|1\|16S1, 6WD0\|1\|3, 6WDE\|1\|3, 6XZA\|1\|A1, 6XZB\|1\|A1, 6Y69\|1\|a, 6YSS\|1\|a, 6ZTO\|1\|AA, 6ZTP\|1\|AA, 6ZU1\|1\|AA, 7AF3\|1\|1, 7AF5\|1\|1, 7AF8\|1\|1, 7AFA\|1\|1, 7B5K\|1\|a, 7BOD\|1\|A, 7BOE\|1\|A, 7BOF\|1\|A, 7BOG\|1\|A, 7BOH\|1\|A, 7BOI\|1\|A, 7K00\|1\|A, 7M5D\|1\|2, 7N1P\|1\|16, 7N2C\|1\|16, 7N2U\|1\|16, 7N2V\|1\|16, 7N30\|1\|16, 7N31\|1\|16, 7NAR\|1\|A, 7NAX\|1\|A, 7NSO\|1\|a, 7NWT\|1\|2, 7O19\|1\|AA, 7O1A\|1\|AA, 7O1C\|1\|AA, 7OE0\|1\|A, 7OI0\|1\|A, 7OIF\|1\|2, 7OII\|1\|2, 7OIZ\|1\|A, 7OT5\|1\|2, 7OTC\|1\|a, 7P3K\|1\|A, 7PJS\|1\|a, 7Q4K\|1\|AA, 7S1G\|1\|C, 7S1H\|1\|C, 7S1I\|1\|C, 7S1J\|1\|C, 7S1K\|1\|C, 7SA4\|1\|2, 7ST2\|1\|3, 7ST6\|1\|3, 7TOS\|1\|16S, 7UG7\|1\|16, 7ZTA\|1\|16S1, 8AKN\|1\|B, 8AM9\|1\|B, 8AYE\|1\|A, 8B0X\|1\|A, 8B7Y\|1\|C, 8CEP\|1\|A, 8EIU\|1\|A, 8EKC\|1\|a, 8EMM\|1\|A, 8G6W\|1\|A, 8GHU\|1\|a	(7) 8CAI\|1\|A, 8CAZ\|1\|A, 8CF1\|1\|A, 8CGI\|1\|A, 8CGJ\|1\|A, 8CGR\|1\|A, 8CGU\|1\|A	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.0_56726.103	NR_3.0_56726.104	3.294	(120) 4U1U\|1\|AA, 4U1U\|1\|CA, 4U1V\|1\|AA, 4U1V\|1\|CA, 4U20\|1\|AA, 4U20\|1\|CA, 4U24\|1\|AA, 4U24\|1\|CA, 4U25\|1\|AA, 4U25\|1\|CA, 4U26\|1\|AA, 4U26\|1\|CA, 4U27\|1\|AA, 4U27\|1\|CA, 4V9D\|1\|AA, 4V9D\|1\|BA, 4V9O\|1\|BA, 4V9O\|1\|DA, 4V9O\|1\|FA, 4V9O\|1\|HA, 4V9P\|1\|BA, 4V9P\|1\|DA, 4V9P\|1\|FA, 4V9P\|1\|HA, 4WOI\|1\|AA, 4WOI\|1\|DA, 4YBB\|1\|AA, 4YBB\|1\|BA, 5AFI\|1\|a, 5IQR\|1\|2, 5J5B\|1\|AA, 5J5B\|1\|BA, 5J7L\|1\|AA, 5J7L\|1\|BA, 5J91\|1\|AA, 5J91\|1\|BA, 5MDV\|1\|2, 5NWY\|1\|0, 5WDT\|1\|a, 5WFS\|1\|a, 6H4N\|1\|a, 6I7V\|1\|AA, 6I7V\|1\|BA, 6ORE\|1\|2, 6TBV\|1\|16S1, 6TC3\|1\|16S1, 6WD0\|1\|3, 6WDE\|1\|3, 6XZA\|1\|A1, 6XZB\|1\|A1, 6Y69\|1\|a, 6YSS\|1\|a, 6ZTO\|1\|AA, 6ZTP\|1\|AA, 6ZU1\|1\|AA, 7AF3\|1\|1, 7AF5\|1\|1, 7AF8\|1\|1, 7AFA\|1\|1, 7B5K\|1\|a, 7BOD\|1\|A, 7BOE\|1\|A, 7BOF\|1\|A, 7BOG\|1\|A, 7BOH\|1\|A, 7BOI\|1\|A, 7K00\|1\|A, 7M5D\|1\|2, 7N1P\|1\|16, 7N2C\|1\|16, 7N2U\|1\|16, 7N2V\|1\|16, 7N30\|1\|16, 7N31\|1\|16, 7NAR\|1\|A, 7NAX\|1\|A, 7NSO\|1\|a, 7NWT\|1\|2, 7O19\|1\|AA, 7O1A\|1\|AA, 7O1C\|1\|AA, 7OE0\|1\|A, 7OI0\|1\|A, 7OIF\|1\|2, 7OII\|1\|2, 7OIZ\|1\|A, 7OT5\|1\|2, 7OTC\|1\|a, 7P3K\|1\|A, 7PJS\|1\|a, 7Q4K\|1\|AA, 7S1G\|1\|C, 7S1H\|1\|C, 7S1I\|1\|C, 7S1J\|1\|C, 7S1K\|1\|C, 7SA4\|1\|2, 7ST2\|1\|3, 7ST6\|1\|3, 7TOS\|1\|16S, 7UG7\|1\|16, 7ZTA\|1\|16S1, 8AKN\|1\|B, 8AM9\|1\|B, 8AYE\|1\|A, 8B0X\|1\|A, 8B7Y\|1\|C, 8CAI\|1\|A, 8CAZ\|1\|A, 8CEP\|1\|A, 8CF1\|1\|A, 8CGI\|1\|A, 8CGJ\|1\|A, 8CGR\|1\|A, 8CGU\|1\|A, 8EIU\|1\|A, 8EKC\|1\|a, 8EMM\|1\|A, 8G6W\|1\|A, 8GHU\|1\|a	(0)	(3) 8CA7\|1\|A, 8CF8\|1\|A, 8FTO\|1\|A

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	8GHU\|1\|a	Methyltransferase RmtC bound to the 30S ribosomal subunit	ELECTRON MICROSCOPY	3	1532
2	7BOF\|1\|A	Bacterial 30S ribosomal subunit assembly complex state I (body domain)	ELECTRON MICROSCOPY	2.92	1070
3	7NAX\|1\|A	Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)	ELECTRON MICROSCOPY	2.96	1526
4	7OE0\|1\|A	E. coli pre-30S delta rbfA ribosomal subunit class F	ELECTRON MICROSCOPY	2.69	1510
5	7OI0\|1\|A	E.coli delta rbfA pre-30S ribosomal subunit class D	ELECTRON MICROSCOPY	2.76	963
6	7BOG\|1\|A	Bacterial 30S ribosomal subunit assembly complex state E (body domain)	ELECTRON MICROSCOPY	2.75	1071
7	7BOH\|1\|A	Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)	ELECTRON MICROSCOPY	2.82	1527
8	7BOD\|1\|A	Bacterial 30S ribosomal subunit assembly complex state M (body domain)	ELECTRON MICROSCOPY	2.88	1078
9	7BOE\|1\|A	Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)	ELECTRON MICROSCOPY	2.9	1534
10	7BOI\|1\|A	Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)	ELECTRON MICROSCOPY	2.98	1078
11	7NAR\|1\|A	Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)	ELECTRON MICROSCOPY	3	1534
12	7PJS\|1\|a	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	ELECTRON MICROSCOPY	2.35	662
13	7UG7\|1\|16	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	ELECTRON MICROSCOPY	2.58	1514
14	7OTC\|1\|a	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B	ELECTRON MICROSCOPY	2.9	1533
15	7N2C\|1\|16	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	ELECTRON MICROSCOPY	2.72	1534
16	4V9P\|1\|FA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
17	4V9O\|1\|HA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
18	4V9P\|1\|HA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
19	4V9P\|1\|BA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
20	4V9P\|1\|DA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
21	4V9O\|1\|DA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
22	5J7L\|1\|AA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	1534
23	5J91\|1\|AA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1534
24	5J5B\|1\|AA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	1534
25	4YBB\|1\|AA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1534
26	6I7V\|1\|AA	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	1533
27	4U24\|1\|AA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1538
28	4U26\|1\|AA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1538
29	4U25\|1\|AA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1538
30	4U27\|1\|AA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1538
31	4U1V\|1\|AA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1538
32	4U20\|1\|AA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1538
33	4U1U\|1\|AA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1538
34	4V9O\|1\|FA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
35	4V9O\|1\|BA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
36	4V9D\|1\|AA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1538
37	7N30\|1\|16	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	ELECTRON MICROSCOPY	2.66	1526
38	7N2U\|1\|16	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	ELECTRON MICROSCOPY	2.53	1534
39	7N2V\|1\|16	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	ELECTRON MICROSCOPY	2.54	1534
40	5J7L\|1\|BA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	1533
41	5J91\|1\|BA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1533
42	5J5B\|1\|BA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	1533
43	4YBB\|1\|BA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1533
44	4U1U\|1\|CA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1539
45	4U20\|1\|CA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1539
46	4U1V\|1\|CA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1539
47	4U27\|1\|CA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1539
48	4U25\|1\|CA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1539
49	4U26\|1\|CA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1539
50	4U24\|1\|CA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1539
51	6I7V\|1\|BA	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	1533
52	4V9D\|1\|BA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1539
53	5IQR\|1\|2	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	1533
54	7SA4\|1\|2	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.55	1534
55	6YSS\|1\|a	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	ELECTRON MICROSCOPY	2.6	1540
56	8CEP\|1\|A	Round2 30S head (no antibiotic)	ELECTRON MICROSCOPY	2.04	1046
57	8CGR\|1\|A	Apramycin bound to the 30S body	ELECTRON MICROSCOPY	2.12	1060
58	8CGU\|1\|A	Gentamicin bound to the 30S body	ELECTRON MICROSCOPY	1.89	1047
59	8B7Y\|1\|C	Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.	ELECTRON MICROSCOPY	3	1519
60	8AYE\|1\|A	E. coli 70S ribosome bound to thermorubin and fMet-tRNA	ELECTRON MICROSCOPY	1.96	1519
61	8AKN\|1\|B	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome	ELECTRON MICROSCOPY	2.3	1519
62	8CAI\|1\|A	Streptomycin and Hygromycin B bound to the 30S body	ELECTRON MICROSCOPY	2.08	1114
63	7M5D\|1\|2	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)	ELECTRON MICROSCOPY	2.8	1534
64	7S1J\|1\|C	Wild-type Escherichia coli ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.47	1540
65	7S1K\|1\|C	Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.42	1540
66	7S1H\|1\|C	Wild-type Escherichia coli ribosome with antibiotic linezolid	ELECTRON MICROSCOPY	2.35	1540
67	7S1G\|1\|C	wild-type Escherichia coli stalled ribosome with antibiotic linezolid	ELECTRON MICROSCOPY	2.48	1540
68	7S1I\|1\|C	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.48	1540
69	5NWY\|1\|0	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	1539
70	5MDV\|1\|2	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	1534
71	6ORE\|1\|2	Release complex 70S	ELECTRON MICROSCOPY	2.9	1534
72	7OIF\|1\|2	CspA-27 cotranslational folding intermediate 2	ELECTRON MICROSCOPY	3	1534
73	7OT5\|1\|2	CspA-70 cotranslational folding intermediate 1	ELECTRON MICROSCOPY	2.9	1534
74	7OII\|1\|2	CspA-70 cotranslational folding intermediate 2	ELECTRON MICROSCOPY	3	1534
75	7NWT\|1\|2	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	ELECTRON MICROSCOPY	2.66	1534
76	8B0X\|1\|A	Translating 70S ribosome in the unrotated state (P and E, tRNAs)	ELECTRON MICROSCOPY	1.55	1500
77	7N31\|1\|16	Elongating 70S ribosome complex in a post-translocation (POST) conformation	ELECTRON MICROSCOPY	2.69	1533
78	7NSO\|1\|a	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	ELECTRON MICROSCOPY	2.9	1540
79	7ST2\|1\|3	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	ELECTRON MICROSCOPY	2.9	1539
80	6WD0\|1\|3	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	1539
81	7TOS\|1\|16S	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20	ELECTRON MICROSCOPY	2.9	1532
82	6Y69\|1\|a	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	1539
83	6H4N\|1\|a	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	1534
84	7ST6\|1\|3	Pre translocation, non-rotated 70S ribosome (Structure I)	ELECTRON MICROSCOPY	3	1539
85	7Q4K\|1\|AA	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain	ELECTRON MICROSCOPY	3	1534
86	7O19\|1\|AA	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.9	1534
87	7O1A\|1\|AA	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.4	1534
88	6TC3\|1\|16S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	ELECTRON MICROSCOPY	2.7	1534
89	6TBV\|1\|16S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	ELECTRON MICROSCOPY	2.7	1534
90	7O1C\|1\|AA	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.6	1534
91	8EKC\|1\|a	Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA	ELECTRON MICROSCOPY	2.7	1528
92	7P3K\|1\|A	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)	ELECTRON MICROSCOPY	2.9	1519
93	7OIZ\|1\|A	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	ELECTRON MICROSCOPY	2.9	1519
94	6XZA\|1\|A1	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.66	1523
95	6XZB\|1\|A1	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.54	1523
96	8G6W\|1\|A	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.02	1519
97	8EMM\|1\|A	Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates	ELECTRON MICROSCOPY	2.1	1519
98	7K00\|1\|A	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	ELECTRON MICROSCOPY	1.98	1519
99	8EIU\|1\|A	E. coli 70S ribosome with A-loop mutations U2554C and U2555C	ELECTRON MICROSCOPY	2.24	1519
100	6ZTP\|1\|AA	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	1533
101	6ZU1\|1\|AA	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	1533
102	6ZTO\|1\|AA	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	1533
103	8AM9\|1\|B	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome	ELECTRON MICROSCOPY	2.8	1519
104	7N1P\|1\|16	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	ELECTRON MICROSCOPY	2.33	1542
105	6WDE\|1\|3	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	1539
106	5AFI\|1\|a	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	1539
107	5WDT\|1\|a	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	1540
108	5WFS\|1\|a	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	1540
109	7B5K\|1\|a	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	ELECTRON MICROSCOPY	2.9	1533
110	7ZTA\|1\|16S1	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide	ELECTRON MICROSCOPY	2.7	1534
111	4WOI\|1\|AA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1538
112	4WOI\|1\|DA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1539
113	8CGJ\|1\|A	Streptomycin bound to the 30S body	ELECTRON MICROSCOPY	1.79	1130
114	8CF1\|1\|A	Tetracycline bound to the 30S head	ELECTRON MICROSCOPY	1.82	485
115	8CGI\|1\|A	Pentacycline TP038 bound to the 30S head	ELECTRON MICROSCOPY	1.89	460
116	8CAZ\|1\|A	empty 30S head	ELECTRON MICROSCOPY	2.11	460
117	7AFA\|1\|1	Bacterial 30S ribosomal subunit assembly complex state F (head domain)	ELECTRON MICROSCOPY	2.95	456
118	7AF5\|1\|1	Bacterial 30S ribosomal subunit assembly complex state I (head domain)	ELECTRON MICROSCOPY	2.96	456
119	7AF8\|1\|1	Bacterial 30S ribosomal subunit assembly complex state E (head domain)	ELECTRON MICROSCOPY	2.75	456
120	7AF3\|1\|1	Bacterial 30S ribosomal subunit assembly complex state M (head domain)	ELECTRON MICROSCOPY	2.82	456

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_56726.103 Obsolete

Release history

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