NR_3.0_56726.154

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	8B0X\|1\|A (rep)	Small subunit ribosomal RNA	16S rRNA	Escherichia coli B	Bacteria	RF00177	Translating 70S ribosome in the unrotated state (P and E, tRNAs)	Electron microscopy	1.55	1500	2022-11-30
2	9Q87\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli B	Bacteria	RF00177	Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+	Electron microscopy	1.55	1533	2025-05-14
3	9GHE\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)	Electron microscopy	1.87	1514	2025-03-26
4	8FTO\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome with an improved MS2 tag inserted in H98	Electron microscopy	1.85	1519	2023-08-02
5	8BIM\|1\|2	Small subunit ribosomal RNA	16S rRNA RRSB-RRNA	Escherichia coli K-12	Bacteria	RF00177	Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site	Electron microscopy	2.04	1534	2023-08-16
6	8BIL\|1\|2	Small subunit ribosomal RNA	16S rRNA RRSB-RRNA	Escherichia coli K-12	Bacteria	RF00177	Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.	Electron microscopy	2.04	1534	2023-08-16
7	8CGU\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Gentamicin bound to the 30S body	Electron microscopy	1.89	1047	2023-07-26
8	8BGE\|1\|2	Small subunit ribosomal RNA	16S rRNA RRSB-RRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.11	1534	2023-08-16
9	8CEP\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Round2 30S head (no antibiotic)	Electron microscopy	2.04	1046	2023-07-19
10	9GHD\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)	Electron microscopy	2.41	1514	2025-03-26
11	8CGJ\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Streptomycin bound to the 30S body	Electron microscopy	1.79	1130	2023-07-26
12	7K00\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	Electron microscopy	1.98	1519	2020-09-23
13	9N2B\|1\|16	Small subunit ribosomal RNA	16S ribosomal RNA (rRNA) from the rrnB operon	Escherichia coli K-12	Bacteria	RF00177	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)	Electron microscopy	2.2	1542	2025-03-19
14	9GHF\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)	Electron microscopy	2.4	1514	2025-03-26
15	9GHB\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)	Electron microscopy	2.21	1514	2025-03-26
16	8CGR\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Apramycin bound to the 30S body	Electron microscopy	2.12	1060	2023-07-26
17	8BHL\|1\|2	Small subunit ribosomal RNA	16S rRNA RRSB-RRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.21	1534	2023-08-16
18	8EIU\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome with A-loop mutations U2554C and U2555C	Electron microscopy	2.24	1519	2023-02-01
19	8BHP\|1\|2	Small subunit ribosomal RNA	16S rRNA RRSB-RRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.37	1534	2023-08-16
20	9N2C\|1\|16	Small subunit ribosomal RNA	16S ribosomal RNA (rRNA) from the rrnH operon	Escherichia coli K-12	Bacteria	RF00177	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)	Electron microscopy	2.4	1542	2025-03-19
21	8CAI\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Streptomycin and Hygromycin B bound to the 30S body	Electron microscopy	2.08	1114	2023-07-26
22	7N1P\|1\|16	Small subunit ribosomal RNA	16S rRNA, mRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	Electron microscopy	2.33	1542	2021-07-14
23	9B4Z\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)	Electron microscopy	2.2	1539	2025-08-27
24	8BF7\|1\|2	Small subunit ribosomal RNA	16S rRNA RRSB-RRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.33	1534	2023-08-16
25	8HSP\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state	Electron microscopy	2.32	1519	2024-04-03
26	9GHA\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)	Electron microscopy	2.24	1526	2025-03-26
27	9B51\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)	Electron microscopy	2.4	1539	2025-08-27
28	8EMM\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates	Electron microscopy	2.1	1519	2023-05-31
29	9GUU\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00177	30S mRNA delivery complex (consensus)	Electron microscopy	2.5	1539	2024-11-20
30	7S1I\|1\|C	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid	Electron microscopy	2.48	1540	2022-03-02
31	8HTZ\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state	Electron microscopy	2.4	1519	2024-04-03
32	7N2V\|1\|16	Small subunit ribosomal RNA	16S rRNA, mRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	Electron microscopy	2.54	1534	2021-07-14
33	7S1G\|1\|C	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	wild-type Escherichia coli stalled ribosome with antibiotic linezolid	Electron microscopy	2.48	1540	2021-11-17
34	9CG5\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S initiation complex (tRNA-fMet M1 + UUG start codon)	Electron microscopy	2.59	1519	2024-09-18
35	9CG6\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S initiation complex (tRNA-fMet M1 + GUG start codon)	Electron microscopy	2.61	1519	2024-09-18
36	9GUT\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00177	30S mRNA delivery complex (bS1 resolved)	Electron microscopy	2.8	1539	2024-11-20
37	9H0L\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome with cognate tRNASer3 bound to A-site AGC codon	Electron microscopy	2.49	1529	2025-05-28
38	9FDA\|1\|B	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of E. coli 30S-IF1-IF3-mRNA-Edeine complex	Electron microscopy	2	1051	2025-03-19
39	9GUV\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00177	30S mRNA delivery complex (closed-head)	Electron microscopy	3	1539	2024-11-20
40	9GXX\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codon	Electron microscopy	2.61	1520	2025-05-28
41	7S1H\|1\|C	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Wild-type Escherichia coli ribosome with antibiotic linezolid	Electron microscopy	2.35	1540	2021-11-17
42	8YUO\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site	Electron microscopy	2.25	1519	2024-11-06
43	7S1K\|1\|C	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid	Electron microscopy	2.42	1540	2022-01-19
44	9AX7\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S initiation complex (tRNA-fMet M1 + CUG start codon)	Electron microscopy	2.63	1519	2024-09-18
45	8ZFG\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Structure of the Bacterial Ribosome with hypoxia-induced rRNA modifications	Electron microscopy	2.68	1512	2025-11-12
46	9H8G\|1\|A	Small subunit ribosomal RNA	16S rRNA fragment (1078-MER)	Escherichia coli	Bacteria	RF00177	Complex 5 30S-GE81112	Electron microscopy	2.09	1078	2025-08-06
47	8G7P\|1\|a	Small subunit ribosomal RNA	16S Ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)	Electron microscopy	2.9	1529	2024-03-06
48	8IFB\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Dibekacin-bound E.coli 70S ribosome in the PURE system	Electron microscopy	2.43	1519	2024-02-14
49	5J7L\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	1534	2016-07-27
50	8YUQ\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA	Electron microscopy	2.41	1519	2024-11-06
51	5MDV\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	1534	2016-12-14
52	8EKC\|1\|a	Small subunit ribosomal RNA	16S Ribosomal RNA	Escherichia coli	Bacteria	RF00177	Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA	Electron microscopy	2.7	1528	2022-12-07
53	8YUP\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA	Electron microscopy	2.39	1519	2024-11-06
54	9R3A\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain	Electron microscopy	2.86	1513	2026-01-28
55	9AX8\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)	Electron microscopy	2.6	1539	2024-09-18
56	8ZTU\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome arrested by PepNL	Electron microscopy	2.9	1507	2025-03-19
57	7ST2\|1\|3	Small subunit ribosomal RNA	16S rRNA, mRNA	Escherichia coli K-12	Bacteria	RF00177	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	Electron microscopy	2.9	1539	2022-02-23
58	8YUS\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA	Electron microscopy	2.43	1519	2024-11-06
59	9WNQ\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of E.coli ribosome in complex with an engineered arrest peptide	Electron microscopy	2.59	1533	2025-10-22
60	8ZTV\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome arrested by PepNL with RF2	Electron microscopy	2.9	1507	2025-03-19
61	8FZH\|1\|a	Small subunit ribosomal RNA	16S Ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)	Electron microscopy	2.9	1528	2024-07-17
62	7N31\|1\|16	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a post-translocation (POST) conformation	Electron microscopy	2.69	1533	2021-07-14
63	8CF1\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Tetracycline bound to the 30S head	Electron microscopy	1.82	485	2023-07-26
64	7N2U\|1\|16	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	Electron microscopy	2.53	1534	2021-07-14
65	9GUP\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00177	30S mRNA delivery complex (open head)	Electron microscopy	2.8	1539	2024-11-20
66	7UG7\|1\|16	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	Electron microscopy	2.58	1514	2022-05-18
67	9GHC\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)	Electron microscopy	2.79	1514	2025-03-26
68	8G7R\|1\|a	Small subunit ribosomal RNA	16S Ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)	Electron microscopy	2.8	1528	2024-03-06
69	9CG7\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S initiation complex (tRNA-fMet M1 + AUG start codon)	Electron microscopy	2.75	1519	2024-09-18
70	4YBB\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	1534	2015-03-18
71	8CGI\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Pentacycline TP038 bound to the 30S head	Electron microscopy	1.89	460	2023-07-26
72	5NWY\|1\|0	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	1539	2017-07-19
73	8SYL\|1\|a	Small subunit ribosomal RNA	16S Ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs	Electron microscopy	2.9	1528	2023-08-09
74	9B50\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)	Electron microscopy	2.7	1539	2025-08-27
75	8HU1\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state	Electron microscopy	2.69	1519	2024-04-03
76	7ZTA\|1\|16S1	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli K-12	Bacteria	RF00177	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide	Electron microscopy	2.7	1534	2023-04-12
77	8ZEJ\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of E.coli ribosome in complex with an engineered arrest peptide	Electron microscopy	2.69	1533	2025-06-18
78	8FZE\|1\|a	Small subunit ribosomal RNA	16S Ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)	Electron microscopy	3	1528	2024-07-17
79	7OTC\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli BL21(DE3)	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B	Electron microscopy	2.9	1533	2022-05-11
80	9FCO\|1\|B	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of E. coli 30S-IF1-IF3-mRNA-Kasugamycin complex	Electron microscopy	2.4	1046	2025-03-19
81	7P3K\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)	Electron microscopy	2.9	1519	2021-10-27
82	8CAZ\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	empty 30S head	Electron microscopy	2.11	460	2023-07-26
83	8CF8\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Eravacycline bound to the 30S head	Electron microscopy	2.2	460	2023-08-02
84	8YUR\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA	Electron microscopy	2.47	1519	2024-11-06
85	5WDT\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	1540	2018-04-25
86	8G6W\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe	Electron microscopy	2.02	1519	2023-04-05
87	7Y7F\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)	Electron microscopy	2.43	1520	2023-10-25
88	8BGH\|1\|2	Small subunit ribosomal RNA	16S rRNA RRSB-RRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation	Electron microscopy	2.88	1534	2023-08-16
89	9IOT\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutant	Electron microscopy	2.7	1534	2025-07-30
90	5WFS\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	1540	2018-05-02
91	9FIB\|1\|B	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of 30S-IF1-IF3-mRNA-GE81112A complex	Electron microscopy	2.3	1045	2025-03-19
92	8CA7\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Omadacycline and spectinomycin bound to the 30S ribosomal subunit head	Electron microscopy	2.06	502	2023-08-02
93	6ORE\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Release complex 70S	Electron microscopy	2.9	1534	2019-06-19
94	7Y7G\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)	Electron microscopy	2.34	1520	2023-10-25
95	7NSO\|1\|a	Small subunit ribosomal RNA	16S rRNA (1540-MER)	Escherichia coli	Bacteria	RF00177	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	Electron microscopy	2.9	1540	2021-07-14
96	5J7L\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	1533	2016-07-27
97	7Y7E\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	Electron microscopy	2.41	1520	2023-10-25
98	9G06\|1\|B	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex	Electron microscopy	2.85	1504	2025-03-19
99	8BH4\|1\|2	Small subunit ribosomal RNA	16S rRNA RRSB-RRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.62	1534	2023-08-16
100	9NL5\|1\|R3	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation	Electron microscopy	3	1531	2025-04-02
101	8FZJ\|1\|a	Small subunit ribosomal RNA	16S Ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)	Electron microscopy	3	1528	2024-07-17
102	7ST6\|1\|3	Small subunit ribosomal RNA	16S rRNA, mRNA	Escherichia coli K-12	Bacteria	RF00177	Pre translocation, non-rotated 70S ribosome (Structure I)	Electron microscopy	3	1539	2022-02-23
103	4WOI\|1\|DA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	1539	2015-08-05
104	4WOI\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	1538	2015-08-05
105	7N2C\|1\|16	Small subunit ribosomal RNA	16S rRNA, Chains: mR	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	Electron microscopy	2.72	1534	2021-07-14
106	6WD0\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	1539	2020-07-01
107	7OIZ\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	Electron microscopy	2.9	1519	2021-09-15
108	5J91\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	1534	2016-07-06
109	7BOD\|1\|A	Small subunit ribosomal RNA	16S rRNA (body domain of 30S subunit)	Escherichia coli K-12	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state M (body domain)	Electron microscopy	2.88	1078	2021-07-07
110	8IFC\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Arbekacin-bound E.coli 70S ribosome in the PURE system	Electron microscopy	2.9	1519	2024-02-14
111	4V9P\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
112	7Y7C\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)	Electron microscopy	2.51	1520	2023-10-25
113	6WDE\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	1539	2020-07-01
114	7NAR\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)	Electron microscopy	3	1534	2021-12-08
115	9WNR\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor	Electron microscopy	2.76	1533	2025-10-22
116	9RTU\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00177	Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)	Electron microscopy	3	1540	2025-10-01
117	4V9O\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
118	8BHN\|1\|2	Small subunit ribosomal RNA	16S rRNA RRSB-RRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.85	1534	2023-08-16
119	4V9P\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
120	8URM\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site	Electron microscopy	3	1540	2025-07-09
121	7N30\|1\|16	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	Electron microscopy	2.66	1526	2021-07-14
122	7Y7H\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)	Electron microscopy	2.51	1520	2023-10-25
123	7Q4K\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain	Electron microscopy	3	1534	2022-11-16
124	4V9P\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
125	7M5D\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)	Electron microscopy	2.8	1534	2022-10-19
126	6H4N\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	1534	2018-09-05
127	4V9O\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
128	4V9P\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
129	7BOF\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state I (body domain)	Electron microscopy	2.92	1070	2021-07-07
130	8BHJ\|1\|2	Small subunit ribosomal RNA	16S rRNA RRSB-RRNA	Escherichia coli K-12	Bacteria	RF00177	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	Electron microscopy	2.81	1534	2023-08-16
131	7BOH\|1\|A	Small subunit ribosomal RNA	RNA (1527-MER)	Escherichia coli K-12	Bacteria	RF00177	Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)	Electron microscopy	2.82	1527	2021-12-08
132	4YBB\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	1533	2015-03-18
133	9PZG\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit	Electron microscopy	2.42	1532	2025-09-24
134	6XZB\|1\|A1	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.54	1523	2020-11-04
135	4V9O\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
136	8EYT\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	30S_delta_ksgA+KsgA complex	Electron microscopy	2.8	1415	2023-09-06
137	7BOI\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)	Electron microscopy	2.98	1078	2021-07-07
138	7Y7D\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	Electron microscopy	2.58	1520	2023-10-25
139	6I7V\|1\|AA	Small subunit ribosomal RNA	16S ribosmal RNA	Escherichia coli	Bacteria	RF00177	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	1533	2018-12-05
140	7AF8\|1\|1	Small subunit ribosomal RNA	16SrRNA (head domain of the 30S ribosome	Escherichia coli	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state E (head domain)	Electron microscopy	2.75	456	2021-07-07
141	7OE0\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	E. coli pre-30S delta rbfA ribosomal subunit class F	Electron microscopy	2.69	1510	2021-07-14
142	8ZFI\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor	Electron microscopy	2.9	1533	2025-06-18
143	4U1U\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	1538	2014-07-30
144	6Y69\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	1539	2020-07-01
145	9DUL\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of mutant 30S subunit with extended helix 26, version 4	Electron microscopy	2.56	1517	2025-02-05
146	7AF3\|1\|1	Small subunit ribosomal RNA	16S rRNA (head)	Escherichia coli	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state M (head domain)	Electron microscopy	2.82	456	2021-07-07
147	5IQR\|1\|2	Small subunit ribosomal RNA	SSU rRNA	Escherichia coli	Bacteria	RF00177	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	1533	2016-05-04
148	7AF5\|1\|1	Small subunit ribosomal RNA	16SrRNA (head domain of the 30S ribosome)	Escherichia coli	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state I (head domain)	Electron microscopy	2.96	456	2021-07-07
149	6XZA\|1\|A1	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.66	1523	2020-11-04
150	5J91\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	1533	2016-07-06
151	8GHU\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Methyltransferase RmtC bound to the 30S ribosomal subunit	Electron microscopy	3	1532	2023-04-12
152	7BOE\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)	Electron microscopy	2.9	1534	2021-12-08
153	8UXB\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon	Electron microscopy	2.9	1539	2025-07-09
154	9MQ4\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.78	1534	2025-02-05
155	7B5K\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	Electron microscopy	2.9	1533	2021-05-26
156	4U27\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	1538	2014-07-30
157	7NAX\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)	Electron microscopy	2.96	1526	2021-12-08
158	7OI0\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	E.coli delta rbfA pre-30S ribosomal subunit class D	Electron microscopy	2.76	963	2021-07-14
159	4V9O\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	1533	2014-07-09
160	6I7V\|1\|BA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	1533	2018-12-05
161	4U26\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	1538	2014-07-30
162	4U1U\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	1539	2014-07-30
163	7AFA\|1\|1	Small subunit ribosomal RNA	16SrRNA (head domain of the 30S ribosome)	Escherichia coli	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state F (head domain)	Electron microscopy	2.95	456	2021-07-07
164	4U24\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	1538	2014-07-30
165	4U27\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	1539	2014-07-30
166	4U25\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	1538	2014-07-30
167	9MOR\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.65	1534	2025-02-05
168	4V9D\|1\|AA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	1538	2014-07-09
169	9DUK\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of mutant 30S subunit with extended helix 26, version 3	Electron microscopy	2.56	1518	2025-02-05
170	4U25\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	1539	2014-07-30
171	4V9D\|1\|BA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	1539	2014-07-09
172	4U20\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	1538	2014-07-30
173	4U26\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	1539	2014-07-30
174	4U1V\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	1538	2014-07-30
175	4U24\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	1539	2014-07-30
176	4U1V\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	1539	2014-07-30
177	4U20\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	1539	2014-07-30
178	8G2U\|1\|v	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms	Electron microscopy	3	1539	2023-12-06
179	5J5B\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	1534	2016-07-27
180	5J5B\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	1533	2016-07-27
181	7TOS\|1\|16S	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20	Electron microscopy	2.9	1532	2022-05-25
182	8AYE\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S ribosome bound to thermorubin and fMet-tRNA	Electron microscopy	1.96	1519	2023-03-01
183	8QOA\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Structure of SecM-stalled Escherichia coli 70S ribosome	Electron microscopy	2	1513	2024-03-20
184	8QBT\|1\|i	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	E. coli ApdP-stalled ribosomal complex	Electron microscopy	2.2	1539	2024-03-20
185	8R6C\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00177	70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.	Electron microscopy	2.2	1519	2024-07-24
186	8AKN\|1\|B	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00177	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome	Electron microscopy	2.3	1519	2023-03-08
187	9FBV\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00177	70S Escherichia coli ribosome with P-site initiatior tRNA.	Electron microscopy	2.4	1519	2024-06-26
188	8R8M\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00177	70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.	Electron microscopy	2.4	1519	2024-07-24
189	7S1J\|1\|C	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Wild-type Escherichia coli ribosome with antibiotic radezolid	Electron microscopy	2.47	1540	2022-03-02
190	7O1A\|1\|AA	Small subunit ribosomal RNA	Ribosomal RNA 16S	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.4	1534	2021-09-01
191	7SA4\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.55	1534	2022-08-03
192	6YSS\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	Electron microscopy	2.6	1540	2020-08-19
193	7NWT\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	Electron microscopy	2.66	1534	2021-12-15
194	6TC3\|1\|16S1	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	Electron microscopy	2.7	1534	2020-01-01
195	6TBV\|1\|16S1	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	Electron microscopy	2.7	1534	2020-01-01
196	8QK7\|1\|2	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	E167K RF2 on E. coli 70S release complex with UAA	Electron microscopy	2.77	1536	2024-09-25
197	8P16\|1\|2	Small subunit ribosomal RNA	16S rRNA, mRNA	Escherichia coli	Bacteria	RF00177	E167K RF2 on E. coli 70S release complex with UGG (Structure I)	Electron microscopy	2.77	1536	2024-05-22
198	8P18\|1\|2	Small subunit ribosomal RNA	16S rRNA, mRNA	Escherichia coli	Bacteria	RF00177	E167K RF2 on E. coli 70S release complex with UGG (Structure III)	Electron microscopy	2.77	1536	2024-05-22
199	8P17\|1\|2	Small subunit ribosomal RNA	16S RNA, mRNA	Escherichia coli	Bacteria	RF00177	E167K RF2 on E. coli 70S release complex with UGG (Structure II)	Electron microscopy	2.78	1536	2024-05-22
200	8ZFF\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli BW25113	Bacteria	RF00177	Structure of the Bacterial Ribosome without hypoxia-induced rRNA modifications	Electron microscopy	2.59	1512	2025-11-12
201	8AM9\|1\|B	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli BW25113	Bacteria	RF00177	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome	Electron microscopy	2.8	1519	2023-03-08
202	5AFI\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	1539	2015-03-11
203	7OT5\|1\|2	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	CspA-70 cotranslational folding intermediate 1	Electron microscopy	2.9	1534	2022-01-19
204	7O1C\|1\|AA	Small subunit ribosomal RNA	Ribosomal RNA 16S	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	Electron microscopy	2.6	1534	2021-09-01
205	7OIF\|1\|2	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	CspA-27 cotranslational folding intermediate 2	Electron microscopy	3	1534	2022-01-19
206	7OII\|1\|2	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	CspA-70 cotranslational folding intermediate 2	Electron microscopy	3	1534	2022-01-19
207	8B7Y\|1\|C	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.	Electron microscopy	3	1519	2023-01-25
208	7O19\|1\|AA	Small subunit ribosomal RNA	Ribosomal RNA 16S	Escherichia coli K-12	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.9	1534	2021-09-01
209	6ZTO\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	1533	2020-09-23
210	6ZTP\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	1533	2020-09-16
211	6ZU1\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	1533	2020-09-16
212	7BOG\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli K-12	Bacteria	RF00177	Bacterial 30S ribosomal subunit assembly complex state E (body domain)	Electron microscopy	2.75	1071	2021-07-07
213	7PJS\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	Electron microscopy	2.35	662	2021-10-20

Release history

Release	4.24
Date	2026-01-28

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	8CA7\|1\|A	Omadacycline and spectinomycin bound to the 30S ribosomal subunit head	ELECTRON MICROSCOPY	2.06	502
2	8CGI\|1\|A	Pentacycline TP038 bound to the 30S head	ELECTRON MICROSCOPY	1.89	460
3	8CAZ\|1\|A	empty 30S head	ELECTRON MICROSCOPY	2.11	460
4	9G06\|1\|B	Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex	ELECTRON MICROSCOPY	2.85	1504
5	9GUV\|1\|A	30S mRNA delivery complex (closed-head)	ELECTRON MICROSCOPY	3	1539
6	7N2V\|1\|16	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	ELECTRON MICROSCOPY	2.54	1534
7	9GUU\|1\|A	30S mRNA delivery complex (consensus)	ELECTRON MICROSCOPY	2.5	1539
8	8FZJ\|1\|a	Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)	ELECTRON MICROSCOPY	3	1528
9	8FZE\|1\|a	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)	ELECTRON MICROSCOPY	3	1528
10	8FZH\|1\|a	Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)	ELECTRON MICROSCOPY	2.9	1528
11	8EKC\|1\|a	Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA	ELECTRON MICROSCOPY	2.7	1528
12	8G7P\|1\|a	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)	ELECTRON MICROSCOPY	2.9	1529
13	8G7R\|1\|a	Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)	ELECTRON MICROSCOPY	2.8	1528
14	8BHJ\|1\|2	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.81	1534
15	8BH4\|1\|2	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.62	1534
16	8BF7\|1\|2	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.33	1534
17	8BHN\|1\|2	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site	ELECTRON MICROSCOPY	2.85	1534
18	8BGH\|1\|2	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.88	1534
19	8BHL\|1\|2	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.21	1534
20	8BGE\|1\|2	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.11	1534
21	8BIL\|1\|2	Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.	ELECTRON MICROSCOPY	2.04	1534
22	8BHP\|1\|2	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation	ELECTRON MICROSCOPY	2.37	1534
23	8BIM\|1\|2	Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site	ELECTRON MICROSCOPY	2.04	1534
24	9R3A\|1\|A	Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain	ELECTRON MICROSCOPY	2.86	1513
25	9WNQ\|1\|A	Structure of E.coli ribosome in complex with an engineered arrest peptide	ELECTRON MICROSCOPY	2.59	1533
26	8ZEJ\|1\|A	Structure of E.coli ribosome in complex with an engineered arrest peptide	ELECTRON MICROSCOPY	2.69	1533
27	9WNR\|1\|A	Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor	ELECTRON MICROSCOPY	2.76	1533
28	8ZFI\|1\|A	Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor	ELECTRON MICROSCOPY	2.9	1533
29	9AX8\|1\|a	70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)	ELECTRON MICROSCOPY	2.6	1539
30	9MOR\|1\|2	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.65	1534
31	8G2U\|1\|v	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms	ELECTRON MICROSCOPY	3	1539
32	9NL5\|1\|R3	E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation	ELECTRON MICROSCOPY	3	1531
33	6Y69\|1\|a	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	1539
34	6H4N\|1\|a	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	1534
35	7TOS\|1\|16S	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20	ELECTRON MICROSCOPY	2.9	1532
36	7ST2\|1\|3	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	ELECTRON MICROSCOPY	2.9	1539
37	6WD0\|1\|3	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	1539
38	7ST6\|1\|3	Pre translocation, non-rotated 70S ribosome (Structure I)	ELECTRON MICROSCOPY	3	1539
39	7O1C\|1\|AA	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.6	1534
40	7O19\|1\|AA	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.9	1534
41	6TBV\|1\|16S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	ELECTRON MICROSCOPY	2.7	1534
42	6TC3\|1\|16S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	ELECTRON MICROSCOPY	2.7	1534
43	7O1A\|1\|AA	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.4	1534
44	7Q4K\|1\|AA	Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain	ELECTRON MICROSCOPY	3	1534
45	8ZTV\|1\|A	70S ribosome arrested by PepNL with RF2	ELECTRON MICROSCOPY	2.9	1507
46	8ZTU\|1\|A	70S ribosome arrested by PepNL	ELECTRON MICROSCOPY	2.9	1507
47	9IOT\|1\|a	Cryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutant	ELECTRON MICROSCOPY	2.7	1534
48	9Q87\|1\|A	Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+	ELECTRON MICROSCOPY	1.55	1533
49	8B0X\|1\|A	Translating 70S ribosome in the unrotated state (P and E, tRNAs)	ELECTRON MICROSCOPY	1.55	1500
50	7S1I\|1\|C	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.48	1540
51	7S1G\|1\|C	wild-type Escherichia coli stalled ribosome with antibiotic linezolid	ELECTRON MICROSCOPY	2.48	1540
52	7S1H\|1\|C	Wild-type Escherichia coli ribosome with antibiotic linezolid	ELECTRON MICROSCOPY	2.35	1540
53	7S1K\|1\|C	Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.42	1540
54	7S1J\|1\|C	Wild-type Escherichia coli ribosome with antibiotic radezolid	ELECTRON MICROSCOPY	2.47	1540
55	7NWT\|1\|2	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	ELECTRON MICROSCOPY	2.66	1534
56	7OII\|1\|2	CspA-70 cotranslational folding intermediate 2	ELECTRON MICROSCOPY	3	1534
57	7OT5\|1\|2	CspA-70 cotranslational folding intermediate 1	ELECTRON MICROSCOPY	2.9	1534
58	7OIF\|1\|2	CspA-27 cotranslational folding intermediate 2	ELECTRON MICROSCOPY	3	1534
59	6ORE\|1\|2	Release complex 70S	ELECTRON MICROSCOPY	2.9	1534
60	5MDV\|1\|2	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	1534
61	5NWY\|1\|0	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	1539
62	8QOA\|1\|A	Structure of SecM-stalled Escherichia coli 70S ribosome	ELECTRON MICROSCOPY	2	1513
63	7NSO\|1\|a	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	ELECTRON MICROSCOPY	2.9	1540
64	9N2B\|1\|16	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)	ELECTRON MICROSCOPY	2.2	1542
65	7N31\|1\|16	Elongating 70S ribosome complex in a post-translocation (POST) conformation	ELECTRON MICROSCOPY	2.69	1533
66	8ZFF\|1\|A	Structure of the Bacterial Ribosome without hypoxia-induced rRNA modifications	ELECTRON MICROSCOPY	2.59	1512
67	8ZFG\|1\|A	Structure of the Bacterial Ribosome with hypoxia-induced rRNA modifications	ELECTRON MICROSCOPY	2.68	1512
68	9N2C\|1\|16	Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)	ELECTRON MICROSCOPY	2.4	1542
69	9GXX\|1\|A	70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codon	ELECTRON MICROSCOPY	2.61	1520
70	9GHB\|1\|A	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)	ELECTRON MICROSCOPY	2.21	1514
71	9GHC\|1\|A	Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)	ELECTRON MICROSCOPY	2.79	1514
72	9GHE\|1\|A	Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)	ELECTRON MICROSCOPY	1.87	1514
73	9GHF\|1\|A	Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)	ELECTRON MICROSCOPY	2.4	1514
74	9GHD\|1\|A	Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)	ELECTRON MICROSCOPY	2.41	1514
75	8QK7\|1\|2	E167K RF2 on E. coli 70S release complex with UAA	ELECTRON MICROSCOPY	2.77	1536
76	8P18\|1\|2	E167K RF2 on E. coli 70S release complex with UGG (Structure III)	ELECTRON MICROSCOPY	2.77	1536
77	8P17\|1\|2	E167K RF2 on E. coli 70S release complex with UGG (Structure II)	ELECTRON MICROSCOPY	2.78	1536
78	8P16\|1\|2	E167K RF2 on E. coli 70S release complex with UGG (Structure I)	ELECTRON MICROSCOPY	2.77	1536
79	8AKN\|1\|B	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome	ELECTRON MICROSCOPY	2.3	1519
80	8FTO\|1\|A	E. coli 70S ribosome with an improved MS2 tag inserted in H98	ELECTRON MICROSCOPY	1.85	1519
81	9CG7\|1\|A	70S initiation complex (tRNA-fMet M1 + AUG start codon)	ELECTRON MICROSCOPY	2.75	1519
82	9CG5\|1\|A	70S initiation complex (tRNA-fMet M1 + UUG start codon)	ELECTRON MICROSCOPY	2.59	1519
83	9AX7\|1\|A	70S initiation complex (tRNA-fMet M1 + CUG start codon)	ELECTRON MICROSCOPY	2.63	1519
84	9CG6\|1\|A	70S initiation complex (tRNA-fMet M1 + GUG start codon)	ELECTRON MICROSCOPY	2.61	1519
85	8AYE\|1\|A	E. coli 70S ribosome bound to thermorubin and fMet-tRNA	ELECTRON MICROSCOPY	1.96	1519
86	9FBV\|1\|A	70S Escherichia coli ribosome with P-site initiatior tRNA.	ELECTRON MICROSCOPY	2.4	1519
87	8B7Y\|1\|C	Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.	ELECTRON MICROSCOPY	3	1519
88	8CEP\|1\|A	Round2 30S head (no antibiotic)	ELECTRON MICROSCOPY	2.04	1046
89	8CGR\|1\|A	Apramycin bound to the 30S body	ELECTRON MICROSCOPY	2.12	1060
90	8CGU\|1\|A	Gentamicin bound to the 30S body	ELECTRON MICROSCOPY	1.89	1047
91	8URM\|1\|2	E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site	ELECTRON MICROSCOPY	3	1540
92	7M5D\|1\|2	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)	ELECTRON MICROSCOPY	2.8	1534
93	9MQ4\|1\|2	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.78	1534
94	7SA4\|1\|2	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.55	1534
95	6YSS\|1\|a	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	ELECTRON MICROSCOPY	2.6	1540
96	5IQR\|1\|2	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	1533
97	4V9D\|1\|BA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1539
98	4WOI\|1\|DA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1539
99	4WOI\|1\|AA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1538
100	8QBT\|1\|i	E. coli ApdP-stalled ribosomal complex	ELECTRON MICROSCOPY	2.2	1539
101	5WFS\|1\|a	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	1540
102	5WDT\|1\|a	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	1540
103	5AFI\|1\|a	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	1539
104	6WDE\|1\|3	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	1539
105	8SYL\|1\|a	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs	ELECTRON MICROSCOPY	2.9	1528
106	7N1P\|1\|16	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	ELECTRON MICROSCOPY	2.33	1542
107	8R6C\|1\|A	70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.	ELECTRON MICROSCOPY	2.2	1519
108	8EMM\|1\|A	Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates	ELECTRON MICROSCOPY	2.1	1519
109	7K00\|1\|A	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	ELECTRON MICROSCOPY	1.98	1519
110	8G6W\|1\|A	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe	ELECTRON MICROSCOPY	2.02	1519
111	8EIU\|1\|A	E. coli 70S ribosome with A-loop mutations U2554C and U2555C	ELECTRON MICROSCOPY	2.24	1519
112	8IFB\|1\|A	Dibekacin-bound E.coli 70S ribosome in the PURE system	ELECTRON MICROSCOPY	2.43	1519
113	8IFC\|1\|A	Arbekacin-bound E.coli 70S ribosome in the PURE system	ELECTRON MICROSCOPY	2.9	1519
114	6ZU1\|1\|AA	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	1533
115	6ZTP\|1\|AA	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	1533
116	6ZTO\|1\|AA	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	1533
117	9H0L\|1\|A	70S ribosome with cognate tRNASer3 bound to A-site AGC codon	ELECTRON MICROSCOPY	2.49	1529
118	8YUQ\|1\|A	E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA	ELECTRON MICROSCOPY	2.41	1519
119	8YUS\|1\|A	E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA	ELECTRON MICROSCOPY	2.43	1519
120	8HSP\|1\|A	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state	ELECTRON MICROSCOPY	2.32	1519
121	8YUO\|1\|A	E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site	ELECTRON MICROSCOPY	2.25	1519
122	8HTZ\|1\|A	E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state	ELECTRON MICROSCOPY	2.4	1519
123	8YUP\|1\|A	E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA	ELECTRON MICROSCOPY	2.39	1519
124	8YUR\|1\|A	E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA	ELECTRON MICROSCOPY	2.47	1519
125	8HU1\|1\|A	E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state	ELECTRON MICROSCOPY	2.69	1519
126	7Y7D\|1\|A	Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.58	1520
127	7Y7C\|1\|A	Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.51	1520
128	7Y7F\|1\|A	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)	ELECTRON MICROSCOPY	2.43	1520
129	7Y7E\|1\|A	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.41	1520
130	7Y7G\|1\|A	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)	ELECTRON MICROSCOPY	2.34	1520
131	7Y7H\|1\|A	Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)	ELECTRON MICROSCOPY	2.51	1520
132	7B5K\|1\|a	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	ELECTRON MICROSCOPY	2.9	1533
133	7ZTA\|1\|16S1	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide	ELECTRON MICROSCOPY	2.7	1534
134	9B51\|1\|AA	E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)	ELECTRON MICROSCOPY	2.4	1539
135	9B4Z\|1\|AA	E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)	ELECTRON MICROSCOPY	2.2	1539
136	9B50\|1\|AA	E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)	ELECTRON MICROSCOPY	2.7	1539
137	7P3K\|1\|A	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)	ELECTRON MICROSCOPY	2.9	1519
138	7OIZ\|1\|A	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	ELECTRON MICROSCOPY	2.9	1519
139	9DUL\|1\|A	Structure of mutant 30S subunit with extended helix 26, version 4	ELECTRON MICROSCOPY	2.56	1517
140	9DUK\|1\|A	Structure of mutant 30S subunit with extended helix 26, version 3	ELECTRON MICROSCOPY	2.56	1518
141	6XZA\|1\|A1	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.66	1523
142	6XZB\|1\|A1	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.54	1523
143	8CGJ\|1\|A	Streptomycin bound to the 30S body	ELECTRON MICROSCOPY	1.79	1130
144	8CAI\|1\|A	Streptomycin and Hygromycin B bound to the 30S body	ELECTRON MICROSCOPY	2.08	1114
145	5J7L\|1\|BA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	1533
146	5J91\|1\|BA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1533
147	5J5B\|1\|BA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	1533
148	4YBB\|1\|BA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1533
149	6I7V\|1\|BA	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	1533
150	4U24\|1\|CA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1539
151	4U26\|1\|CA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1539
152	4U25\|1\|CA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1539
153	4U27\|1\|CA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1539
154	4U1V\|1\|CA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1539
155	4U20\|1\|CA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1539
156	4U1U\|1\|CA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1539
157	4V9O\|1\|FA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
158	4V9O\|1\|BA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
159	4V9D\|1\|AA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1538
160	8UXB\|1\|2	E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon	ELECTRON MICROSCOPY	2.9	1539
161	7N2U\|1\|16	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	ELECTRON MICROSCOPY	2.53	1534
162	7N30\|1\|16	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	ELECTRON MICROSCOPY	2.66	1526
163	8R8M\|1\|A	70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.	ELECTRON MICROSCOPY	2.4	1519
164	8CF1\|1\|A	Tetracycline bound to the 30S head	ELECTRON MICROSCOPY	1.82	485
165	8AM9\|1\|B	Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome	ELECTRON MICROSCOPY	2.8	1519
166	8CF8\|1\|A	Eravacycline bound to the 30S head	ELECTRON MICROSCOPY	2.2	460
167	4V9P\|1\|BA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
168	4V9P\|1\|DA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
169	4V9O\|1\|DA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
170	5J7L\|1\|AA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	1534
171	5J5B\|1\|AA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	1534
172	5J91\|1\|AA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1534
173	4YBB\|1\|AA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1534
174	6I7V\|1\|AA	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	1533
175	4U1U\|1\|AA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1538
176	4U20\|1\|AA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1538
177	4U1V\|1\|AA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1538
178	4U27\|1\|AA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1538
179	4U25\|1\|AA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1538
180	4U26\|1\|AA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1538
181	4U24\|1\|AA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1538
182	4V9O\|1\|HA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
183	4V9P\|1\|HA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
184	4V9P\|1\|FA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
185	9H8G\|1\|A	Complex 5 30S-GE81112	ELECTRON MICROSCOPY	2.09	1078
186	7BOI\|1\|A	Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)	ELECTRON MICROSCOPY	2.98	1078
187	9GHA\|1\|A	Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)	ELECTRON MICROSCOPY	2.24	1526
188	7UG7\|1\|16	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	ELECTRON MICROSCOPY	2.58	1514
189	7OTC\|1\|a	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B	ELECTRON MICROSCOPY	2.9	1533
190	7N2C\|1\|16	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	ELECTRON MICROSCOPY	2.72	1534
191	7AF8\|1\|1	Bacterial 30S ribosomal subunit assembly complex state E (head domain)	ELECTRON MICROSCOPY	2.75	456
192	7BOH\|1\|A	Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)	ELECTRON MICROSCOPY	2.82	1527
193	7AF3\|1\|1	Bacterial 30S ribosomal subunit assembly complex state M (head domain)	ELECTRON MICROSCOPY	2.82	456
194	7BOE\|1\|A	Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)	ELECTRON MICROSCOPY	2.9	1534
195	7NAR\|1\|A	Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)	ELECTRON MICROSCOPY	3	1534
196	7AFA\|1\|1	Bacterial 30S ribosomal subunit assembly complex state F (head domain)	ELECTRON MICROSCOPY	2.95	456
197	7AF5\|1\|1	Bacterial 30S ribosomal subunit assembly complex state I (head domain)	ELECTRON MICROSCOPY	2.96	456
198	8EYT\|1\|A	30S_delta_ksgA+KsgA complex	ELECTRON MICROSCOPY	2.8	1415
199	7OI0\|1\|A	E.coli delta rbfA pre-30S ribosomal subunit class D	ELECTRON MICROSCOPY	2.76	963
200	7OE0\|1\|A	E. coli pre-30S delta rbfA ribosomal subunit class F	ELECTRON MICROSCOPY	2.69	1510
201	9PZG\|1\|A	Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit	ELECTRON MICROSCOPY	2.42	1532
202	9GUP\|1\|A	30S mRNA delivery complex (open head)	ELECTRON MICROSCOPY	2.8	1539
203	9GUT\|1\|A	30S mRNA delivery complex (bS1 resolved)	ELECTRON MICROSCOPY	2.8	1539
204	7BOD\|1\|A	Bacterial 30S ribosomal subunit assembly complex state M (body domain)	ELECTRON MICROSCOPY	2.88	1078
205	7BOG\|1\|A	Bacterial 30S ribosomal subunit assembly complex state E (body domain)	ELECTRON MICROSCOPY	2.75	1071
206	8GHU\|1\|a	Methyltransferase RmtC bound to the 30S ribosomal subunit	ELECTRON MICROSCOPY	3	1532
207	7BOF\|1\|A	Bacterial 30S ribosomal subunit assembly complex state I (body domain)	ELECTRON MICROSCOPY	2.92	1070
208	7NAX\|1\|A	Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)	ELECTRON MICROSCOPY	2.96	1526
209	7PJS\|1\|a	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	ELECTRON MICROSCOPY	2.35	662
210	9RTU\|1\|a	Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)	ELECTRON MICROSCOPY	3	1540
211	9FDA\|1\|B	Structure of E. coli 30S-IF1-IF3-mRNA-Edeine complex	ELECTRON MICROSCOPY	2	1051
212	9FIB\|1\|B	Structure of 30S-IF1-IF3-mRNA-GE81112A complex	ELECTRON MICROSCOPY	2.3	1045
213	9FCO\|1\|B	Structure of E. coli 30S-IF1-IF3-mRNA-Kasugamycin complex	ELECTRON MICROSCOPY	2.4	1046

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_56726.154 Obsolete

Release history

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