NR_3.0_65061.65

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	8GLP\|1\|L5+ 8GLP\|1\|L8 (rep)	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)	Electron microscopy	1.67	3702	2023-04-19
2	9TV2\|1\|L5+ 9TV2\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV	Electron microscopy	2.1	3212	2026-07-01
3	9TT7\|1\|L5+ 9TT7\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	80S ribosome of WT EBV infected human B-cells	Electron microscopy	2.2	3211	2026-07-22
4	9O3W\|1\|L5+ 9O3W\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain	Electron microscopy	1.9	3702	2026-03-04
5	8QYX\|1\|A2+ 8QYX\|1\|C2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 60S ribosomal subunit	Electron microscopy	1.78	3862	2024-12-11
6	8YOO\|1\|L5+ 8YOO\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline	Electron microscopy	2	3826	2024-07-10
7	8QFD\|1\|5+ 8QFD\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	UFL1 E3 ligase bound 60S ribosome	Electron microscopy	2.2	3274	2024-02-21
8	9SPI\|1\|L5+ 9SPI\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE	Electron microscopy	2.4	3562	2026-01-21
9	9C3H\|1\|L5+ 9C3H\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.	Electron microscopy	2	3679	2024-12-04
10	8A3D\|1\|A+ 8A3D\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound	Electron microscopy	1.67	3451	2023-03-08
11	9SPF\|1\|L5+ 9SPF\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE	Electron microscopy	2.4	3622	2026-01-21
12	9O3V\|1\|L5+ 9O3V\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 80S ribosome stalled on MYC nascent chain	Electron microscopy	2.2	3702	2026-03-04
13	9S3D\|1\|L5+ 9S3D\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NAC bound human RNC with 58 amino acid ARF1-linker	Electron microscopy	2.32	3804	2026-02-18
14	9I2D\|1\|L5+ 9I2D\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with 10 amino acid ARF1-linker	Electron microscopy	2.19	3804	2026-02-04
15	9S3B\|1\|L5+ 9S3B\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1	Electron microscopy	2.38	3804	2026-02-18
16	9S3C\|1\|L5+ 9S3C\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2	Electron microscopy	2.42	3804	2026-02-18
17	9QLO\|1\|L5+ 9QLO\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with full length ARF1 - State 1	Electron microscopy	2.47	3804	2026-02-18
18	9PBE\|1\|L5+ 9PBE\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human 80S ribosome (composite map)	Electron microscopy	2.19	3811	2025-12-24
19	8G5Y\|1\|L5+ 8G5Y\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)	Electron microscopy	2.29	3877	2023-04-19
20	9RUC\|1\|L5+ 9RUC\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)	Electron microscopy	2.5	3342	2026-05-13
21	9PKD\|1\|L5+ 9PKD\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ CHX and HHT treated 80S consensus ribosome	Electron microscopy	2.42	3811	2026-07-15
22	9QLQ\|1\|L5+ 9QLQ\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with full length ARF1 - alternative State	Electron microscopy	2.57	3804	2026-02-18
23	8YOP\|1\|L5+ 8YOP\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with 4 um Tigecycline	Electron microscopy	2.2	3927	2024-07-10
24	9O3Y\|1\|L5+ 9O3Y\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain	Electron microscopy	2.2	3702	2026-03-04
25	9P7D\|1\|L5+ 9P7D\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating class4 80S ribosome	Electron microscopy	2.57	3811	2025-12-24
26	8QOI\|1\|L5+ 8QOI\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA (3773-MER), 5.8S rRNA (156-MER)	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA	Electron microscopy	1.9	3929	2024-06-12
27	9P8B\|1\|L5+ 9P8B\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human eEF1A-A/T-P-E state 80S ribosome	Electron microscopy	2.48	3811	2025-12-24
28	8G5Z\|1\|L5+ 8G5Z\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)	Electron microscopy	2.64	3843	2023-04-19
29	8JDK\|1\|D+ 8JDK\|1\|F	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	Electron microscopy	2.26	3668	2023-12-06
30	9P7E\|1\|L5+ 9P7E\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating class5 80S ribosome	Electron microscopy	2.59	3811	2025-12-24
31	8G60\|1\|L5+ 8G60\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)	Electron microscopy	2.54	3793	2023-04-19
32	9RPV\|1\|M5+ 9RPV\|1\|M8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA of the stalled 80S, 5.8S rRNA of the stalled 80S	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the ZAK-bound human disome	Electron microscopy	2.35	3702	2025-12-10
33	9GUL\|1\|L5+ 9GUL\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex	Electron microscopy	2.2	3823	2025-09-24
34	6ZMI\|1\|L5+ 6ZMI\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex	Electron microscopy	2.6	3929	2020-08-19
35	9FQZ\|1\|L5+ 9FQZ\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, LSU rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1	Electron microscopy	2.85	3630	2026-01-14
36	8XSX\|1\|L5+ 8XSX\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2	Electron microscopy	2.4	3927	2024-07-10
37	9QLP\|1\|L5+ 9QLP\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, RNA (156-MER)	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with full length ARF1 - State 2	Electron microscopy	2.75	3804	2026-02-18
38	8JDL\|1\|D+ 8JDL\|1\|F	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)	Electron microscopy	2.42	3668	2023-12-06
39	9P73\|1\|L5+ 9P73\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human eEF2-A/P-P/E state 80S ribosome	Electron microscopy	2.66	3811	2025-12-24
40	8JDJ\|1\|D+ 8JDJ\|1\|F	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	Electron microscopy	2.5	3668	2023-12-06
41	7F5S\|1\|L5+ 7F5S\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human delta-METTL18 60S ribosome	Electron microscopy	2.72	3871	2022-06-22
42	8OJ5\|1\|5+ 8OJ5\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	Electron microscopy	2.9	3622	2024-02-21
43	8K2C\|1\|L5+ 8K2C\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with Tigecycline	Electron microscopy	2.4	3927	2024-07-10
44	9P7O\|1\|L5+ 9P7O\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human AT-P-Z state ribosome	Electron microscopy	2.65	3811	2025-12-24
45	9RPV\|1\|L5+ 9RPV\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA of the collided 80S, 5.8S rRNA of the collided 80S	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the ZAK-bound human disome	Electron microscopy	2.35	3739	2025-12-10
46	9RUA\|1\|L5+ 9RUA\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)	Electron microscopy	2.9	3606	2026-06-03
47	9P7Y\|1\|L5+ 9P7Y\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human A-P-E state 80S ribosome	Electron microscopy	2.75	3811	2025-12-24
48	7XNY\|1\|L1+ 7XNY\|1\|L3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells	Electron microscopy	2.5	3929	2023-04-05
49	9P7C\|1\|L5+ 9P7C\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating class3 80S ribosome	Electron microscopy	2.78	3811	2025-12-24
50	8FLE\|1\|L3+ 8FLE\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State L2)	Electron microscopy	2.48	3526	2023-07-12
51	9PA7\|1\|L5+ 9PA7\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human 80S consensus ribosome with EBP1	Electron microscopy	2.67	3811	2025-12-24
52	6ZM7\|1\|L5+ 6ZM7\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex	Electron microscopy	2.7	3929	2020-07-29
53	9P9J\|1\|L5+ 9P9J\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human 60S ribosome	Electron microscopy	2.87	3811	2025-12-24
54	9MNC\|1\|L5+ 9MNC\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 80S ribosome bound to small molecule SW393071	Electron microscopy	2.33	3656	2026-06-24
55	9P7A\|1\|L5+ 9P7A\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human hibernating class2 80S ribosome	Electron microscopy	2.81	3811	2025-12-24
56	9VXN\|1\|L5+ 9VXN\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs	Electron microscopy	2.51	3807	2026-07-22
57	9P7X\|1\|L5+ 9P7X\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human A-P-Z state 80S ribosome	Electron microscopy	2.83	3811	2025-12-24
58	9P9I\|1\|L5+ 9P9I\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human unrotated hibernating without CCDC124 state 80S ribosome	Electron microscopy	2.77	3811	2025-12-24
59	8JDM\|1\|D+ 8JDM\|1\|F	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)	Electron microscopy	2.67	3668	2023-12-06
60	7OW7\|1\|A+ 7OW7\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	EIF6-bound large subunit of the human ribosome	Electron microscopy	2.2	3451	2022-10-05
61	7XNX\|1\|L1+ 7XNX\|1\|L3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells	Electron microscopy	2.7	3929	2023-04-05
62	6QZP\|1\|L5+ 6QZP\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA (3773-MER), 5.8S rRNA (156-MER)	Homo sapiens	Eukarya	RF02543 + RF00002	High-resolution cryo-EM structure of the human 80S ribosome	Electron microscopy	2.9	3929	2019-04-24
63	8IFD\|1\|1A+ 8IFD\|1\|1C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Dibekacin-added human 80S ribosome	Electron microscopy	2.59	3873	2024-02-14
64	8FLB\|1\|L3+ 8FLB\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State K2)	Electron microscopy	2.55	3574	2023-07-12
65	8FLD\|1\|L3+ 8FLD\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State L1)	Electron microscopy	2.58	3526	2023-07-12
66	8FL7\|1\|L3+ 8FL7\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State J2)	Electron microscopy	2.55	3563	2023-07-12
67	9P72\|1\|L5+ 9P72\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human P-E state 80S ribosome	Electron microscopy	2.8	3811	2025-12-24
68	9P7K\|1\|L5+ 9P7K\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human post eEF1A-A/T-P-E state 80S ribosome	Electron microscopy	2.8	3811	2025-12-24
69	9P76\|1\|L5+ 9P76\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human eEF1A-A/T-P state 80S ribosome	Electron microscopy	2.83	3811	2025-12-24
70	9P9H\|1\|L5+ 9P9H\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human unrotated hibernating with CCDC124 state 80S ribosome	Electron microscopy	2.84	3811	2025-12-24
71	9P78\|1\|L5+ 9P78\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome	Electron microscopy	2.9	3811	2025-12-24
72	6Y2L\|1\|L5+ 6Y2L\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of human ribosome in POST state	Electron microscopy	3	3769	2020-04-15
73	8G61\|1\|L5+ 8G61\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)	Electron microscopy	2.94	3813	2023-04-19
74	9P7N\|1\|L5+ 9P7N\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Post-eEF1A-A/T-P-Z state 80S ribosome	Electron microscopy	2.83	3811	2025-12-24
75	8IFE\|1\|1A+ 8IFE\|1\|1C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Arbekacin-added human 80S ribosome	Electron microscopy	2.57	3873	2024-02-14
76	9RU9\|1\|L5+ 9RU9\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	23S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)	Electron microscopy	2.97	3679	2026-06-03
77	6Y6X\|1\|L5+ 6Y6X\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Tetracenomycin X bound to the human ribosome	Electron microscopy	2.8	3929	2020-07-08
78	9GMO\|1\|A+ 9GMO\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16	Electron microscopy	2.59	3542	2024-10-02
79	9P7W\|1\|L5+ 9P7W\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human A-P state 80S ribosome	Electron microscopy	2.93	3811	2025-12-24
80	6ZME\|1\|L5+ 6ZME\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex	Electron microscopy	3	3929	2020-08-12
81	9P6Z\|1\|L5+ 9P6Z\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human P-Z state 80S ribosome	Electron microscopy	2.97	3811	2025-12-24
82	9I2E\|1\|L5+ 9I2E\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human ribosome (combined translational states)	Electron microscopy	2.95	3928	2026-02-04
83	7QVP\|1\|L5+ 7QVP\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human collided disome (di-ribosome) stalled on XBP1 mRNA	Electron microscopy	3	3767	2022-10-12
84	9RU8\|1\|L5+ 9RU8\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)	Electron microscopy	3	3599	2026-06-03
85	8FL2\|1\|L3+ 8FL2\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State I1)	Electron microscopy	2.67	3649	2023-07-12
86	9P7L\|1\|L5+ 9P7L\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Post-eEF1A-AT-P state 80S ribosome	Electron microscopy	2.92	3811	2025-12-24
87	8FLA\|1\|L3+ 8FLA\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State K1)	Electron microscopy	2.63	3574	2023-07-12
88	9RU7\|1\|L5+ 9RU7\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)	Electron microscopy	3	3527	2026-05-13
89	22TU\|1\|L5+ 22TU\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 80S ribosome in complex with DHX29	Electron microscopy	3	3775	2026-04-01
90	8FL6\|1\|L3+ 8FL6\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State J1)	Electron microscopy	2.62	3559	2023-07-12
91	9KZU\|1\|L5+ 9KZU\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S_ribosomal_RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3	Electron microscopy	3	3819	2025-12-03
92	8FL3\|1\|L3+ 8FL3\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State I2)	Electron microscopy	2.53	3648	2023-07-12
93	9B0P\|1\|L5+ 9B0P\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA [Homo sapiens], 5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating class1 80S ribosome	Electron microscopy	2.82	3896	2025-03-19
94	9GY4\|1\|5+ 9GY4\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)	Electron microscopy	3	3676	2025-05-14
95	8IDT\|1\|2+ 8IDT\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State G	Electron microscopy	2.8	3680	2023-08-09
96	9WW4\|1\|AA+ 9WW4\|1\|AC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA (3773-MER), 5.8S rRNA (156-MER)	Homo sapiens	Eukarya	RF02543 + RF00002	human 80S ribosome non-rotated state	Electron microscopy	2.48	3929	2026-09-16
97	9P9K\|1\|L5+ 9P9K\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human 60S ribosome with EIF6	Electron microscopy	2.96	3811	2025-12-24
98	8G6J\|1\|L5+ 8G6J\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)	Electron microscopy	2.8	3843	2023-04-19
99	9P8H\|1\|L5+ 9P8H\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human A/P-P/E state 80S ribosome	Electron microscopy	2.98	3811	2025-12-24
100	8INF\|1\|2+ 8INF\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State F'	Electron microscopy	3	3808	2023-08-09
101	8FLF\|1\|L3+ 8FLF\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State L3)	Electron microscopy	2.65	3479	2023-07-12
102	7QVP\|1\|L6+ 7QVP\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human collided disome (di-ribosome) stalled on XBP1 mRNA	Electron microscopy	3	3728	2022-10-12
103	8XSY\|1\|L5+ 8XSY\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)	Electron microscopy	3	3927	2024-07-10
104	28LN\|1\|B5+ 28LN\|1\|B8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	XBP1u-stalled RPL4 RNC in complex with NAC	Electron microscopy	2.7	3794	2026-06-10
105	6XA1\|1\|L5+ 6XA1\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of a drug-like compound stalled human translation termination complex	Electron microscopy	2.8	3665	2020-10-07
106	8FKV\|1\|L3+ 8FKV\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State D1)	Electron microscopy	2.47	2365	2023-07-12
107	8FL9\|1\|L3+ 8FL9\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State J3)	Electron microscopy	2.75	3515	2023-07-12
108	8RL2\|1\|L5+ 8RL2\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human pre-60S - State 5	Electron microscopy	2.84	3538	2025-01-15
109	8FKW\|1\|L3+ 8FKW\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State D2)	Electron microscopy	2.5	2429	2023-07-12
110	8IDY\|1\|2+ 8IDY\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State F	Electron microscopy	3	3797	2023-08-09
111	8FLC\|1\|L3+ 8FLC\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State K3)	Electron microscopy	2.76	3527	2023-07-12
112	9M0P\|1\|L5+ 9M0P\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA\|HOMO SAPIENS, 5.8S ribosomal RNA\|HOMO SAPIENS	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of human 80S ribosome in complex with montanine	Electron microscopy	2.78	3443	2026-01-14
113	9WW5\|1\|AA+ 9WW5\|1\|AC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA (3773-MER), 5.8S rRNA (156-MER)	Homo sapiens	Eukarya	RF02543 + RF00002	human 80S ribosome rotated state	Electron microscopy	2.69	3929	2026-09-16
114	8FKY\|1\|L3+ 8FKY\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State F)	Electron microscopy	2.67	2740	2023-07-12
115	8FKX\|1\|L3+ 8FKX\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State E)	Electron microscopy	2.59	2402	2023-07-12
116	8FL4\|1\|L3+ 8FL4\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State I3)	Electron microscopy	2.89	3640	2023-07-12
117	8FKQ\|1\|L3+ 8FKQ\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State A2)	Electron microscopy	2.76	1715	2023-07-12
118	8FKU\|1\|L3+ 8FKU\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State C2)	Electron microscopy	2.82	2337	2023-07-12
119	8FKS\|1\|L3+ 8FKS\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State B2)	Electron microscopy	2.88	1976	2023-07-12
120	8FKT\|1\|L3+ 8FKT\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State C1)	Electron microscopy	2.81	2277	2023-07-12
121	9WW6\|1\|AA+ 9WW6\|1\|AC		28S rRNA (3773-MER), 5.8S rRNA (156-MER)	Homo sapiens			human 80S ribosome delta eL41 non-rotated state	Electron microscopy	2.83	3926	2026-09-23
122	8FKR\|1\|L3+ 8FKR\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State B1)	Electron microscopy	2.89	1921	2023-07-12
123	8ONY\|1\|5	Large subunit ribosomal RNA	28S rRNA	Homo sapiens	Eukarya	RF02543	Human Methionine Aminopeptidase 2 at the 80S ribosome	Electron microscopy	2.92	156	2024-02-21
124	8FKP\|1\|L3+ 8FKP\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State A1)	Electron microscopy	2.85	1659	2023-07-12
125	8FL0\|1\|L3	Large subunit ribosomal RNA	28S rRNA	Homo sapiens	Eukarya	RF02543	Human nucleolar pre-60S ribosomal subunit (State H)	Electron microscopy	2.91	1558	2023-07-12
126	6Z6N\|1\|L5+ 6Z6N\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)	Electron microscopy	2.9	3928	2020-07-29
127	6Z6L\|1\|L5+ 6Z6L\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of human CCDC124 bound to 80S ribosomes	Electron microscopy	3	3928	2020-07-29
128	9RG7\|1\|L5+ 9RG7\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In vitro reconstituted NAA40-NAC bound 80S	Electron microscopy	2.72	3825	2026-06-17

Release history

Release	4.58
Date	2026-09-23

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	9TT7\|1\|L5+ 9TT7\|1\|L8	80S ribosome of WT EBV infected human B-cells	ELECTRON MICROSCOPY	2.2	3211
2	9TV2\|1\|L5+ 9TV2\|1\|L8	80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV	ELECTRON MICROSCOPY	2.1	3212
3	28LN\|1\|B5+ 28LN\|1\|B8	XBP1u-stalled RPL4 RNC in complex with NAC	ELECTRON MICROSCOPY	2.7	3794
4	8QYX\|1\|A2+ 8QYX\|1\|C2	Human 60S ribosomal subunit	ELECTRON MICROSCOPY	1.78	3862
5	7QVP\|1\|L6+ 7QVP\|1\|L1	Human collided disome (di-ribosome) stalled on XBP1 mRNA	ELECTRON MICROSCOPY	3	3728
6	9RPV\|1\|L5+ 9RPV\|1\|L8	Structure of the ZAK-bound human disome	ELECTRON MICROSCOPY	2.35	3739
7	9VXN\|1\|L5+ 9VXN\|1\|L8	Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs	ELECTRON MICROSCOPY	2.51	3807
8	9WW6\|1\|AA+ 9WW6\|1\|AC	human 80S ribosome delta eL41 non-rotated state	ELECTRON MICROSCOPY	2.83	3926
9	9WW5\|1\|AA+ 9WW5\|1\|AC	human 80S ribosome rotated state	ELECTRON MICROSCOPY	2.69	3929
10	9WW4\|1\|AA+ 9WW4\|1\|AC	human 80S ribosome non-rotated state	ELECTRON MICROSCOPY	2.48	3929
11	8QOI\|1\|L5+ 8QOI\|1\|L8	Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA	ELECTRON MICROSCOPY	1.9	3929
12	7F5S\|1\|L5+ 7F5S\|1\|L8	human delta-METTL18 60S ribosome	ELECTRON MICROSCOPY	2.72	3871
13	6QZP\|1\|L5+ 6QZP\|1\|L8	High-resolution cryo-EM structure of the human 80S ribosome	ELECTRON MICROSCOPY	2.9	3929
14	6Y6X\|1\|L5+ 6Y6X\|1\|L8	Tetracenomycin X bound to the human ribosome	ELECTRON MICROSCOPY	2.8	3929
15	6Z6N\|1\|L5+ 6Z6N\|1\|L8	Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)	ELECTRON MICROSCOPY	2.9	3928
16	6Z6L\|1\|L5+ 6Z6L\|1\|L8	Cryo-EM structure of human CCDC124 bound to 80S ribosomes	ELECTRON MICROSCOPY	3	3928
17	6ZM7\|1\|L5+ 6ZM7\|1\|L8	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex	ELECTRON MICROSCOPY	2.7	3929
18	6ZMI\|1\|L5+ 6ZMI\|1\|L8	SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex	ELECTRON MICROSCOPY	2.6	3929
19	6ZME\|1\|L5+ 6ZME\|1\|L8	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex	ELECTRON MICROSCOPY	3	3929
20	7XNX\|1\|L1+ 7XNX\|1\|L3	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells	ELECTRON MICROSCOPY	2.7	3929
21	7XNY\|1\|L1+ 7XNY\|1\|L3	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells	ELECTRON MICROSCOPY	2.5	3929
22	8YOP\|1\|L5+ 8YOP\|1\|L8	Cryo-EM structure of the human 80S ribosome with 4 um Tigecycline	ELECTRON MICROSCOPY	2.2	3927
23	8K2C\|1\|L5+ 8K2C\|1\|L8	Cryo-EM structure of the human 80S ribosome with Tigecycline	ELECTRON MICROSCOPY	2.4	3927
24	8XSY\|1\|L5+ 8XSY\|1\|L8	Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)	ELECTRON MICROSCOPY	3	3927
25	9RG7\|1\|L5+ 9RG7\|1\|L8	In vitro reconstituted NAA40-NAC bound 80S	ELECTRON MICROSCOPY	2.72	3825
26	8YOO\|1\|L5+ 8YOO\|1\|L8	Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline	ELECTRON MICROSCOPY	2	3826
27	9MNC\|1\|L5+ 9MNC\|1\|L1	Human 80S ribosome bound to small molecule SW393071	ELECTRON MICROSCOPY	2.33	3656
28	9C3H\|1\|L5+ 9C3H\|1\|L1	Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.	ELECTRON MICROSCOPY	2	3679
29	8XSX\|1\|L5+ 8XSX\|1\|L8	Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2	ELECTRON MICROSCOPY	2.4	3927
30	9FQZ\|1\|L5+ 9FQZ\|1\|L8	CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1	ELECTRON MICROSCOPY	2.85	3630
31	9B0P\|1\|L5+ 9B0P\|1\|L8	In situ human Hibernating class1 80S ribosome	ELECTRON MICROSCOPY	2.82	3896
32	9I2E\|1\|L5+ 9I2E\|1\|L8	NMT1-NAC bound human ribosome (combined translational states)	ELECTRON MICROSCOPY	2.95	3928
33	9P73\|1\|L5+ 9P73\|1\|L8	In situ human eEF2-A/P-P/E state 80S ribosome	ELECTRON MICROSCOPY	2.66	3811
34	9P8H\|1\|L5+ 9P8H\|1\|L8	In situ human A/P-P/E state 80S ribosome	ELECTRON MICROSCOPY	2.98	3811
35	9P78\|1\|L5+ 9P78\|1\|L8	In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome	ELECTRON MICROSCOPY	2.9	3811
36	9P7A\|1\|L5+ 9P7A\|1\|L8	In situ human hibernating class2 80S ribosome	ELECTRON MICROSCOPY	2.81	3811
37	9P7C\|1\|L5+ 9P7C\|1\|L8	In situ human Hibernating class3 80S ribosome	ELECTRON MICROSCOPY	2.78	3811
38	9P7D\|1\|L5+ 9P7D\|1\|L8	In situ human Hibernating class4 80S ribosome	ELECTRON MICROSCOPY	2.57	3811
39	9P7E\|1\|L5+ 9P7E\|1\|L8	In situ human Hibernating class5 80S ribosome	ELECTRON MICROSCOPY	2.59	3811
40	9P9K\|1\|L5+ 9P9K\|1\|L8	In situ human 60S ribosome with EIF6	ELECTRON MICROSCOPY	2.96	3811
41	9P9J\|1\|L5+ 9P9J\|1\|L8	In situ human 60S ribosome	ELECTRON MICROSCOPY	2.87	3811
42	9PBE\|1\|L5+ 9PBE\|1\|L8	In situ human 80S ribosome (composite map)	ELECTRON MICROSCOPY	2.19	3811
43	9PA7\|1\|L5+ 9PA7\|1\|L8	In situ human 80S consensus ribosome with EBP1	ELECTRON MICROSCOPY	2.67	3811
44	9P9I\|1\|L5+ 9P9I\|1\|L8	In situ human unrotated hibernating without CCDC124 state 80S ribosome	ELECTRON MICROSCOPY	2.77	3811
45	9P9H\|1\|L5+ 9P9H\|1\|L8	In situ human unrotated hibernating with CCDC124 state 80S ribosome	ELECTRON MICROSCOPY	2.84	3811
46	9P8B\|1\|L5+ 9P8B\|1\|L8	In situ human eEF1A-A/T-P-E state 80S ribosome	ELECTRON MICROSCOPY	2.48	3811
47	9P7K\|1\|L5+ 9P7K\|1\|L8	In situ human post eEF1A-A/T-P-E state 80S ribosome	ELECTRON MICROSCOPY	2.8	3811
48	9P76\|1\|L5+ 9P76\|1\|L8	In situ human eEF1A-A/T-P state 80S ribosome	ELECTRON MICROSCOPY	2.83	3811
49	9P72\|1\|L5+ 9P72\|1\|L8	In situ human P-E state 80S ribosome	ELECTRON MICROSCOPY	2.8	3811
50	9P7L\|1\|L5+ 9P7L\|1\|L8	In situ human Post-eEF1A-AT-P state 80S ribosome	ELECTRON MICROSCOPY	2.92	3811
51	9P7Y\|1\|L5+ 9P7Y\|1\|L8	In situ human A-P-E state 80S ribosome	ELECTRON MICROSCOPY	2.75	3811
52	9P7W\|1\|L5+ 9P7W\|1\|L8	In situ human A-P state 80S ribosome	ELECTRON MICROSCOPY	2.93	3811
53	9P6Z\|1\|L5+ 9P6Z\|1\|L8	In situ human P-Z state 80S ribosome	ELECTRON MICROSCOPY	2.97	3811
54	9P7N\|1\|L5+ 9P7N\|1\|L8	In situ human Post-eEF1A-A/T-P-Z state 80S ribosome	ELECTRON MICROSCOPY	2.83	3811
55	9P7O\|1\|L5+ 9P7O\|1\|L8	In situ human AT-P-Z state ribosome	ELECTRON MICROSCOPY	2.65	3811
56	9PKD\|1\|L5+ 9PKD\|1\|L8	In situ CHX and HHT treated 80S consensus ribosome	ELECTRON MICROSCOPY	2.42	3811
57	9P7X\|1\|L5+ 9P7X\|1\|L8	In situ human A-P-Z state 80S ribosome	ELECTRON MICROSCOPY	2.83	3811
58	9S3D\|1\|L5+ 9S3D\|1\|L8	NAC bound human RNC with 58 amino acid ARF1-linker	ELECTRON MICROSCOPY	2.32	3804
59	9S3C\|1\|L5+ 9S3C\|1\|L8	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2	ELECTRON MICROSCOPY	2.42	3804
60	9S3B\|1\|L5+ 9S3B\|1\|L8	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1	ELECTRON MICROSCOPY	2.38	3804
61	9I2D\|1\|L5+ 9I2D\|1\|L8	NMT1-NAC bound human RNC with 10 amino acid ARF1-linker	ELECTRON MICROSCOPY	2.19	3804
62	9QLO\|1\|L5+ 9QLO\|1\|L8	NMT1-NAC bound human RNC with full length ARF1 - State 1	ELECTRON MICROSCOPY	2.47	3804
63	9QLP\|1\|L5+ 9QLP\|1\|L8	NMT1-NAC bound human RNC with full length ARF1 - State 2	ELECTRON MICROSCOPY	2.75	3804
64	9QLQ\|1\|L5+ 9QLQ\|1\|L8	NMT1-NAC bound human RNC with full length ARF1 - alternative State	ELECTRON MICROSCOPY	2.57	3804
65	6Y2L\|1\|L5+ 6Y2L\|1\|L8	Structure of human ribosome in POST state	ELECTRON MICROSCOPY	3	3769
66	7QVP\|1\|L5+ 7QVP\|1\|L8	Human collided disome (di-ribosome) stalled on XBP1 mRNA	ELECTRON MICROSCOPY	3	3767
67	22TU\|1\|L5+ 22TU\|1\|L8	Human 80S ribosome in complex with DHX29	ELECTRON MICROSCOPY	3	3775
68	6XA1\|1\|L5+ 6XA1\|1\|L8	Structure of a drug-like compound stalled human translation termination complex	ELECTRON MICROSCOPY	2.8	3665
69	9RUC\|1\|L5+ 9RUC\|1\|L8	WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)	ELECTRON MICROSCOPY	2.5	3342
70	8G5Z\|1\|L5+ 8G5Z\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)	ELECTRON MICROSCOPY	2.64	3843
71	8G6J\|1\|L5+ 8G6J\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)	ELECTRON MICROSCOPY	2.8	3843
72	8G61\|1\|L5+ 8G61\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)	ELECTRON MICROSCOPY	2.94	3813
73	9RPV\|1\|M5+ 9RPV\|1\|M8	Structure of the ZAK-bound human disome	ELECTRON MICROSCOPY	2.35	3702
74	9SPI\|1\|L5+ 9SPI\|1\|L8	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE	ELECTRON MICROSCOPY	2.4	3562
75	9SPF\|1\|L5+ 9SPF\|1\|L8	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE	ELECTRON MICROSCOPY	2.4	3622
76	9O3V\|1\|L5+ 9O3V\|1\|L8	Human 80S ribosome stalled on MYC nascent chain	ELECTRON MICROSCOPY	2.2	3702
77	9O3Y\|1\|L5+ 9O3Y\|1\|L8	Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain	ELECTRON MICROSCOPY	2.2	3702
78	9O3W\|1\|L5+ 9O3W\|1\|L8	Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain	ELECTRON MICROSCOPY	1.9	3702
79	9RU9\|1\|L5+ 9RU9\|1\|L8	RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)	ELECTRON MICROSCOPY	2.97	3679
80	8G5Y\|1\|L5+ 8G5Y\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)	ELECTRON MICROSCOPY	2.29	3877
81	8GLP\|1\|L5+ 8GLP\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)	ELECTRON MICROSCOPY	1.67	3702
82	8G60\|1\|L5+ 8G60\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)	ELECTRON MICROSCOPY	2.54	3793
83	9GMO\|1\|A+ 9GMO\|1\|C	eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16	ELECTRON MICROSCOPY	2.59	3542
84	8A3D\|1\|A+ 8A3D\|1\|C	Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound	ELECTRON MICROSCOPY	1.67	3451
85	7OW7\|1\|A+ 7OW7\|1\|C	EIF6-bound large subunit of the human ribosome	ELECTRON MICROSCOPY	2.2	3451
86	9GY4\|1\|5+ 9GY4\|1\|8	60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)	ELECTRON MICROSCOPY	3	3676
87	8OJ5\|1\|5+ 8OJ5\|1\|8	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	ELECTRON MICROSCOPY	2.9	3622
88	9RUA\|1\|L5+ 9RUA\|1\|L8	RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)	ELECTRON MICROSCOPY	2.9	3606
89	9RU8\|1\|L5+ 9RU8\|1\|L8	WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)	ELECTRON MICROSCOPY	3	3599
90	9RU7\|1\|L5+ 9RU7\|1\|L8	WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)	ELECTRON MICROSCOPY	3	3527
91	8QFD\|1\|5+ 8QFD\|1\|8	UFL1 E3 ligase bound 60S ribosome	ELECTRON MICROSCOPY	2.2	3274
92	8JDM\|1\|D+ 8JDM\|1\|F	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)	ELECTRON MICROSCOPY	2.67	3668
93	8JDJ\|1\|D+ 8JDJ\|1\|F	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.5	3668
94	8JDK\|1\|D+ 8JDK\|1\|F	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.26	3668
95	8JDL\|1\|D+ 8JDL\|1\|F	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)	ELECTRON MICROSCOPY	2.42	3668
96	8IFD\|1\|1A+ 8IFD\|1\|1C	Dibekacin-added human 80S ribosome	ELECTRON MICROSCOPY	2.59	3873
97	8IFE\|1\|1A+ 8IFE\|1\|1C	Arbekacin-added human 80S ribosome	ELECTRON MICROSCOPY	2.57	3873
98	9KZU\|1\|L5+ 9KZU\|1\|L8	Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3	ELECTRON MICROSCOPY	3	3819
99	9M0P\|1\|L5+ 9M0P\|1\|L8	Cryo-EM structure of human 80S ribosome in complex with montanine	ELECTRON MICROSCOPY	2.78	3443
100	9GUL\|1\|L5+ 9GUL\|1\|L8	Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex	ELECTRON MICROSCOPY	2.2	3823
101	8FLF\|1\|L3+ 8FLF\|1\|L1	Human nuclear pre-60S ribosomal subunit (State L3)	ELECTRON MICROSCOPY	2.65	3479
102	8FLE\|1\|L3+ 8FLE\|1\|L1	Human nuclear pre-60S ribosomal subunit (State L2)	ELECTRON MICROSCOPY	2.48	3526
103	8FLD\|1\|L3+ 8FLD\|1\|L1	Human nuclear pre-60S ribosomal subunit (State L1)	ELECTRON MICROSCOPY	2.58	3526
104	8FL7\|1\|L3+ 8FL7\|1\|L1	Human nuclear pre-60S ribosomal subunit (State J2)	ELECTRON MICROSCOPY	2.55	3563
105	8FL6\|1\|L3+ 8FL6\|1\|L1	Human nuclear pre-60S ribosomal subunit (State J1)	ELECTRON MICROSCOPY	2.62	3559
106	8FLB\|1\|L3+ 8FLB\|1\|L1	Human nuclear pre-60S ribosomal subunit (State K2)	ELECTRON MICROSCOPY	2.55	3574
107	8FLA\|1\|L3+ 8FLA\|1\|L1	Human nuclear pre-60S ribosomal subunit (State K1)	ELECTRON MICROSCOPY	2.63	3574
108	8FL9\|1\|L3+ 8FL9\|1\|L1	Human nuclear pre-60S ribosomal subunit (State J3)	ELECTRON MICROSCOPY	2.75	3515
109	8FLC\|1\|L3+ 8FLC\|1\|L1	Human nuclear pre-60S ribosomal subunit (State K3)	ELECTRON MICROSCOPY	2.76	3527
110	8INF\|1\|2+ 8INF\|1\|8	human nuclear pre-60S ribosomal particle - State F'	ELECTRON MICROSCOPY	3	3808
111	8IDY\|1\|2+ 8IDY\|1\|8	human nuclear pre-60S ribosomal particle - State F	ELECTRON MICROSCOPY	3	3797
112	8IDT\|1\|2+ 8IDT\|1\|8	human nuclear pre-60S ribosomal particle - State G	ELECTRON MICROSCOPY	2.8	3680
113	8FL4\|1\|L3+ 8FL4\|1\|L1	Human nuclear pre-60S ribosomal subunit (State I3)	ELECTRON MICROSCOPY	2.89	3640
114	8FL3\|1\|L3+ 8FL3\|1\|L1	Human nuclear pre-60S ribosomal subunit (State I2)	ELECTRON MICROSCOPY	2.53	3648
115	8FL2\|1\|L3+ 8FL2\|1\|L1	Human nuclear pre-60S ribosomal subunit (State I1)	ELECTRON MICROSCOPY	2.67	3649
116	8RL2\|1\|L5+ 8RL2\|1\|L8	Human pre-60S - State 5	ELECTRON MICROSCOPY	2.84	3538
117	8FL0\|1\|L3	Human nucleolar pre-60S ribosomal subunit (State H)	ELECTRON MICROSCOPY	2.91	1558
118	8FKW\|1\|L3+ 8FKW\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State D2)	ELECTRON MICROSCOPY	2.5	2429
119	8FKU\|1\|L3+ 8FKU\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State C2)	ELECTRON MICROSCOPY	2.82	2337
120	8FKY\|1\|L3+ 8FKY\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State F)	ELECTRON MICROSCOPY	2.67	2740
121	8FKX\|1\|L3+ 8FKX\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State E)	ELECTRON MICROSCOPY	2.59	2402
122	8FKT\|1\|L3+ 8FKT\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State C1)	ELECTRON MICROSCOPY	2.81	2277
123	8FKV\|1\|L3+ 8FKV\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State D1)	ELECTRON MICROSCOPY	2.47	2365
124	8FKR\|1\|L3+ 8FKR\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State B1)	ELECTRON MICROSCOPY	2.89	1921
125	8FKP\|1\|L3+ 8FKP\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State A1)	ELECTRON MICROSCOPY	2.85	1659
126	8FKS\|1\|L3+ 8FKS\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State B2)	ELECTRON MICROSCOPY	2.88	1976
127	8FKQ\|1\|L3+ 8FKQ\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State A2)	ELECTRON MICROSCOPY	2.76	1715
128	8ONY\|1\|5	Human Methionine Aminopeptidase 2 at the 80S ribosome	ELECTRON MICROSCOPY	2.92	156

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_65061.65 Current

Release history

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