#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
18GLP|1|L5+ 8GLP|1|L8 (rep)Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)Electron microscopy1.6737022023-04-19
29TV2|1|L5+ 9TV2|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF0000280S ribosomes from primary B-cells infected with delta v-snoRNA1 EBVElectron microscopy2.132122026-07-01
39TT7|1|L5+ 9TT7|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF0000280S ribosome of WT EBV infected human B-cellsElectron microscopy2.232112026-07-22
49O3W|1|L5+ 9O3W|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human 80S ribosome bound to IDB-001 stalled on MYC nascent chainElectron microscopy1.937022026-03-04
58QYX|1|A2+ 8QYX|1|C2Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human 60S ribosomal subunitElectron microscopy1.7838622024-12-11
68YOO|1|L5+ 8YOO|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Cryo-EM structure of the human 80S ribosome with 100 um TigecyclineElectron microscopy238262024-07-10
78QFD|1|5+ 8QFD|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002UFL1 E3 ligase bound 60S ribosomeElectron microscopy2.232742024-02-21
89SPI|1|L5+ 9SPI|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINEElectron microscopy2.435622026-01-21
99C3H|1|L5+ 9C3H|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.Electron microscopy236792024-12-04
108A3D|1|A+ 8A3D|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Human mature large subunit of the ribosome with eIF6 and homoharringtonine boundElectron microscopy1.6734512023-03-08
119SPF|1|L5+ 9SPF|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINEElectron microscopy2.436222026-01-21
129O3V|1|L5+ 9O3V|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human 80S ribosome stalled on MYC nascent chainElectron microscopy2.237022026-03-04
139S3D|1|L5+ 9S3D|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002NAC bound human RNC with 58 amino acid ARF1-linkerElectron microscopy2.3238042026-02-18
149I2D|1|L5+ 9I2D|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002NMT1-NAC bound human RNC with 10 amino acid ARF1-linkerElectron microscopy2.1938042026-02-04
159S3B|1|L5+ 9S3B|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1Electron microscopy2.3838042026-02-18
169S3C|1|L5+ 9S3C|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2Electron microscopy2.4238042026-02-18
179QLO|1|L5+ 9QLO|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002NMT1-NAC bound human RNC with full length ARF1 - State 1Electron microscopy2.4738042026-02-18
189PBE|1|L5+ 9PBE|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNA [Homo sapiens]Homo sapiensEukaryaRF02543 + RF00002In situ human 80S ribosome (composite map)Electron microscopy2.1938112025-12-24
198G5Y|1|L5+ 8G5Y|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)Electron microscopy2.2938772023-04-19
209RUC|1|L5+ 9RUC|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)Electron microscopy2.533422026-05-13
219PKD|1|L5+ 9PKD|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ CHX and HHT treated 80S consensus ribosomeElectron microscopy2.4238112026-07-15
229QLQ|1|L5+ 9QLQ|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002NMT1-NAC bound human RNC with full length ARF1 - alternative StateElectron microscopy2.5738042026-02-18
238YOP|1|L5+ 8YOP|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Cryo-EM structure of the human 80S ribosome with 4 um TigecyclineElectron microscopy2.239272024-07-10
249O3Y|1|L5+ 9O3Y|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chainElectron microscopy2.237022026-03-04
259P7D|1|L5+ 9P7D|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human Hibernating class4 80S ribosomeElectron microscopy2.5738112025-12-24
268QOI|1|L5+ 8QOI|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA (3773-MER), 5.8S rRNA (156-MER)Homo sapiensEukaryaRF02543 + RF00002Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNAElectron microscopy1.939292024-06-12
279P8B|1|L5+ 9P8B|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human eEF1A-A/T-P-E state 80S ribosomeElectron microscopy2.4838112025-12-24
288G5Z|1|L5+ 8G5Z|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)Electron microscopy2.6438432023-04-19
298JDK|1|D+ 8JDK|1|FLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.2636682023-12-06
309P7E|1|L5+ 9P7E|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human Hibernating class5 80S ribosomeElectron microscopy2.5938112025-12-24
318G60|1|L5+ 8G60|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)Electron microscopy2.5437932023-04-19
329RPV|1|M5+ 9RPV|1|M8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA of the stalled 80S, 5.8S rRNA of the stalled 80SHomo sapiensEukaryaRF02543 + RF00002Structure of the ZAK-bound human disomeElectron microscopy2.3537022025-12-10
339GUL|1|L5+ 9GUL|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complexElectron microscopy2.238232025-09-24
346ZMI|1|L5+ 6ZMI|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexElectron microscopy2.639292020-08-19
359FQZ|1|L5+ 9FQZ|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA5.8S rRNA, LSU rRNAHomo sapiensEukaryaRF02543 + RF00002CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1Electron microscopy2.8536302026-01-14
3629IW|1|DA+ 29IW|1|DCLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.Electron microscopy1.7736392026-09-30
378XSX|1|L5+ 8XSX|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2Electron microscopy2.439272024-07-10
389QLP|1|L5+ 9QLP|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, RNA (156-MER)Homo sapiensEukaryaRF02543 + RF00002NMT1-NAC bound human RNC with full length ARF1 - State 2Electron microscopy2.7538042026-02-18
399T6D|1|L5+ 9T6D|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002NAA40-NAC bound human 80S (combined translation states)Electron microscopy2.6739282026-09-30
408JDL|1|D+ 8JDL|1|FLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)Electron microscopy2.4236682023-12-06
419P73|1|L5+ 9P73|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human eEF2-A/P-P/E state 80S ribosomeElectron microscopy2.6638112025-12-24
428JDJ|1|D+ 8JDJ|1|FLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)Electron microscopy2.536682023-12-06
437F5S|1|L5+ 7F5S|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002human delta-METTL18 60S ribosomeElectron microscopy2.7238712022-06-22
448OJ5|1|5+ 8OJ5|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF0000260S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)Electron microscopy2.936222024-02-21
458K2C|1|L5+ 8K2C|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Cryo-EM structure of the human 80S ribosome with TigecyclineElectron microscopy2.439272024-07-10
469P7O|1|L5+ 9P7O|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human AT-P-Z state ribosomeElectron microscopy2.6538112025-12-24
479RPV|1|L5+ 9RPV|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA of the collided 80S, 5.8S rRNA of the collided 80SHomo sapiensEukaryaRF02543 + RF00002Structure of the ZAK-bound human disomeElectron microscopy2.3537392025-12-10
489RUA|1|L5+ 9RUA|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)Electron microscopy2.936062026-06-03
4929IX|1|DA+ 29IX|1|DCLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.Electron microscopy2.236392026-09-30
509P7Y|1|L5+ 9P7Y|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNA [Homo sapiens]Homo sapiensEukaryaRF02543 + RF00002In situ human A-P-E state 80S ribosomeElectron microscopy2.7538112025-12-24
517XNY|1|L1+ 7XNY|1|L3Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellsElectron microscopy2.539292023-04-05
529P7C|1|L5+ 9P7C|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human Hibernating class3 80S ribosomeElectron microscopy2.7838112025-12-24
538FLE|1|L3+ 8FLE|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State L2)Electron microscopy2.4835262023-07-12
549PA7|1|L5+ 9PA7|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human 80S consensus ribosome with EBP1Electron microscopy2.6738112025-12-24
556ZM7|1|L5+ 6ZM7|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexElectron microscopy2.739292020-07-29
569P9J|1|L5+ 9P9J|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human 60S ribosomeElectron microscopy2.8738112025-12-24
579MNC|1|L5+ 9MNC|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human 80S ribosome bound to small molecule SW393071Electron microscopy2.3336562026-06-24
589P7A|1|L5+ 9P7A|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human hibernating class2 80S ribosomeElectron microscopy2.8138112025-12-24
599VXN|1|L5+ 9VXN|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAsElectron microscopy2.5138072026-07-22
609P7X|1|L5+ 9P7X|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human A-P-Z state 80S ribosomeElectron microscopy2.8338112025-12-24
619T6C|1|L5+ 9T6C|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002NAA40-NAC bound active human 80SElectron microscopy2.9137562026-09-30
629P9I|1|L5+ 9P9I|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human unrotated hibernating without CCDC124 state 80S ribosomeElectron microscopy2.7738112025-12-24
638JDM|1|D+ 8JDM|1|FLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)Electron microscopy2.6736682023-12-06
647OW7|1|A+ 7OW7|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002EIF6-bound large subunit of the human ribosomeElectron microscopy2.234512022-10-05
657XNX|1|L1+ 7XNX|1|L3Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellsElectron microscopy2.739292023-04-05
666QZP|1|L5+ 6QZP|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA (3773-MER), 5.8S rRNA (156-MER)Homo sapiensEukaryaRF02543 + RF00002High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.939292019-04-24
678IFD|1|1A+ 8IFD|1|1CLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Dibekacin-added human 80S ribosomeElectron microscopy2.5938732024-02-14
688FLB|1|L3+ 8FLB|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State K2)Electron microscopy2.5535742023-07-12
6929IZ|1|BA+ 29IZ|1|BCLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Dormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2Electron microscopy2.0835892026-09-30
708FLD|1|L3+ 8FLD|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State L1)Electron microscopy2.5835262023-07-12
718FL7|1|L3+ 8FL7|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State J2)Electron microscopy2.5535632023-07-12
729P72|1|L5+ 9P72|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNA [Homo sapiens]Homo sapiensEukaryaRF02543 + RF00002In situ human P-E state 80S ribosomeElectron microscopy2.838112025-12-24
739P7K|1|L5+ 9P7K|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human post eEF1A-A/T-P-E state 80S ribosomeElectron microscopy2.838112025-12-24
749P76|1|L5+ 9P76|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human eEF1A-A/T-P state 80S ribosomeElectron microscopy2.8338112025-12-24
759P9H|1|L5+ 9P9H|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human unrotated hibernating with CCDC124 state 80S ribosomeElectron microscopy2.8438112025-12-24
769P78|1|L5+ 9P78|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosomeElectron microscopy2.938112025-12-24
776Y2L|1|L5+ 6Y2L|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Structure of human ribosome in POST stateElectron microscopy337692020-04-15
788G61|1|L5+ 8G61|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)Electron microscopy2.9438132023-04-19
799P7N|1|L5+ 9P7N|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human Post-eEF1A-A/T-P-Z state 80S ribosomeElectron microscopy2.8338112025-12-24
808IFE|1|1A+ 8IFE|1|1CLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Arbekacin-added human 80S ribosomeElectron microscopy2.5738732024-02-14
819RU9|1|L5+ 9RU9|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA23S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)Electron microscopy2.9736792026-06-03
826Y6X|1|L5+ 6Y6X|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Tetracenomycin X bound to the human ribosomeElectron microscopy2.839292020-07-08
839GMO|1|A+ 9GMO|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16Electron microscopy2.5935422024-10-02
849P7W|1|L5+ 9P7W|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human A-P state 80S ribosomeElectron microscopy2.9338112025-12-24
856ZME|1|L5+ 6ZME|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexElectron microscopy339292020-08-12
869P6Z|1|L5+ 9P6Z|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human P-Z state 80S ribosomeElectron microscopy2.9738112025-12-24
879I2E|1|L5+ 9I2E|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002NMT1-NAC bound human ribosome (combined translational states)Electron microscopy2.9539282026-02-04
887QVP|1|L5+ 7QVP|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy337672022-10-12
899RU8|1|L5+ 9RU8|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)Electron microscopy335992026-06-03
908FL2|1|L3+ 8FL2|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State I1)Electron microscopy2.6736492023-07-12
919P7L|1|L5+ 9P7L|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human Post-eEF1A-AT-P state 80S ribosomeElectron microscopy2.9238112025-12-24
928FLA|1|L3+ 8FLA|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State K1)Electron microscopy2.6335742023-07-12
939RU7|1|L5+ 9RU7|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)Electron microscopy335272026-05-13
9422TU|1|L5+ 22TU|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human 80S ribosome in complex with DHX29Electron microscopy337752026-04-01
958FL6|1|L3+ 8FL6|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State J1)Electron microscopy2.6235592023-07-12
969KZU|1|L5+ 9KZU|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S_ribosomal_RNAHomo sapiensEukaryaRF02543 + RF00002Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3Electron microscopy338192025-12-03
978FL3|1|L3+ 8FL3|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State I2)Electron microscopy2.5336482023-07-12
989B0P|1|L5+ 9B0P|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA [Homo sapiens], 5.8S rRNA [Homo sapiens]Homo sapiensEukaryaRF02543 + RF00002In situ human Hibernating class1 80S ribosomeElectron microscopy2.8238962025-03-19
999GY4|1|5+ 9GY4|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF0000260S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)Electron microscopy336762025-05-14
1008IDT|1|2+ 8IDT|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002human nuclear pre-60S ribosomal particle - State GElectron microscopy2.836802023-08-09
1019WW4|1|AA+ 9WW4|1|ACLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA (3773-MER), 5.8S rRNA (156-MER)Homo sapiensEukaryaRF02543 + RF00002human 80S ribosome non-rotated stateElectron microscopy2.4839292026-09-16
1029P9K|1|L5+ 9P9K|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human 60S ribosome with EIF6Electron microscopy2.9638112025-12-24
1038G6J|1|L5+ 8G6J|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)Electron microscopy2.838432023-04-19
1049P8H|1|L5+ 9P8H|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In situ human A/P-P/E state 80S ribosomeElectron microscopy2.9838112025-12-24
1058INF|1|2+ 8INF|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002human nuclear pre-60S ribosomal particle - State F'Electron microscopy338082023-08-09
1068FLF|1|L3+ 8FLF|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State L3)Electron microscopy2.6534792023-07-12
1077QVP|1|L6+ 7QVP|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNAHomo sapiensEukaryaRF02543 + RF00002Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy337282022-10-12
1088XSY|1|L5+ 8XSY|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)Electron microscopy339272024-07-10
10928LN|1|B5+ 28LN|1|B8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002XBP1u-stalled RPL4 RNC in complex with NACElectron microscopy2.737942026-06-10
1106XA1|1|L5+ 6XA1|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Structure of a drug-like compound stalled human translation termination complexElectron microscopy2.836652020-10-07
1118FKV|1|L3+ 8FKV|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nucleolar pre-60S ribosomal subunit (State D1)Electron microscopy2.4723652023-07-12
1128FL9|1|L3+ 8FL9|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State J3)Electron microscopy2.7535152023-07-12
1138RL2|1|L5+ 8RL2|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human pre-60S - State 5Electron microscopy2.8435382025-01-15
1148FKW|1|L3+ 8FKW|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nucleolar pre-60S ribosomal subunit (State D2)Electron microscopy2.524292023-07-12
1158IDY|1|2+ 8IDY|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002human nuclear pre-60S ribosomal particle - State FElectron microscopy337972023-08-09
1168FLC|1|L3+ 8FLC|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State K3)Electron microscopy2.7635272023-07-12
1179M0P|1|L5+ 9M0P|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA|HOMO SAPIENS, 5.8S ribosomal RNA|HOMO SAPIENSHomo sapiensEukaryaRF02543 + RF00002Cryo-EM structure of human 80S ribosome in complex with montanineElectron microscopy2.7834432026-01-14
1189WW5|1|AA+ 9WW5|1|ACLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA (3773-MER), 5.8S rRNA (156-MER)Homo sapiensEukaryaRF02543 + RF00002human 80S ribosome rotated stateElectron microscopy2.6939292026-09-16
11929IY|1|CA+ 29IY|1|CCLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human monosomes, focus on 60S subunit; control.Electron microscopy2.3636392026-09-30
1208FKY|1|L3+ 8FKY|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nucleolar pre-60S ribosomal subunit (State F)Electron microscopy2.6727402023-07-12
1218FKX|1|L3+ 8FKX|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nucleolar pre-60S ribosomal subunit (State E)Electron microscopy2.5924022023-07-12
1228FL4|1|L3+ 8FL4|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nuclear pre-60S ribosomal subunit (State I3)Electron microscopy2.8936402023-07-12
1239QER|1|L5+ 9QER|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human pre-60S - State 1AElectron microscopy2.923782026-09-30
1248FKQ|1|L3+ 8FKQ|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nucleolar pre-60S ribosomal subunit (State A2)Electron microscopy2.7617152023-07-12
1258FKU|1|L3+ 8FKU|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nucleolar pre-60S ribosomal subunit (State C2)Electron microscopy2.8223372023-07-12
1268FKS|1|L3+ 8FKS|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nucleolar pre-60S ribosomal subunit (State B2)Electron microscopy2.8819762023-07-12
1278FKT|1|L3+ 8FKT|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nucleolar pre-60S ribosomal subunit (State C1)Electron microscopy2.8122772023-07-12
1289WW6|1|AA+ 9WW6|1|ACLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA (3773-MER), 5.8S rRNA (156-MER)Homo sapiensEukaryaRF02543 + RF00002human 80S ribosome delta eL41 non-rotated stateElectron microscopy2.8339262026-09-23
1298FKR|1|L3+ 8FKR|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nucleolar pre-60S ribosomal subunit (State B1)Electron microscopy2.8919212023-07-12
1308ONY|1|5Large subunit ribosomal RNA28S rRNAHomo sapiensEukaryaRF02543Human Methionine Aminopeptidase 2 at the 80S ribosomeElectron microscopy2.921562024-02-21
1318FKP|1|L3+ 8FKP|1|L1Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Human nucleolar pre-60S ribosomal subunit (State A1)Electron microscopy2.8516592023-07-12
1329WW7|1|AA+ 9WW7|1|ACLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA (3773-MER), 5.8S rRNA (156-MER)Homo sapiensEukaryaRF02543 + RF00002human 80S ribosome delta eL41 rotated stateElectron microscopy2.9139292026-09-30
1338FL0|1|L3Large subunit ribosomal RNA28S rRNAHomo sapiensEukaryaRF02543Human nucleolar pre-60S ribosomal subunit (State H)Electron microscopy2.9115582023-07-12
1346Z6N|1|L5+ 6Z6N|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)Electron microscopy2.939282020-07-29
1356Z6L|1|L5+ 6Z6L|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002Cryo-EM structure of human CCDC124 bound to 80S ribosomesElectron microscopy339282020-07-29
1369RG7|1|L5+ 9RG7|1|L8Large subunit ribosomal RNA + 5.8S ribosomal RNA28S rRNA, 5.8S rRNAHomo sapiensEukaryaRF02543 + RF00002In vitro reconstituted NAA40-NAC bound 80SElectron microscopy2.7238252026-06-17

Release history

Release4.59
Date2026-09-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
19TT7|1|L5+ 9TT7|1|L880S ribosome of WT EBV infected human B-cellsELECTRON MICROSCOPY2.23211
29TV2|1|L5+ 9TV2|1|L880S ribosomes from primary B-cells infected with delta v-snoRNA1 EBVELECTRON MICROSCOPY2.13212
328LN|1|B5+ 28LN|1|B8XBP1u-stalled RPL4 RNC in complex with NACELECTRON MICROSCOPY2.73794
49M0P|1|L5+ 9M0P|1|L8Cryo-EM structure of human 80S ribosome in complex with montanineELECTRON MICROSCOPY2.783443
59KZU|1|L5+ 9KZU|1|L8Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3ELECTRON MICROSCOPY33819
68IFE|1|1A+ 8IFE|1|1CArbekacin-added human 80S ribosomeELECTRON MICROSCOPY2.573873
78IFD|1|1A+ 8IFD|1|1CDibekacin-added human 80S ribosomeELECTRON MICROSCOPY2.593873
89RU7|1|L5+ 9RU7|1|L8WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)ELECTRON MICROSCOPY33527
99RU8|1|L5+ 9RU8|1|L8WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)ELECTRON MICROSCOPY33599
109RUA|1|L5+ 9RUA|1|L8RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)ELECTRON MICROSCOPY2.93606
118G5Z|1|L5+ 8G5Z|1|L8mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)ELECTRON MICROSCOPY2.643843
128G6J|1|L5+ 8G6J|1|L8mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)ELECTRON MICROSCOPY2.83843
138G61|1|L5+ 8G61|1|L8mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)ELECTRON MICROSCOPY2.943813
148G5Y|1|L5+ 8G5Y|1|L8mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)ELECTRON MICROSCOPY2.293877
158GLP|1|L5+ 8GLP|1|L8mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)ELECTRON MICROSCOPY1.673702
169RU9|1|L5+ 9RU9|1|L8RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)ELECTRON MICROSCOPY2.973679
179O3W|1|L5+ 9O3W|1|L8Human 80S ribosome bound to IDB-001 stalled on MYC nascent chainELECTRON MICROSCOPY1.93702
189O3Y|1|L5+ 9O3Y|1|L8Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chainELECTRON MICROSCOPY2.23702
199O3V|1|L5+ 9O3V|1|L8Human 80S ribosome stalled on MYC nascent chainELECTRON MICROSCOPY2.23702
209SPF|1|L5+ 9SPF|1|L8CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINEELECTRON MICROSCOPY2.43622
219SPI|1|L5+ 9SPI|1|L8CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINEELECTRON MICROSCOPY2.43562
229RPV|1|M5+ 9RPV|1|M8Structure of the ZAK-bound human disomeELECTRON MICROSCOPY2.353702
239RUC|1|L5+ 9RUC|1|L8WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)ELECTRON MICROSCOPY2.53342
248G60|1|L5+ 8G60|1|L8mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)ELECTRON MICROSCOPY2.543793
256XA1|1|L5+ 6XA1|1|L8Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.83665
268YOO|1|L5+ 8YOO|1|L8Cryo-EM structure of the human 80S ribosome with 100 um TigecyclineELECTRON MICROSCOPY23826
279RG7|1|L5+ 9RG7|1|L8In vitro reconstituted NAA40-NAC bound 80SELECTRON MICROSCOPY2.723825
288YOP|1|L5+ 8YOP|1|L8Cryo-EM structure of the human 80S ribosome with 4 um TigecyclineELECTRON MICROSCOPY2.23927
298K2C|1|L5+ 8K2C|1|L8Cryo-EM structure of the human 80S ribosome with TigecyclineELECTRON MICROSCOPY2.43927
308XSY|1|L5+ 8XSY|1|L8Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)ELECTRON MICROSCOPY33927
319C3H|1|L5+ 9C3H|1|L1Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.ELECTRON MICROSCOPY23679
329MNC|1|L5+ 9MNC|1|L1Human 80S ribosome bound to small molecule SW393071ELECTRON MICROSCOPY2.333656
339P7X|1|L5+ 9P7X|1|L8In situ human A-P-Z state 80S ribosomeELECTRON MICROSCOPY2.833811
349PKD|1|L5+ 9PKD|1|L8In situ CHX and HHT treated 80S consensus ribosomeELECTRON MICROSCOPY2.423811
359P7O|1|L5+ 9P7O|1|L8In situ human AT-P-Z state ribosomeELECTRON MICROSCOPY2.653811
369P7N|1|L5+ 9P7N|1|L8In situ human Post-eEF1A-A/T-P-Z state 80S ribosomeELECTRON MICROSCOPY2.833811
379P6Z|1|L5+ 9P6Z|1|L8In situ human P-Z state 80S ribosomeELECTRON MICROSCOPY2.973811
389FQZ|1|L5+ 9FQZ|1|L8CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1ELECTRON MICROSCOPY2.853630
398XSX|1|L5+ 8XSX|1|L8Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2ELECTRON MICROSCOPY2.43927
409T6D|1|L5+ 9T6D|1|L8NAA40-NAC bound human 80S (combined translation states)ELECTRON MICROSCOPY2.673928
419I2E|1|L5+ 9I2E|1|L8NMT1-NAC bound human ribosome (combined translational states)ELECTRON MICROSCOPY2.953928
429B0P|1|L5+ 9B0P|1|L8In situ human Hibernating class1 80S ribosomeELECTRON MICROSCOPY2.823896
439P8H|1|L5+ 9P8H|1|L8In situ human A/P-P/E state 80S ribosomeELECTRON MICROSCOPY2.983811
449P73|1|L5+ 9P73|1|L8In situ human eEF2-A/P-P/E state 80S ribosomeELECTRON MICROSCOPY2.663811
459P7E|1|L5+ 9P7E|1|L8In situ human Hibernating class5 80S ribosomeELECTRON MICROSCOPY2.593811
469P7D|1|L5+ 9P7D|1|L8In situ human Hibernating class4 80S ribosomeELECTRON MICROSCOPY2.573811
479P7C|1|L5+ 9P7C|1|L8In situ human Hibernating class3 80S ribosomeELECTRON MICROSCOPY2.783811
489P7A|1|L5+ 9P7A|1|L8In situ human hibernating class2 80S ribosomeELECTRON MICROSCOPY2.813811
499P78|1|L5+ 9P78|1|L8In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosomeELECTRON MICROSCOPY2.93811
509P9J|1|L5+ 9P9J|1|L8In situ human 60S ribosomeELECTRON MICROSCOPY2.873811
519P9K|1|L5+ 9P9K|1|L8In situ human 60S ribosome with EIF6ELECTRON MICROSCOPY2.963811
529P72|1|L5+ 9P72|1|L8In situ human P-E state 80S ribosomeELECTRON MICROSCOPY2.83811
539P9I|1|L5+ 9P9I|1|L8In situ human unrotated hibernating without CCDC124 state 80S ribosomeELECTRON MICROSCOPY2.773811
549P9H|1|L5+ 9P9H|1|L8In situ human unrotated hibernating with CCDC124 state 80S ribosomeELECTRON MICROSCOPY2.843811
559P8B|1|L5+ 9P8B|1|L8In situ human eEF1A-A/T-P-E state 80S ribosomeELECTRON MICROSCOPY2.483811
569P7K|1|L5+ 9P7K|1|L8In situ human post eEF1A-A/T-P-E state 80S ribosomeELECTRON MICROSCOPY2.83811
579P76|1|L5+ 9P76|1|L8In situ human eEF1A-A/T-P state 80S ribosomeELECTRON MICROSCOPY2.833811
589P7L|1|L5+ 9P7L|1|L8In situ human Post-eEF1A-AT-P state 80S ribosomeELECTRON MICROSCOPY2.923811
599PA7|1|L5+ 9PA7|1|L8In situ human 80S consensus ribosome with EBP1ELECTRON MICROSCOPY2.673811
609PBE|1|L5+ 9PBE|1|L8In situ human 80S ribosome (composite map)ELECTRON MICROSCOPY2.193811
619P7Y|1|L5+ 9P7Y|1|L8In situ human A-P-E state 80S ribosomeELECTRON MICROSCOPY2.753811
629P7W|1|L5+ 9P7W|1|L8In situ human A-P state 80S ribosomeELECTRON MICROSCOPY2.933811
636Y6X|1|L5+ 6Y6X|1|L8Tetracenomycin X bound to the human ribosomeELECTRON MICROSCOPY2.83929
646Z6N|1|L5+ 6Z6N|1|L8Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.93928
656Z6L|1|L5+ 6Z6L|1|L8Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY33928
666ZM7|1|L5+ 6ZM7|1|L8SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.73929
676ZMI|1|L5+ 6ZMI|1|L8SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.63929
686ZME|1|L5+ 6ZME|1|L8SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY33929
699QLQ|1|L5+ 9QLQ|1|L8NMT1-NAC bound human RNC with full length ARF1 - alternative StateELECTRON MICROSCOPY2.573804
709QLO|1|L5+ 9QLO|1|L8NMT1-NAC bound human RNC with full length ARF1 - State 1ELECTRON MICROSCOPY2.473804
719QLP|1|L5+ 9QLP|1|L8NMT1-NAC bound human RNC with full length ARF1 - State 2ELECTRON MICROSCOPY2.753804
729S3D|1|L5+ 9S3D|1|L8NAC bound human RNC with 58 amino acid ARF1-linkerELECTRON MICROSCOPY2.323804
739S3C|1|L5+ 9S3C|1|L8NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2ELECTRON MICROSCOPY2.423804
749S3B|1|L5+ 9S3B|1|L8NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1ELECTRON MICROSCOPY2.383804
759I2D|1|L5+ 9I2D|1|L8NMT1-NAC bound human RNC with 10 amino acid ARF1-linkerELECTRON MICROSCOPY2.193804
769T6C|1|L5+ 9T6C|1|L8NAA40-NAC bound active human 80SELECTRON MICROSCOPY2.913756
776Y2L|1|L5+ 6Y2L|1|L8Structure of human ribosome in POST stateELECTRON MICROSCOPY33769
787QVP|1|L5+ 7QVP|1|L8Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY33767
7922TU|1|L5+ 22TU|1|L8Human 80S ribosome in complex with DHX29ELECTRON MICROSCOPY33775
807XNY|1|L1+ 7XNY|1|L3High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellsELECTRON MICROSCOPY2.53929
817XNX|1|L1+ 7XNX|1|L3High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellsELECTRON MICROSCOPY2.73929
826QZP|1|L5+ 6QZP|1|L8High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.93929
837F5S|1|L5+ 7F5S|1|L8human delta-METTL18 60S ribosomeELECTRON MICROSCOPY2.723871
849WW5|1|AA+ 9WW5|1|AChuman 80S ribosome rotated stateELECTRON MICROSCOPY2.693929
859WW4|1|AA+ 9WW4|1|AChuman 80S ribosome non-rotated stateELECTRON MICROSCOPY2.483929
868QOI|1|L5+ 8QOI|1|L8Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNAELECTRON MICROSCOPY1.93929
879WW6|1|AA+ 9WW6|1|AChuman 80S ribosome delta eL41 non-rotated stateELECTRON MICROSCOPY2.833926
889WW7|1|AA+ 9WW7|1|AChuman 80S ribosome delta eL41 rotated stateELECTRON MICROSCOPY2.913929
899VXN|1|L5+ 9VXN|1|L8Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAsELECTRON MICROSCOPY2.513807
907QVP|1|L6+ 7QVP|1|L1Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY33728
919RPV|1|L5+ 9RPV|1|L8Structure of the ZAK-bound human disomeELECTRON MICROSCOPY2.353739
9229IZ|1|BA+ 29IZ|1|BCDormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2ELECTRON MICROSCOPY2.083589
938QYX|1|A2+ 8QYX|1|C2Human 60S ribosomal subunitELECTRON MICROSCOPY1.783862
9429IY|1|CA+ 29IY|1|CCHuman monosomes, focus on 60S subunit; control.ELECTRON MICROSCOPY2.363639
9529IX|1|DA+ 29IX|1|DCHuman monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.ELECTRON MICROSCOPY2.23639
9629IW|1|DA+ 29IW|1|DCHuman monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.ELECTRON MICROSCOPY1.773639
977OW7|1|A+ 7OW7|1|CEIF6-bound large subunit of the human ribosomeELECTRON MICROSCOPY2.23451
988A3D|1|A+ 8A3D|1|CHuman mature large subunit of the ribosome with eIF6 and homoharringtonine boundELECTRON MICROSCOPY1.673451
999GMO|1|A+ 9GMO|1|CeIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16ELECTRON MICROSCOPY2.593542
1009GY4|1|5+ 9GY4|1|860S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)ELECTRON MICROSCOPY33676
1018OJ5|1|5+ 8OJ5|1|860S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)ELECTRON MICROSCOPY2.93622
1028QFD|1|5+ 8QFD|1|8UFL1 E3 ligase bound 60S ribosomeELECTRON MICROSCOPY2.23274
1038JDL|1|D+ 8JDL|1|FStructure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)ELECTRON MICROSCOPY2.423668
1048JDJ|1|D+ 8JDJ|1|FStructure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)ELECTRON MICROSCOPY2.53668
1058JDK|1|D+ 8JDK|1|FStructure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.263668
1068JDM|1|D+ 8JDM|1|FStructure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)ELECTRON MICROSCOPY2.673668
1079GUL|1|L5+ 9GUL|1|L8Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complexELECTRON MICROSCOPY2.23823
1088FLF|1|L3+ 8FLF|1|L1Human nuclear pre-60S ribosomal subunit (State L3)ELECTRON MICROSCOPY2.653479
1098FLE|1|L3+ 8FLE|1|L1Human nuclear pre-60S ribosomal subunit (State L2)ELECTRON MICROSCOPY2.483526
1108FLD|1|L3+ 8FLD|1|L1Human nuclear pre-60S ribosomal subunit (State L1)ELECTRON MICROSCOPY2.583526
1118FL6|1|L3+ 8FL6|1|L1Human nuclear pre-60S ribosomal subunit (State J1)ELECTRON MICROSCOPY2.623559
1128FL7|1|L3+ 8FL7|1|L1Human nuclear pre-60S ribosomal subunit (State J2)ELECTRON MICROSCOPY2.553563
1138FLA|1|L3+ 8FLA|1|L1Human nuclear pre-60S ribosomal subunit (State K1)ELECTRON MICROSCOPY2.633574
1148FLB|1|L3+ 8FLB|1|L1Human nuclear pre-60S ribosomal subunit (State K2)ELECTRON MICROSCOPY2.553574
1158FLC|1|L3+ 8FLC|1|L1Human nuclear pre-60S ribosomal subunit (State K3)ELECTRON MICROSCOPY2.763527
1168FL9|1|L3+ 8FL9|1|L1Human nuclear pre-60S ribosomal subunit (State J3)ELECTRON MICROSCOPY2.753515
1178IDT|1|2+ 8IDT|1|8human nuclear pre-60S ribosomal particle - State GELECTRON MICROSCOPY2.83680
1188IDY|1|2+ 8IDY|1|8human nuclear pre-60S ribosomal particle - State FELECTRON MICROSCOPY33797
1198INF|1|2+ 8INF|1|8human nuclear pre-60S ribosomal particle - State F'ELECTRON MICROSCOPY33808
1208FL3|1|L3+ 8FL3|1|L1Human nuclear pre-60S ribosomal subunit (State I2)ELECTRON MICROSCOPY2.533648
1218FL2|1|L3+ 8FL2|1|L1Human nuclear pre-60S ribosomal subunit (State I1)ELECTRON MICROSCOPY2.673649
1228FL4|1|L3+ 8FL4|1|L1Human nuclear pre-60S ribosomal subunit (State I3)ELECTRON MICROSCOPY2.893640
1238RL2|1|L5+ 8RL2|1|L8Human pre-60S - State 5ELECTRON MICROSCOPY2.843538
1249QER|1|L5+ 9QER|1|L8Human pre-60S - State 1AELECTRON MICROSCOPY2.92378
1258FL0|1|L3Human nucleolar pre-60S ribosomal subunit (State H)ELECTRON MICROSCOPY2.911558
1268FKY|1|L3+ 8FKY|1|L1Human nucleolar pre-60S ribosomal subunit (State F)ELECTRON MICROSCOPY2.672740
1278FKX|1|L3+ 8FKX|1|L1Human nucleolar pre-60S ribosomal subunit (State E)ELECTRON MICROSCOPY2.592402
1288FKU|1|L3+ 8FKU|1|L1Human nucleolar pre-60S ribosomal subunit (State C2)ELECTRON MICROSCOPY2.822337
1298FKW|1|L3+ 8FKW|1|L1Human nucleolar pre-60S ribosomal subunit (State D2)ELECTRON MICROSCOPY2.52429
1308FKT|1|L3+ 8FKT|1|L1Human nucleolar pre-60S ribosomal subunit (State C1)ELECTRON MICROSCOPY2.812277
1318FKV|1|L3+ 8FKV|1|L1Human nucleolar pre-60S ribosomal subunit (State D1)ELECTRON MICROSCOPY2.472365
1328FKR|1|L3+ 8FKR|1|L1Human nucleolar pre-60S ribosomal subunit (State B1)ELECTRON MICROSCOPY2.891921
1338FKP|1|L3+ 8FKP|1|L1Human nucleolar pre-60S ribosomal subunit (State A1)ELECTRON MICROSCOPY2.851659
1348FKS|1|L3+ 8FKS|1|L1Human nucleolar pre-60S ribosomal subunit (State B2)ELECTRON MICROSCOPY2.881976
1358FKQ|1|L3+ 8FKQ|1|L1Human nucleolar pre-60S ribosomal subunit (State A2)ELECTRON MICROSCOPY2.761715
1368ONY|1|5Human Methionine Aminopeptidase 2 at the 80S ribosomeELECTRON MICROSCOPY2.92156

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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