Equivalence class NR_3.0_74023.17 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9GHG|1|a (rep) | Small subunit ribosomal RNA | 23S rRNA | Staphylococcus aureus subsp. aureus NCTC 8325 | Bacteria | RF00177 | Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU) | Electron microscopy | 2.22 | 1526 | 2025-03-26 |
| 2 | 9QEG|1|Aa | Small subunit ribosomal RNA | 16S ribosomal RNA | Staphylococcus aureus subsp. aureus USA300 | Bacteria | RF00177 | Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin | Electron microscopy | 2.21 | 1440 | 2025-06-04 |
| 3 | 9GHH|1|a | Small subunit ribosomal RNA | 16S rRNA | Staphylococcus aureus subsp. aureus NCTC 8325 | Bacteria | RF00177 | Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU) | Electron microscopy | 2.7 | 1526 | 2025-03-26 |
| 4 | 8BYV|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Staphylococcus aureus subsp. aureus NCTC 8325 | Bacteria | RF00177 | Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex | Electron microscopy | 2.89 | 1533 | 2023-12-27 |
| 5 | 5NGM|1|Aa | Small subunit ribosomal RNA | 16S ribosomal RNA | Staphylococcus aureus | Bacteria | RF00177 | 2.9S structure of the 70S ribosome composing the S. aureus 100S complex | Electron microscopy | 2.9 | 1539 | 2017-10-04 |
| 6 | 7ASP|1|X | Small subunit ribosomal RNA | 16S rRNA | Staphylococcus aureus | Bacteria | RF00177 | Staphylococcus aureus 70S after 50 minutes incubation at 37C | Electron microscopy | 2.86 | 1447 | 2021-11-17 |
| 7 | 6S0X|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Staphylococcus aureus | Bacteria | RF00177 | Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin. | Electron microscopy | 2.42 | 1539 | 2019-08-21 |
| 8 | 7P48|1|a | Small subunit ribosomal RNA | 16S rRNA | Staphylococcus aureus | Bacteria | RF00177 | Staphylococcus aureus ribosome in complex with Sal(B) | Electron microscopy | 2.9 | 1479 | 2022-02-02 |
| 9 | 8P2G|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Staphylococcus aureus subsp. aureus NCTC 8325 | Bacteria | RF00177 | Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state | Electron microscopy | 2.02 | 1534 | 2024-05-01 |
| 10 | 8P2F|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Staphylococcus aureus subsp. aureus NCTC 8325 | Bacteria | RF00177 | Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state | Electron microscopy | 2.44 | 1526 | 2024-05-01 |
| 11 | 8P2H|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Staphylococcus aureus subsp. aureus NCTC 8325 | Bacteria | RF00177 | Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state | Electron microscopy | 2.49 | 1534 | 2024-05-01 |
| 12 | 8Y38|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Staphylococcus aureus | Bacteria | RF00177 | Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190. | Electron microscopy | 2.58 | 1479 | 2024-07-24 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 7ASP|1|X | Staphylococcus aureus 70S after 50 minutes incubation at 37C | ELECTRON MICROSCOPY | 2.86 | 1447 | |
| 2 | 9QEG|1|Aa | Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin | ELECTRON MICROSCOPY | 2.21 | 1440 | |
| 3 | 8P2F|1|a | Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state | ELECTRON MICROSCOPY | 2.44 | 1526 | |
| 4 | 9GHH|1|a | Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU) | ELECTRON MICROSCOPY | 2.7 | 1526 | |
| 5 | 9GHG|1|a | Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU) | ELECTRON MICROSCOPY | 2.22 | 1526 | |
| 6 | 8Y38|1|a | Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190. | ELECTRON MICROSCOPY | 2.58 | 1479 | |
| 7 | 7P48|1|a | Staphylococcus aureus ribosome in complex with Sal(B) | ELECTRON MICROSCOPY | 2.9 | 1479 | |
| 8 | 5NGM|1|Aa | 2.9S structure of the 70S ribosome composing the S. aureus 100S complex | ELECTRON MICROSCOPY | 2.9 | 1539 | |
| 9 | 6S0X|1|a | Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin. | ELECTRON MICROSCOPY | 2.42 | 1539 | |
| 10 | 8BYV|1|a | Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex | ELECTRON MICROSCOPY | 2.89 | 1533 | |
| 11 | 8P2H|1|a | Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state | ELECTRON MICROSCOPY | 2.49 | 1534 | |
| 12 | 8P2G|1|a | Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state | ELECTRON MICROSCOPY | 2.02 | 1534 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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