Equivalence class NR_3.0_83277.10 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8OI5|1|3 (rep) | 5S ribosomal RNA | 5S | Candida albicans | Eukarya | RF00001 | Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM) | X-ray diffraction | 2.9 | 121 | 2024-10-09 |
| 2 | 8CRE|1|AT | 5S ribosomal RNA | 5S | Candida albicans | Eukarya | RF00001 | Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418 | X-ray diffraction | 3 | 121 | 2024-09-18 |
| 3 | 8CRE|1|3 | 5S ribosomal RNA | 5S | Candida albicans | Eukarya | RF00001 | Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418 | X-ray diffraction | 3 | 121 | 2024-09-18 |
| 4 | 8OI5|1|AT | 5S ribosomal RNA | 5S | Candida albicans | Eukarya | RF00001 | Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM) | X-ray diffraction | 2.9 | 121 | 2024-10-09 |
| 5 | 8C3A|1|3 | 5S ribosomal RNA | 5S | Candida albicans | Eukarya | RF00001 | Crystal structure of ailanthone bound to the Candida albicans 80S ribosome | X-ray diffraction | 3 | 121 | 2024-01-10 |
| 6 | 8C3A|1|AT | 5S ribosomal RNA | 5S | Candida albicans | Eukarya | RF00001 | Crystal structure of ailanthone bound to the Candida albicans 80S ribosome | X-ray diffraction | 3 | 121 | 2024-01-10 |
| 7 | 9G6J|1|3 | 5S ribosomal RNA | 5S rRNA | Candida albicans SC5314 | Eukarya | RF00001 | The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA | Electron microscopy | 2.15 | 121 | 2025-04-23 |
| 8 | 7PZY|1|3 | 5S ribosomal RNA | 5S ribosomal RNA | Candida albicans SC5314 | Eukarya | RF00001 | Structure of the vacant Candida albicans 80S ribosome | Electron microscopy | 2.32 | 121 | 2022-05-18 |
| 9 | 9G30|1|3 | 5S ribosomal RNA | 5S rRNA | Candida albicans | Eukarya | RF00001 | The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) shows strong density for the A site tRNA | Electron microscopy | 2.35 | 121 | 2025-04-23 |
| 10 | 8Q5I|1|3 | 5S ribosomal RNA | 5S | Candida albicans | Eukarya | RF00001 | Structure of Candida albicans 80S ribosome in complex with cephaeline | Electron microscopy | 2.45 | 121 | 2023-09-13 |
| 11 | 7Q08|1|3 | 5S ribosomal RNA | 5S ribosomal RNA | Candida albicans SC5314 | Eukarya | RF00001 | Structure of Candida albicans 80S ribosome in complex with cycloheximide | Electron microscopy | 2.56 | 121 | 2022-05-25 |
| 12 | 7Q0F|1|3 | 5S ribosomal RNA | 5S ribosomal RNA | Candida albicans SC5314 | Eukarya | RF00001 | Structure of Candida albicans 80S ribosome in complex with phyllanthoside | Electron microscopy | 2.64 | 121 | 2022-05-18 |
| 13 | 7Q0R|1|3 | 5S ribosomal RNA | 5S ribosomal RNA | Candida albicans SC5314 | Eukarya | RF00001 | Structure of the Candida albicans 80S ribosome in complex with blasticidin s | Electron microscopy | 2.67 | 121 | 2022-05-25 |
| 14 | 7Q0P|1|3 | 5S ribosomal RNA | 5S ribosomal RNA | Candida albicans SC5314 | Eukarya | RF00001 | Structure of the Candida albicans 80S ribosome in complex with anisomycin | Electron microscopy | 2.77 | 121 | 2022-05-18 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 8C3A|1|AT | Crystal structure of ailanthone bound to the Candida albicans 80S ribosome | X-RAY DIFFRACTION | 3 | 121 | |
| 2 | 8CRE|1|AT | Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418 | X-RAY DIFFRACTION | 3 | 121 | |
| 3 | 8C3A|1|3 | Crystal structure of ailanthone bound to the Candida albicans 80S ribosome | X-RAY DIFFRACTION | 3 | 121 | |
| 4 | 8CRE|1|3 | Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418 | X-RAY DIFFRACTION | 3 | 121 | |
| 5 | 8OI5|1|3 | Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM) | X-RAY DIFFRACTION | 2.9 | 121 | |
| 6 | 8OI5|1|AT | Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM) | X-RAY DIFFRACTION | 2.9 | 121 | |
| 7 | 7Q0F|1|3 | Structure of Candida albicans 80S ribosome in complex with phyllanthoside | ELECTRON MICROSCOPY | 2.64 | 121 | |
| 8 | 7Q08|1|3 | Structure of Candida albicans 80S ribosome in complex with cycloheximide | ELECTRON MICROSCOPY | 2.56 | 121 | |
| 9 | 8Q5I|1|3 | Structure of Candida albicans 80S ribosome in complex with cephaeline | ELECTRON MICROSCOPY | 2.45 | 121 | |
| 10 | 7Q0P|1|3 | Structure of the Candida albicans 80S ribosome in complex with anisomycin | ELECTRON MICROSCOPY | 2.77 | 121 | |
| 11 | 7Q0R|1|3 | Structure of the Candida albicans 80S ribosome in complex with blasticidin s | ELECTRON MICROSCOPY | 2.67 | 121 | |
| 12 | 7PZY|1|3 | Structure of the vacant Candida albicans 80S ribosome | ELECTRON MICROSCOPY | 2.32 | 121 | |
| 13 | 9G30|1|3 | The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) shows strong density for the A site tRNA | ELECTRON MICROSCOPY | 2.35 | 121 | |
| 14 | 9G6J|1|3 | The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA | ELECTRON MICROSCOPY | 2.15 | 121 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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