#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15FJC|1|A (rep)SAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant C-2bUX-ray diffraction1.712016-05-25
25FK4|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UUX-ray diffraction2.432016-05-25
32YGH|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch with a G2nA mutation in the Kink turn in complex with S-adenosylmethionineX-ray diffraction2.62011-09-07
43GX5|1|ARNA (94-MER)Crystal structure of T. tencongensis SAM-I riboswitch variant A94G/U34 bound with SAMX-ray diffraction2.42010-01-12
54B5R|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui K-t-7X-ray diffraction2.952013-01-30
65FK3|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CCX-ray diffraction2.52016-05-25
75FK2|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GGX-ray diffraction2.62016-05-25
85FKF|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UCX-ray diffraction2.82016-05-25
93GX3|1|ARNA (94-MER)Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAHX-ray diffraction2.72010-01-12
105FK6|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CAX-ray diffraction2.52016-05-25
113IQR|1|ASAM-I riboswitchSAM-I riboswitch from T. tencongensis variant A94G bound with SAMX-ray diffraction2.552010-08-04
127EAF|1|ASAM riboswitchRNA (94-MER)Caldanaerobacter subterraneus subsp. tengcongensisBacteriaRF00162Crystal structure of SAM-I riboswitch with the Actinomyces-1 k-turnX-ray diffraction2.852021-06-02
133IQP|1|ASAM-I riboswitchSAM-I riboswitch from T. tencongensis variant A94G apo formX-ray diffraction2.92010-08-04
143GX7|1|ARNA (94-MER)Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G mutant A6C/U7G/A87C/U88G bound with SAMX-ray diffraction2.952010-01-12
153IQN|1|ASAM-I riboswitchFree-state structural transitions of the SAM-I riboswitchX-ray diffraction2.72010-08-04
165FK1|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UGX-ray diffraction2.52016-05-25
175FKD|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UAX-ray diffraction32016-05-25
182GIS|1|ASAM-I riboswitchStructure of the S-adenosylmethionine riboswitch mRNA regulatory elementX-ray diffraction2.92006-07-04
192YDH|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162Crystal structure of the SAM-I riboswitch A94G U34 G18U G19U variant in complex with SAMX-ray diffraction2.92011-09-07
203GX2|1|ARNA (94-MER)TteSAM-I riboswitch variant A94GU34C bound to sinefunginX-ray diffraction2.92010-01-12
215FKH|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CUX-ray diffraction2.652016-05-25
225FKG|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CGX-ray diffraction2.952016-05-25
235FKE|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GUX-ray diffraction2.82016-05-25
243GX6|1|ARNA (94-MER)Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAM in manganese chlorideX-ray diffraction2.82010-01-12

Release history

Release3.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.3553.3563.3573.3583.3593.3603.3613.3623.3633.3643.3653.3663.3673.3683.3693.3703.3713.372
Date2021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-022024-10-092024-10-162024-10-232024-10-302024-11-062024-11-132024-11-202024-11-272024-12-042024-12-112024-12-182024-12-252025-01-012025-01-082025-01-152025-01-222025-01-29

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
12YGH|1|ASAM-I riboswitch with a G2nA mutation in the Kink turn in complex with S-adenosylmethionineX-RAY DIFFRACTION2.694
23IQP|1|ASAM-I riboswitch from T. tencongensis variant A94G apo formX-RAY DIFFRACTION2.994
33IQR|1|ASAM-I riboswitch from T. tencongensis variant A94G bound with SAMX-RAY DIFFRACTION2.5594
43IQN|1|AFree-state structural transitions of the SAM-I riboswitchX-RAY DIFFRACTION2.794
52GIS|1|AStructure of the S-adenosylmethionine riboswitch mRNA regulatory elementX-RAY DIFFRACTION2.994
63GX2|1|ATteSAM-I riboswitch variant A94GU34C bound to sinefunginX-RAY DIFFRACTION2.994
73GX5|1|ACrystal structure of T. tencongensis SAM-I riboswitch variant A94G/U34 bound with SAMX-RAY DIFFRACTION2.494
82YDH|1|ACrystal structure of the SAM-I riboswitch A94G U34 G18U G19U variant in complex with SAMX-RAY DIFFRACTION2.994
93GX6|1|ACrystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAM in manganese chlorideX-RAY DIFFRACTION2.894
103GX7|1|ACrystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G mutant A6C/U7G/A87C/U88G bound with SAMX-RAY DIFFRACTION2.9594
113GX3|1|ACrystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAHX-RAY DIFFRACTION2.794
127EAF|1|ACrystal structure of SAM-I riboswitch with the Actinomyces-1 k-turnX-RAY DIFFRACTION2.8595
135FKG|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CGX-RAY DIFFRACTION2.9594
145FKH|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CUX-RAY DIFFRACTION2.6594
155FK2|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GGX-RAY DIFFRACTION2.694
165FK3|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CCX-RAY DIFFRACTION2.595
175FKF|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UCX-RAY DIFFRACTION2.894
185FK1|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UGX-RAY DIFFRACTION2.594
195FK6|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CAX-RAY DIFFRACTION2.594
205FKD|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UAX-RAY DIFFRACTION394
215FKE|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GUX-RAY DIFFRACTION2.894
225FK4|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UUX-RAY DIFFRACTION2.4393
234B5R|1|ASAM-I riboswitch bearing the H. marismortui K-t-7X-RAY DIFFRACTION2.9594
245FJC|1|ASAM-I riboswitch bearing the H. marismortui Kt-7 variant C-2bUX-RAY DIFFRACTION1.7196

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0171 s