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Equivalence class NR_3.0_90506.33 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15TBW|1|1+ 5TBW|1|4 (rep)Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction333072017-07-26
25TBW|1|AR+ 5TBW|1|ATLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction333072017-07-26
34V88|1|A5+ 4V88|1|A8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction333082014-07-09
44V88|1|A1+ 4V88|1|A4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction333072014-07-09
56T4Q|1|C1+ 6T4Q|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.Electron microscopy2.633422019-12-25
66SNT|1|1+ 6SNT|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNA5.8S rRNA, Saccharomyces cerevisiae S288C 25S ribosomal RNA (RDN25-1), rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome stalled on SDD1 mRNA.Electron microscopy2.833422020-03-04
74U4R|1|1+ 4U4R|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.833072014-10-22
84U4R|1|5+ 4U4R|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.833082014-10-22
94U3U|1|5+ 4U3U|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.933082014-10-22
104U3U|1|1+ 4U3U|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.933072014-10-22
114U3M|1|1+ 4U3M|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25s rRNA, 5.8s rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction333072014-10-22
124U4Q|1|5+ 4U4Q|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction333082014-10-22
134U3M|1|5+ 4U3M|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25s rRNA, 5.8s rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction333082014-10-22
144U4U|1|1+ 4U4U|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction333072014-10-22
154U4Q|1|1+ 4U4Q|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction333072014-10-22
164U4U|1|5+ 4U4U|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction333082014-10-22
174U52|1|5+ 4U52|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction333082014-10-22
184U52|1|1+ 4U52|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction333072014-10-22

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
14U52|1|5+ 4U52|1|8Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION33308
24U4Q|1|5+ 4U4Q|1|8Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33308
34U4U|1|5+ 4U4U|1|8Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33308
44U3M|1|5+ 4U3M|1|8Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION33308
54U3U|1|5+ 4U3U|1|8Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.93308
64U4R|1|5+ 4U4R|1|8Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.83308
74V88|1|A5+ 4V88|1|A8The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION33308
85TBW|1|AR+ 5TBW|1|ATCrystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION33307
95TBW|1|1+ 5TBW|1|4Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION33307
104U3M|1|1+ 4U3M|1|4Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION33307
114U3U|1|1+ 4U3U|1|4Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.93307
124U4R|1|1+ 4U4R|1|4Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.83307
134V88|1|A1+ 4V88|1|A4The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION33307
144U4Q|1|1+ 4U4Q|1|4Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33307
154U4U|1|1+ 4U4U|1|4Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33307
164U52|1|1+ 4U52|1|4Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION33307
176SNT|1|1+ 6SNT|1|3Yeast 80S ribosome stalled on SDD1 mRNA.ELECTRON MICROSCOPY2.83342
186T4Q|1|C1+ 6T4Q|1|C3Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.ELECTRON MICROSCOPY2.63342

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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