Equivalence class NR_3.5_05217.5 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3HOY|1|P (rep) | 5'-R(*UP*AP*UP*AP*UP*GP*CP*A*UP*AP*AP*AP*GP*AP*CP*CP*AP*GP*GP*A)-3' | Complete RNA polymerase II elongation complex VI | X-ray diffraction | 3.4 | 10 | 2009-07-28 | ||||
| 2 | 5FLM|1|P | RNA, DNA-RNA ELONGATION SCAFFOLD | synthetic construct | Structure of transcribing mammalian RNA polymerase II | Electron microscopy | 3.4 | 14 | 2016-01-20 | |||
| 3 | 8HIM|1|P | RNA (5'-R(*UP*AP*UP*AP*UP*GP*CP*AP*UP*AP*AP*AP*GP*AP*CP*CP*AP*GP*GP*C)-3') | Brassica oleracea | A cryo-EM structure of B. oleracea RNA polymerase V elongation complex at 2.73 Angstrom | Electron microscopy | 2.8 | 11 | 2023-03-22 | |||
| 4 | 6HLR|1|R | RNA | Saccharomyces cerevisiae | Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP (core focused) | Electron microscopy | 3.18 | 9 | 2019-04-03 | |||
| 5 | 6HLQ|1|R | RNA | Saccharomyces cerevisiae | Yeast RNA polymerase I* elongation complex bound to nucleotide analog GMPCPP | Electron microscopy | 3.18 | 9 | 2019-04-03 | |||
| 6 | 6HKO|1|R | RNA | Saccharomyces cerevisiae | Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP | Electron microscopy | 3.42 | 9 | 2019-04-03 |
Release history
| Release | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 5FLM|1|P | Structure of transcribing mammalian RNA polymerase II | ELECTRON MICROSCOPY | 3.4 | 14 | |
| 2 | 6HKO|1|R | Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP | ELECTRON MICROSCOPY | 3.42 | 9 | |
| 3 | 6HLR|1|R | Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP (core focused) | ELECTRON MICROSCOPY | 3.18 | 9 | |
| 4 | 6HLQ|1|R | Yeast RNA polymerase I* elongation complex bound to nucleotide analog GMPCPP | ELECTRON MICROSCOPY | 3.18 | 9 | |
| 5 | 8HIM|1|P | A cryo-EM structure of B. oleracea RNA polymerase V elongation complex at 2.73 Angstrom | ELECTRON MICROSCOPY | 2.8 | 11 | |
| 6 | 3HOY|1|P | Complete RNA polymerase II elongation complex VI | X-RAY DIFFRACTION | 3.4 | 10 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: