Equivalence class NR_3.5_16139.3 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7QTT|1|d+ 7QTT|1|f+ 7QTT|1|g (rep) | U6 spliceosomal RNA + U2 splicesomal small nuclear RNA | MINX, U2snRNA, U6snRNA | Homo sapiens | Eukarya | RF00026 + RF00004 | Structural organization of a late activated human spliceosome (Baqr, core region) | Electron microscopy | 3.1 | 245 | 2023-05-10 |
| 2 | 6FF4|1|6+ 6FF4|1|2+ 6FF4|1|Z | U6 spliceosomal RNA + U2 splicesomal small nuclear RNA | pre mRNA, U2 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00026 + RF00004 | human Bact spliceosome core structure | Electron microscopy | 3.4 | 203 | 2018-08-29 |
| 3 | 9R3D|1|6 | U6 spliceosomal RNA | pre-mRNA, U6 snRNA | Homo sapiens | Eukarya | RF00026 | Cryo-EM structure of the human pre-Bact-OTS complex (whole map) | Electron microscopy | 3.12 | 85 | 2026-05-13 |
| 4 | 9J8P|1|B | U6 spliceosomal RNA | U6 snRNA | Homo sapiens | Eukarya | RF00026 | Cryo-EM structure of human TUT1 complexed with U6 snRNA | Electron microscopy | 3.21 | 106 | 2025-01-01 |
| 5 | 8RO2|1|6+ 8RO2|1|2 | U6 spliceosomal RNA + U2 splicesomal small nuclear RNA | U2 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00026 + RF00004 | Integrative Structure of the human intron lariat Spliceosome (ILS'') | Electron microscopy | 3.5 | 136 | 2024-09-18 |
Release history
| Release | 4.39 |
|---|---|
| Date | 2026-05-13 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 6FF4|1|6+ 6FF4|1|2+ 6FF4|1|Z | human Bact spliceosome core structure | ELECTRON MICROSCOPY | 3.4 | 203 | |
| 2 | 7QTT|1|d+ 7QTT|1|f+ 7QTT|1|g | Structural organization of a late activated human spliceosome (Baqr, core region) | ELECTRON MICROSCOPY | 3.1 | 245 | |
| 3 | 8RO2|1|6+ 8RO2|1|2 | Integrative Structure of the human intron lariat Spliceosome (ILS'') | ELECTRON MICROSCOPY | 3.5 | 136 | |
| 4 | 9R3D|1|6 | Cryo-EM structure of the human pre-Bact-OTS complex (whole map) | ELECTRON MICROSCOPY | 3.12 | 85 | |
| 5 | 9J8P|1|B | Cryo-EM structure of human TUT1 complexed with U6 snRNA | ELECTRON MICROSCOPY | 3.21 | 106 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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