Equivalence class NR_3.5_18569.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8H6L|1|4A (rep) | U4 spliceosomal RNA | pre-mRNA, U4 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00015 | Cryo-EM structure of human exon-defined spliceosome in the early B state. | Electron microscopy | 2.6 | 128 | 2024-05-01 |
| 2 | 8H6K|1|4A | U4 spliceosomal RNA | pre-mRNA, U4 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00015 | Cryo-EM structure of human exon-defined spliceosome in the mature B state. | Electron microscopy | 2.7 | 128 | 2024-05-01 |
| 3 | 6QW6|1|4 | U4 spliceosomal RNA | U4 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00015 | Structure of the human U5.U4/U6 tri-snRNP at 2.9A resolution. | Electron microscopy | 2.92 | 125 | 2019-04-17 |
| 4 | 8H6E|1|4A | U4 spliceosomal RNA | pre-mRNA, U4 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00015 | Cryo-EM structure of human exon-defined spliceosome in the late pre-B state. | Electron microscopy | 3.2 | 125 | 2024-05-01 |
| 5 | 8H6J|1|4A | U4 spliceosomal RNA | U4 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00015 | Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state. | Electron microscopy | 3.25 | 125 | 2024-05-01 |
| 6 | 6QX9|1|4 | U4 spliceosomal RNA | U4 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00015 | Structure of a human fully-assembled precatalytic spliceosome (pre-B complex). | Electron microscopy | 3.28 | 125 | 2019-04-17 |
| 7 | 8QOZ|1|4 | U4 spliceosomal RNA | 5'ss RNA oligo, U4 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00015 | Cryo-EM Structure of Pre-B+5'ss+ATPgammaS Complex (core part) | Electron microscopy | 3.1 | 80 | 2024-05-22 |
| 8 | 8Q7N|1|4 | U4 spliceosomal RNA | U4 snRNA | Homo sapiens | Eukarya | RF00015 | cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region) | Electron microscopy | 3.1 | 76 | 2024-01-24 |
| 9 | 8QPE|1|4 | U4 spliceosomal RNA | oligo1, oligo2, U4 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00015 | Cryo-EM Structure of Pre-B-like Complex (core part) | Electron microscopy | 3.1 | 63 | 2024-05-22 |
| 10 | 8QP8|1|4 | U4 spliceosomal RNA | U4 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00015 | Cryo-EM Structure of Pre-B Complex (core part) | Electron microscopy | 3.5 | 76 | 2024-05-22 |
Release history
| Release | 3.336 | 3.337 | 3.338 | 3.339 | 3.340 | 3.341 | 3.342 | 3.343 | 3.344 | 3.345 | 3.346 | 3.347 | 3.348 | 3.349 | 3.350 | 3.351 | 3.352 | 3.353 | 3.354 | 3.355 | 3.356 | 3.357 | 3.358 | 3.359 | 3.360 | 3.361 | 3.362 | 3.363 | 3.364 | 3.365 | 3.366 | 3.367 | 3.368 | 3.369 | 3.370 | 3.371 | 3.372 | 3.373 | 3.374 | 3.375 | 3.376 | 3.377 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-05-22 | 2024-05-29 | 2024-06-05 | 2024-06-12 | 2024-06-19 | 2024-06-26 | 2024-07-03 | 2024-07-10 | 2024-07-17 | 2024-07-25 | 2024-07-31 | 2024-08-07 | 2024-08-14 | 2024-08-21 | 2024-08-28 | 2024-09-04 | 2024-09-11 | 2024-09-18 | 2024-09-25 | 2024-10-02 | 2024-10-09 | 2024-10-16 | 2024-10-23 | 2024-10-30 | 2024-11-06 | 2024-11-13 | 2024-11-20 | 2024-11-27 | 2024-12-04 | 2024-12-11 | 2024-12-18 | 2024-12-25 | 2025-01-01 | 2025-01-08 | 2025-01-15 | 2025-01-22 | 2025-01-29 | 2025-02-05 | 2025-02-12 | 2025-02-19 | 2025-02-26 | 2025-03-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 8H6E|1|4A | Cryo-EM structure of human exon-defined spliceosome in the late pre-B state. | ELECTRON MICROSCOPY | 3.2 | 125 | |
| 2 | 8H6J|1|4A | Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state. | ELECTRON MICROSCOPY | 3.25 | 125 | |
| 3 | 6QX9|1|4 | Structure of a human fully-assembled precatalytic spliceosome (pre-B complex). | ELECTRON MICROSCOPY | 3.28 | 125 | |
| 4 | 6QW6|1|4 | Structure of the human U5.U4/U6 tri-snRNP at 2.9A resolution. | ELECTRON MICROSCOPY | 2.92 | 125 | |
| 5 | 8QP8|1|4 | Cryo-EM Structure of Pre-B Complex (core part) | ELECTRON MICROSCOPY | 3.5 | 76 | |
| 6 | 8H6L|1|4A | Cryo-EM structure of human exon-defined spliceosome in the early B state. | ELECTRON MICROSCOPY | 2.6 | 128 | |
| 7 | 8H6K|1|4A | Cryo-EM structure of human exon-defined spliceosome in the mature B state. | ELECTRON MICROSCOPY | 2.7 | 128 | |
| 8 | 8Q7N|1|4 | cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region) | ELECTRON MICROSCOPY | 3.1 | 76 | |
| 9 | 8QPE|1|4 | Cryo-EM Structure of Pre-B-like Complex (core part) | ELECTRON MICROSCOPY | 3.1 | 63 | |
| 10 | 8QOZ|1|4 | Cryo-EM Structure of Pre-B+5'ss+ATPgammaS Complex (core part) | ELECTRON MICROSCOPY | 3.1 | 80 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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