Equivalence class NR_3.5_22409.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9KDW|1|S6 (rep) | Transfer RNA | A/P, P/E tRNA, RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') | Mus musculus | Eukarya | RF00005 | Cryo-EM structure of 80S ribosome | Electron microscopy | 2.67 | 75 | 2026-05-13 |
| 2 | 7LS2|1|n2 | Transfer RNA | tRNA | Mus musculus | Eukarya | RF00005 | 80S ribosome from mouse bound to eEF2 (Class I) | Electron microscopy | 3.1 | 75 | 2021-11-03 |
| 3 | 7CPU|1|S6 | Transfer RNA | Met-tRNA | Mus musculus | Eukarya | RF00005 | Cryo-EM structure of 80S ribosome from mouse kidney | Electron microscopy | 2.82 | 75 | 2022-02-02 |
| 4 | 9KDV|1|S6 | Transfer RNA | A*, P/E tRNA, RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') | Mus musculus | Eukarya | RF00005 | Cryo-EM structure of 80S ribosome | Electron microscopy | 3.33 | 75 | 2026-05-13 |
| 5 | 7CPV|1|S6 | Transfer RNA | Met-tRNA | Mus musculus | Eukarya | RF00005 | Cryo-EM structure of 80S ribosome from mouse testis | Electron microscopy | 3.03 | 75 | 2022-02-02 |
| 6 | 9KDT|1|S6 | Transfer RNA | P/P, E/E tRNA | Mus musculus | Eukarya | RF00005 | Cryo-EM structure of 80S ribosome | Electron microscopy | 2.63 | 75 | 2026-05-13 |
| 7 | 9H4N|1|n2 | Transfer RNA | Transfer RNA | Mus musculus | Eukarya | RF00005 | RPL13 (eL13)-mutant 80S ribosome from mouse | Electron microscopy | 2.46 | 75 | 2025-11-05 |
| 8 | 7LS1|1|n2 | Transfer RNA | tRNA | Mus musculus | Eukarya | RF00005 | 80S ribosome from mouse bound to eEF2 (Class II) | Electron microscopy | 3.3 | 75 | 2021-11-03 |
Release history
| Release | 4.39 |
|---|---|
| Date | 2026-05-13 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 7CPU|1|S6 | Cryo-EM structure of 80S ribosome from mouse kidney | ELECTRON MICROSCOPY | 2.82 | 75 | |
| 2 | 7CPV|1|S6 | Cryo-EM structure of 80S ribosome from mouse testis | ELECTRON MICROSCOPY | 3.03 | 75 | |
| 3 | 9KDV|1|S6 | Cryo-EM structure of 80S ribosome | ELECTRON MICROSCOPY | 3.33 | 75 | |
| 4 | 9KDW|1|S6 | Cryo-EM structure of 80S ribosome | ELECTRON MICROSCOPY | 2.67 | 75 | |
| 5 | 9KDT|1|S6 | Cryo-EM structure of 80S ribosome | ELECTRON MICROSCOPY | 2.63 | 75 | |
| 6 | 7LS1|1|n2 | 80S ribosome from mouse bound to eEF2 (Class II) | ELECTRON MICROSCOPY | 3.3 | 75 | |
| 7 | 9H4N|1|n2 | RPL13 (eL13)-mutant 80S ribosome from mouse | ELECTRON MICROSCOPY | 2.46 | 75 | |
| 8 | 7LS2|1|n2 | 80S ribosome from mouse bound to eEF2 (Class I) | ELECTRON MICROSCOPY | 3.1 | 75 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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