#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18AZW|1|A+ 8AZW|1|B (rep)Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNANicotiana tabacumEukaryaRF02543 + RF00002Cryo-EM structure of the plant 60S subunitElectron microscopy2.142023-06-07
27QIW|1|2+ 7QIW|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASolanum lycopersicumEukaryaRF02543 + RF00002Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.Electron microscopy2.352022-07-13
37QIZ|1|2+ 7QIZ|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASolanum lycopersicumEukaryaRF02543 + RF00002Specific features and methylation sites of a plant 80S ribosomeElectron microscopy2.382022-08-03

Release history

Release3.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.296
Date2023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_28129.2NR_3.5_28129.13.286(2) 7QIW|1|2+7QIW|1|8, 7QIZ|1|2+7QIZ|1|8(1) 8AZW|1|A+8AZW|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_28129.2NR_3.5_28129.33.297(3) 7QIW|1|2+7QIW|1|8, 7QIZ|1|2+7QIZ|1|8, 8AZW|1|A+8AZW|1|B(0) (1) 8B2L|1|A3+8B2L|1|B3

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17QIW|1|2+ 7QIW|1|8Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.ELECTRON MICROSCOPY2.352975
27QIZ|1|2+ 7QIZ|1|8Specific features and methylation sites of a plant 80S ribosomeELECTRON MICROSCOPY2.382975
38AZW|1|A+ 8AZW|1|BCryo-EM structure of the plant 60S subunitELECTRON MICROSCOPY2.143066

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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