#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15L4O|1|A (rep)Transfer RNAtRNA (76-MER)Escherichia coliBacteriaRF00005Structure of an E.coli initiator tRNAfMet A1-U72 variantX-ray diffraction2.8762017-03-01
25HCQ|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
38G2C|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.65772023-12-27
48G2A|1|1xTransfer RNAP-site Peptidyl-tRNA fMTHSMRC-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45772023-12-27
58UD7|1|1xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.55762024-02-21
64V6G|1|CCTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.5772014-07-09
78G29|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.55772023-12-27
88G2A|1|2xTransfer RNAP-site Peptidyl-tRNA fMTHSMRC-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45772023-12-27
98G29|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.55772023-12-27
108G2C|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.65772023-12-27
114WQ1|1|2KTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.1772015-06-10
125IBB|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.96772016-05-25
138EKB|1|1xTransfer RNAM-Stop-mRNA, P-site deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-ray diffraction2.7762022-12-21
146CAE|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-04-18
158UD7|1|2xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.55762024-02-21
167U2J|1|1xTransfer RNAMG-mRNA, P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.55772022-07-13
178G2B|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.55762023-12-27
188UD8|1|1xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.6762024-02-21
198UD6|1|1xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.7762024-02-21
204WQR|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.15772015-06-10
215HCQ|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
228EKB|1|2xTransfer RNAM-Stop-mRNA, P-site deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-ray diffraction2.7762022-12-21
238UD8|1|2xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.6762024-02-21
247OSA|1|PSITTransfer RNAMRNA, Psite tRNA-PheEscherichia coliBacteriaRF00005Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction3772021-12-08
257U2H|1|1xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-ray diffraction2.55772022-07-13
268G2B|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.55762023-12-27
275IB7|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.99772016-05-25
284V8D|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction3772014-07-09
297RQ8|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.5762021-10-13
305HCR|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
314Z8C|1|1xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.9762015-05-20
325J4B|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762016-04-27
337U2J|1|2xTransfer RNAMG-mRNA, P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.55772022-07-13
344WQ1|1|2LTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.1772015-06-10
356XHY|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.6762020-12-23
365EL7|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.15772016-01-27
374WSD|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.95772015-06-10
388UD6|1|2xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.7762024-02-21
398EV7|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.89762023-08-09
404V8D|1|ACTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction3772014-07-09
415IBB|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.96762016-05-25
426XHY|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.6762020-12-23
435J4B|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762016-04-27
444Z8C|1|2xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.9762015-05-20
454WSD|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.95772015-06-10
466CAE|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-04-18
474WT1|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.05772015-06-10
484WQR|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.15772015-06-10
495J4C|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8762016-04-27
504WPO|1|BXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.8762015-01-28
515W4K|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762017-08-30
521VY4|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.6762014-08-20
536OF1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-ray diffraction2.8762019-04-17
544V6G|1|ACTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.5772014-07-09
555DFE|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.1772016-10-12
566QNQ|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.5772019-06-19
576XHW|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.5762020-12-23
584W2H|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.7762014-10-15
597RQ8|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.5762021-10-13
605HCR|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
615EL7|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.15772016-01-27
625HD1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.7762016-04-06
634LNT|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.94772014-08-06
645HCP|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.89762016-04-06
656OF1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-ray diffraction2.8762019-04-17
668CVK|1|1xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5772022-10-19
675HAU|1|1wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3762016-04-06
685J4C|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8762016-04-27
697U2I|1|1xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.55772022-07-13
704W2I|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.7762014-10-15
716XHV|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.4762020-12-23
725WIS|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762018-02-14
735IB7|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.99772016-05-25
745EL6|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.1772016-01-27
754WT1|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.05772015-06-10
765IB8|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-ray diffraction3.13772016-05-25
774W2G|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.55762014-10-15
786XQD|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-ray diffraction2.8762020-08-05
796ND5|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.6762019-03-20
804LNT|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.94772014-08-06
814W2H|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.7762014-10-15
824V7M|1|AXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.45772014-07-09
835W4K|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762017-08-30
848EV7|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.89762023-08-09
854YZV|1|XVTransfer RNAmessenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.1772015-10-21
868CVK|1|2xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5772022-10-19
877U2H|1|2xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-ray diffraction2.55772022-07-13
888G2D|1|1xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.7762023-12-27
895DFE|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.1772016-10-12
904WRA|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.05772015-06-10
916XHW|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.5762020-12-23
924WRA|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.05772015-06-10
935EL6|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.1772016-01-27
945HAU|1|2wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3762016-04-06
955E7K|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.2772016-01-27
966XQD|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-ray diffraction2.8762020-08-05
976XHV|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.4762020-12-23
985IB8|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-ray diffraction3.13772016-05-25
994V9S|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.1762014-07-09
1004Y4P|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.5762015-03-18
1014W2G|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.55762014-10-15
1024WR6|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.05772015-06-10
1036O97|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-ray diffraction2.75762019-04-17
1048CVJ|1|1xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMSEAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4772022-10-19
1054WR6|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.05772015-06-10
1063CW5|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.1772008-09-02
1075EL4|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.15772016-01-27
1085HCP|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.89762016-04-06
1095DOY|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.6762015-12-30
1104ZER|1|1xTransfer RNAmRNA, tRNA metEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.1762015-05-20
1115WIT|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-02-14
1124W4G|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.3772015-10-21
1135EL5|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.15772016-01-27
1145VP2|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8762017-06-28
1156QNQ|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.5772019-06-19
1168EV6|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.946762023-08-09
1175HD1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.7762016-04-06
1184W2I|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.7762014-10-15
1194V9S|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.1762014-07-09
1206ND5|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.6762019-03-20
1218CVJ|1|2xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMSEAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4772022-10-19
1228CVL|1|1xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMTHSMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.3772022-10-19
1235E7K|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.2772016-01-27
1247RQ9|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.6762021-10-13
1251VY7|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.8762014-08-20
1264Z3S|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.65762015-06-03
1278G2D|1|2xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.7762023-12-27
1281VY4|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.6762014-08-20
1294W2F|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.4762014-10-15
1301VY5|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.55762014-08-20
1314YZV|1|QVTransfer RNAmessenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.1772015-10-21
1324WPO|1|DXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.8762015-01-28
1334V51|1|CVTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.8772014-07-09
1344V8Q|1|BVTransfer RNAE-SITE or P-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.1772014-07-09
1357JQL|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction3762020-08-26
1367U2I|1|2xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.55772022-07-13
1378CVL|1|2xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMTHSMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.3772022-10-19
1387JQM|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolutionX-ray diffraction3.05762020-08-26
1394YPB|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.4772015-10-21
1407JQL|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction3762020-08-26
1414W4G|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.3772015-10-21
1424V9R|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction3762014-07-09
1434WZO|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.3772015-06-10
1447RQ9|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.6762021-10-13
1455EL4|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.15762016-01-27
1464V9R|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction3762014-07-09
1474W2F|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.4762014-10-15
1485WIS|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762018-02-14
1494WRO|1|2KTransfer RNARNA (30-MER), tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.05772015-06-10
1504V8E|1|DCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.3772014-07-09
1514V51|1|AVTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.8772014-07-09
1526ND6|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.85762019-02-20
1534V5C|1|AVTransfer RNAMRNA, P-SITE TRNA FMETEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.3772014-07-09
1546O97|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-ray diffraction2.75762019-04-17
1554Y4P|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.5762015-03-18
1567JQM|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolutionX-ray diffraction3.05762020-08-26
1571VY6|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.9762014-08-20
1584Z3S|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.65762015-06-03
1594ZER|1|2xTransfer RNAmRNA, tRNA metEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.1762015-05-20
1606UO1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.95762019-11-27
1616UO1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.95762019-11-27
1625VP2|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8762017-06-28
1631VY6|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.9762014-08-20
1648EV6|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.946762023-08-09
1654WQY|1|BXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.8762015-01-28
1665DOY|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.6762015-12-30
1674WRO|1|2LTransfer RNARNA (30-MER), tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.05772015-06-10
1685WIT|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-02-14
1694V8F|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.3772014-07-09
1705F8K|1|1xTransfer RNAmRNA, tRNAiMetEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-02-03
1714V5C|1|CVTransfer RNAMRNA, P-SITE TRNA FMETEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.3772014-07-09
1724V87|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.1772014-07-09
1737OSM|1|PSITTransfer RNAFMET tRNA, MRNAEscherichia coliBacteriaRF00005Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction3772021-12-08
1744WZO|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.3772015-06-10
1756ND6|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.85762019-02-20
1761VY5|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.55762014-08-20
1774YPB|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.4772015-10-21
1784V8B|1|ACTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
1794LT8|1|XVTransfer RNAA-site ASL Pro, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.14772014-08-06
1804V87|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.1772014-07-09
1814V8C|1|DCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.3772014-07-09
1825EL5|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.15772016-01-27
1834V7M|1|CXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), RNA (77-MER)Escherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.45772014-07-09
1844V8E|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.3772014-07-09
1856XQE|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction3762020-08-05
1867LH5|1|AVTransfer RNAE-Site tRNA Phe and A-site tRNA Phe, mRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-ray diffraction3.27762021-06-02
1874V9I|1|AVTransfer RNAmRNA, P-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.3772014-07-09
1887LH5|1|CVTransfer RNAE-Site tRNA Phe and A-site tRNA Phe, mRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-ray diffraction3.27772021-06-02
1896GSK|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-ray diffraction3.36772018-07-04
1904V67|1|AYTransfer RNAMRNA, P AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
1916XQE|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction3762020-08-05
1924V7L|1|CXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction3772014-07-09
1934V8B|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
1944V7L|1|AXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction3772014-07-09
1954LT8|1|QVTransfer RNAA-site ASL Pro, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.14772014-08-06
1964V8C|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.3772014-07-09
1974V5K|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.2772014-07-09
1985F8K|1|2xTransfer RNAmRNA, tRNAiMetEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-02-03
1994V67|1|CYTransfer RNAMRNA, P AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
2001VVJ|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.44772014-08-06
2016QNQ|1|3KTransfer RNAE. coli tRNAfMetEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.5772019-06-19
2024WQY|1|DXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.8762015-01-28
2031VY7|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.8762014-08-20
2045CZP|1|XVTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.3772016-10-12
2056GSK|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-ray diffraction3.36772018-07-04
2065CZP|1|QVTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.3772016-10-12
2074V9I|1|CVTransfer RNAmRNA, P-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.3772014-07-09
2084V8F|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.3772014-07-09
2094LSK|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.48772014-08-06
2104V6G|1|CDTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.5772014-07-09
2114V63|1|AYTransfer RNAmRNA, P and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.21772014-07-09
2124LSK|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.48772014-08-06
2134V63|1|CYTransfer RNAmRNA, P and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.21772014-07-09
2141VVJ|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.44772014-08-06
2153CW6|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.3772008-09-02
2163QSY|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-ray diffraction3.2772012-03-21
2176QNQ|1|3LTransfer RNAE. coli tRNAfMetEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.5772019-06-19
2186B4V|1|HBTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.4772018-02-07
2194V6G|1|ADTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.5772014-07-09
2204V8C|1|DDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.3772014-07-09
2214WZO|1|1KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.3702015-06-10
2226B4V|1|IATransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.4772018-02-07
2236B4V|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.4772018-02-07
2244V5K|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.2772014-07-09
2256B4V|1|MCTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.4772018-02-07
2264V8C|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.3772014-07-09
2274V8B|1|ADTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
2284V87|1|BDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.1772014-07-09
2296QNQ|1|1KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.5652019-06-19
2304W4G|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.3772015-10-21
2314W4G|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.3772015-10-21
2324V87|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.1772014-07-09
2334V63|1|CZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.21772014-07-09
2344V8B|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
2354V67|1|AZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
2364V63|1|AZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.21772014-07-09
2374V6G|1|CBTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.5652014-07-09
2384V67|1|CZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
2394V5K|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.2772014-07-09
2404V5K|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.2772014-07-09
2414YPB|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.4772015-10-21
2424YPB|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.4772015-10-21
2434V5A|1|AWTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.5772014-07-09
2444V5A|1|CWTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.5772014-07-09
2454V8Q|1|BWTransfer RNAE-SITE or P-SITE TRNA FMETEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.1772014-07-09
2466GSJ|1|2LTransfer RNARNA (27-MER), tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-ray diffraction2.96772018-07-04
2475J4D|1|NCTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.1772016-05-18
2486GSJ|1|2KTransfer RNARNA (27-MER), tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-ray diffraction2.96772018-07-04
2495J4D|1|IATransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.1772016-05-18
2504V6A|1|CWTransfer RNARNA (5'-R(P*AP*AP*AP*UP*G)-3'), tRNA-MetEscherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.1772014-07-09
2514V6A|1|AWTransfer RNARNA (5'-R(P*AP*AP*AP*UP*G)-3'), tRNA-MetEscherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.1772014-07-09
2525J4D|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.1772016-05-18
2535J4D|1|IBTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.1772016-05-18
2546GSL|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-ray diffraction3.16772018-07-04
2556GSL|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-ray diffraction3.16772018-07-04
2566BOH|1|NCTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.4772018-05-23
2576BOH|1|IATransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.4772018-05-23
2586BOH|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.4772018-05-23
2596BOH|1|IBTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.4772018-05-23
2608B0X|1|ZTransfer RNAmRNA, P-site tRNAEscherichia coli BBacteriaRF00005Translating 70S ribosome in the unrotated state (P and E, tRNAs)Electron microscopy1.55752022-11-30
2618FTO|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S ribosome with an improved MS2 tag inserted in H98Electron microscopy1.85762023-08-02
2628CCS|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF0000580S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complexElectron microscopy1.97772023-09-20
2638AYE|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S ribosome bound to thermorubin and fMet-tRNAElectron microscopy1.96762023-03-01
2647K00|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.98762020-09-23
2658P2G|1|DTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric stateElectron microscopy2.02772024-05-01
2668CDR|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.04772023-09-20
2678CEH|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.05772023-09-20
2688G6W|1|ZTransfer RNAmRNA, P-site fMet-tRNAfMetEscherichia coliBacteriaRF00005Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.02752023-04-05
2698BIL|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.Electron microscopy2.04772023-08-16
2708EMM|1|YTransfer RNAMet-NH-tRNA, mRNAEscherichia coliBacteriaRF00005Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesElectron microscopy2.1762023-05-31
2718EMM|1|ZTransfer RNAMet-NH-tRNA, mRNAEscherichia coliBacteriaRF00005Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesElectron microscopy2.1762023-05-31
2726XZ7|1|fTransfer RNADeacylated tRNAi(Met)Escherichia coliBacteriaRF00005E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.1762020-07-22
2738G6Y|1|ZTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheElectron microscopy2.09752023-04-05
2748BIM|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteElectron microscopy2.04772023-08-16
2758BGE|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.11772023-08-16
2768CGN|1|BbTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Non-rotated 80S S. cerevisiae ribosome with ligandsElectron microscopy2.28772023-09-20
2778CGN|1|CcTransfer RNATransfer RNA fMetEscherichia coliBacteriaRF00005Non-rotated 80S S. cerevisiae ribosome with ligandsElectron microscopy2.28772023-09-20
2788EIU|1|YTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005E. coli 70S ribosome with A-loop mutations U2554C and U2555CElectron microscopy2.24742023-02-01
2798EIU|1|ZTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005E. coli 70S ribosome with A-loop mutations U2554C and U2555CElectron microscopy2.24742023-02-01
2808BF7|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.33772023-08-16
2818BHL|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.21772023-08-16
2827TOP|1|APTNTransfer RNAtRNAfMetEscherichia coliBacteriaRF00005Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.4772022-05-25
2838P2F|1|DTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateElectron microscopy2.44772024-05-01
2847Y7G|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)Electron microscopy2.34772023-10-25
2858P2F|1|FTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateElectron microscopy2.44762024-05-01
2868G6X|1|ZTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.31752023-03-22
2878CIV|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.47772023-09-20
2889FBV|1|ZTransfer RNAfMet-tRNAEscherichia coli BW25113BacteriaRF0000570S Escherichia coli ribosome with P-site initiatior tRNA.Electron microscopy2.4732024-06-26
2898P2H|1|DTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric stateElectron microscopy2.49772024-05-01
2907Y7E|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.41772023-10-25
2918BHP|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.37772023-08-16
2928IFB|1|6Transfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dibekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.43772024-02-14
2937Y7F|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)Electron microscopy2.43772023-10-25
2947SA4|1|5Transfer RNAmRNA, P-tRNA, E-tRNAEscherichia coliBacteriaRF00005Damaged 70S ribosome with PrfH boundElectron microscopy2.55772022-08-03
2957SA4|1|6Transfer RNAP-tRNA, E-tRNAEscherichia coliBacteriaRF00005Damaged 70S ribosome with PrfH boundElectron microscopy2.55772022-08-03
2968CG8|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.57772023-09-20
2977Y7H|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)Electron microscopy2.51772023-10-25
2987Y7C|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)Electron microscopy2.51772023-10-25
2996XZB|1|f2Transfer RNADeacylated tRNAi(Met)Escherichia coli K-12BacteriaRF00005E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.54762020-11-04
3008BH4|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.62772023-08-16
3017UG7|1|DtTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BElectron microscopy2.58772022-05-18
3027Y7D|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)Electron microscopy2.58772023-10-25
3037TOO|1|APTNTransfer RNAtRNAfMetEscherichia coliBacteriaRF00005Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.7772022-05-25
3047UNW|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)Electron microscopy2.6762022-06-22
3057MT7|1|yTransfer RNAmRNA, tRNA (Met)Escherichia coliBacteriaRF00005Mtb 70S with P and E site tRNAsElectron microscopy2.71772022-02-02
3067MT7|1|xTransfer RNAtRNA (Met)Escherichia coliBacteriaRF00005Mtb 70S with P and E site tRNAsElectron microscopy2.71772022-02-02
3078CF5|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.71772023-09-20
3088CDL|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF0000580S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complexElectron microscopy2.72772023-09-20
3098G5Z|1|PtTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)Electron microscopy2.64772023-04-19
3107MT2|1|yTransfer RNAinitiator tRNA (Met), mRNAEscherichia coliBacteriaRF00005Mtb 70S initiation complexElectron microscopy2.76772022-02-02
3116XZA|1|f2Transfer RNADeacylated tRNAi(Met)Escherichia coli K-12BacteriaRF00005E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.66762020-11-04
3128P16|1|5Transfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E167K RF2 on E. coli 70S release complex with UGG (Structure I)Electron microscopy2.77762024-05-22
3138P18|1|5Transfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E167K RF2 on E. coli 70S release complex with UGG (Structure III)Electron microscopy2.77762024-05-22
3149BDL|1|ETRNTransfer RNAtRNAfMetEscherichia coli K-12BacteriaRF0000580S ribosome with angiogeninElectron microscopy2.8772024-07-24
3157MT3|1|yTransfer RNAmRNA, tRNA (Met)Escherichia coliBacteriaRF00005Mtb 70S with P/E tRNAElectron microscopy2.8772022-02-02
3169BDL|1|PTRNTransfer RNAtRNAfMetEscherichia coli K-12BacteriaRF0000580S ribosome with angiogeninElectron microscopy2.8772024-07-24
3178P17|1|5Transfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E167K RF2 on E. coli 70S release complex with UGG (Structure II)Electron microscopy2.78762024-05-22
3188CVM|1|CTransfer RNAInitiator fMet RNAEscherichia coliBacteriaRF00005Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined mapElectron microscopy2.66762023-03-15
3197UNV|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)Electron microscopy2.7762022-06-22
3208EKC|1|xTransfer RNAM-F-Stop mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAElectron microscopy2.7762022-12-07
3217NWT|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)Electron microscopy2.66762021-12-15
3226AZ1|1|3Transfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinElectron microscopy2.7772017-12-06
3238BHJ|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.81772023-08-16
3248BGH|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.88772023-08-16
3258CRX|1|CTransfer RNA32MF mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline boundElectron microscopy2.78762023-03-22
3267TOR|1|ETRNTransfer RNAtRNAfMet bound to E-siteEscherichia coli K-12BacteriaRF00005Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.9772022-05-25
3277ST2|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)Electron microscopy2.9772022-02-23
3288G7R|1|xTransfer RNAM-I mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)Electron microscopy2.8762024-03-06
3298AM9|1|YTransfer RNAInitiator tRNA, mRNAEscherichia coli BW25113BacteriaRF00005Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosomeElectron microscopy2.8762023-03-08
3306Y69|1|wTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.86742020-07-01
3317M5D|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)Electron microscopy2.8762022-10-19
3327TOR|1|PTRNTransfer RNAmRNA, tRNAfMet bound to E-siteEscherichia coli K-12BacteriaRF00005Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.9742022-05-25
3335AFI|1|vTransfer RNAmRNA, P-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.9772015-03-11
3345AFI|1|wTransfer RNAP-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.9772015-03-11
3356WDE|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy3772020-07-01
3367ST6|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy3772022-02-23
3376H4N|1|wTransfer RNAtRNAEscherichia coliBacteriaRF00005Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy3772018-09-05
3386WD0|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy3772020-07-01
3396WDE|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy3772020-07-01
3406WD0|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy3772020-07-01
3417ST6|1|7Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy3772022-02-23
3427UNU|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)Electron microscopy2.9762022-06-22
3438G7P|1|xTransfer RNAM-I mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)Electron microscopy2.9762024-03-06
3448SYL|1|xTransfer RNAM-F-Stop mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsElectron microscopy2.9762023-08-09
3457UNR|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)Electron microscopy2.9762022-06-22
3468IFC|1|6Transfer RNAmRNA, P-site tRNAf-MetEscherichia coliBacteriaRF00005Arbekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.9772024-02-14
3478B7Y|1|nTransfer RNAmessenger RNA, P-tRNA fMetEscherichia coli K-12BacteriaRF00005Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.Electron microscopy3762023-01-25
3485H5U|1|5Transfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.01762017-01-25
3498G61|1|PtTransfer RNAmRNA, RNA (77-MER)Escherichia coliBacteriaRF00005mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)Electron microscopy2.94772023-04-19
3505J3C|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.04772016-10-12
3515WFS|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy3772018-05-02
3525WDT|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy3772018-04-25
3535WDT|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy3772018-04-25
3545WFS|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy3772018-05-02
3556OPE|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-ray diffraction3.1772020-06-24
3566OPE|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-ray diffraction3.1772020-06-24
3577TOQ|1|PTRNTransfer RNARNA (5'-R(*CP*AP*CP*AP*UP*GP*UP*UP*CP*C)-3'), tRNAfMetEscherichia coli K-12BacteriaRF00005Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PRElectron microscopy3.1772022-05-25
3589BDN|1|PTRNTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000580S ribosome with angiogenin and tRNAAlaElectron microscopy3.1772024-07-24
3599BDN|1|ETRNTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000580S ribosome with angiogenin and tRNAAlaElectron microscopy3.1772024-07-24
3606ORE|1|5Transfer RNAP-tRNA, RNA (5'-R(P*UP*UP*CP*UP*UP*CP*UP*AP*A)-3')Escherichia coliBacteriaRF00005Release complex 70SElectron microscopy2.9762019-06-19
3618CKU|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarinElectron microscopy3.11772023-09-20
3625J3C|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.04772016-10-12
3636OTR|1|XVTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.12772019-08-21
3646OTR|1|QVTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.12772019-08-21
3656OTR|1|QWTransfer RNAtRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.12772019-08-21
3666X7K|1|ATransfer RNAE-site and P-site tRNA (fMet)Escherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.1762020-09-02
3678URY|1|ATransfer RNAE-site and P-site fMet-tRNAEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosomeElectron microscopy3.1762024-06-12
3688URY|1|BTransfer RNAE-site and P-site fMet-tRNA, mRNA with 30 nt long spacerEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosomeElectron microscopy3.1762024-06-12
3696X7K|1|BTransfer RNAE-site and P-site tRNA (fMet), mRNA with 24 nt long spacerEscherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.1762020-09-02
3706ORD|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-ray diffraction3.1772020-06-24
3715MDV|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.97762016-12-14
3726OTR|1|XWTransfer RNAtRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.12772019-08-21
3736ORD|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-ray diffraction3.1772020-06-24
3746BZ6|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-ray diffraction3.18772018-11-14
3756ZTP|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy3722020-09-16
3766ZU1|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy3722020-09-16
3776ZTO|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy3722020-09-23
3785WE4|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.1772018-04-25
3797PJV|1|vTransfer RNAmRNA, P-site tRNA(fMet)Escherichia coli K-12BacteriaRF00005Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)Electron microscopy3.1772021-10-20
3807PJY|1|vTransfer RNAmRNA, P-site tRNA(fMet)Escherichia coli K-12BacteriaRF00005Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)Electron microscopy3.1772021-10-20
3815WE4|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.1772018-04-25
3827NBU|1|VTransfer RNAcspA mRNA, P-site fMet-tRNA(fMet)Escherichia coli K-12BacteriaRF00005Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.Electron microscopy3.11772022-03-02
3835U9G|1|WTransfer RNAfMet-tRNA (P- and E-site), truncated mRNAEscherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.2772017-03-22
3847K53|1|5Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.2772021-07-28
3856WNW|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAElectron microscopy3.2772020-06-24
3865UYM|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.2772017-06-07
3875U9F|1|WTransfer RNAfMet-tRNA (P- and E-site), truncated mRNAEscherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.2772017-03-22
3887ST7|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)Electron microscopy3.2772022-02-23
3897K54|1|6Transfer RNAtRNAfMetEscherichia coli K-12BacteriaRF00005Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)Electron microscopy3.2772021-07-28
3906WDD|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.2772020-07-01
3915UQ8|1|yTransfer RNAP-site tRNA fMetEscherichia coliBacteriaRF0000570S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)Electron microscopy3.2772018-03-07
3925U9G|1|XTransfer RNAfMet-tRNA (P- and E-site)Escherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.2772017-03-22
3935U9F|1|XTransfer RNAfMet-tRNA (P- and E-site)Escherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.2772017-03-22
3945UYM|1|XTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.2772017-06-07
3957LV0|1|6Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)Electron microscopy3.2772021-07-28
3967SSN|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)Electron microscopy3.2772022-02-23
3977K53|1|6Transfer RNAtRNAfMetEscherichia coli K-12BacteriaRF00005Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.2772021-07-28
3987SSO|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)Electron microscopy3.2772022-02-23
3998G7Q|1|xTransfer RNAM-M mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)Electron microscopy3.1762024-03-06
4005MDW|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.06762016-12-14
4016BZ6|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-ray diffraction3.18772018-11-14
4028UQL|1|ATransfer RNAE-site and P-site fMet-tRNAEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeElectron microscopy3.2762024-05-29
4036X6T|1|ATransfer RNAE-site and P-site tRNA (fMet)Escherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.2762020-09-02
4048UQL|1|BTransfer RNAE-site and P-site fMet-tRNA, mRNA with 24 nt long spacerEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeElectron microscopy3.2762024-05-29
4056X6T|1|BTransfer RNAE-site and P-site tRNA (fMet), mRNA with 24 nt long spacerEscherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.2762020-09-02
4066OJ2|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-ray diffraction3.2772020-06-24
4076OF6|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-ray diffraction3.2772020-06-24
4086WDD|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.2772020-07-01
4096C4I|1|yTransfer RNAE-site or P-site tRNA fMetEscherichia coliBacteriaRF00005Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.24772018-02-21
4106C4I|1|xTransfer RNAE-site or P-site tRNA fMet, mRNAEscherichia coliBacteriaRF00005Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.24772018-02-21
4116OXA|1|XVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.25772019-08-21
4126OXA|1|QWTransfer RNAP-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.25772019-08-21
4138BHN|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.85772023-08-16
4145J30|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.2772016-10-12
4155J30|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.2772016-10-12
4166OF6|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-ray diffraction3.2772020-06-24
4176OJ2|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-ray diffraction3.2772020-06-24
4185MDZ|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of the 70S ribosome (empty A site)Electron microscopy3.1762016-12-14
4197JT1|1|5Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF0000570S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)Electron microscopy3.3772020-11-11
4207K55|1|6Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)Electron microscopy3.3772021-07-28
4217SSD|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Mid translocation intermediate with EF-G bound with GDP (Structure IV)Electron microscopy3.3772022-02-23
4228AP4|1|ZTransfer RNAP-tRNAEscherichia coli K-12BacteriaRF00005Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNAElectron microscopy3712022-11-16
4236OXA|1|QVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.25772019-08-21
4246WD1|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.3772020-07-01
4256YEF|1|xTransfer RNAE-site tRNA, mRNAEscherichia coli DH5[alpha]BacteriaRF0000570S initiation complex with assigned rRNA modifications from Staphylococcus aureusElectron microscopy3.2772021-01-27
4266OFX|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Non-rotated ribosome (Structure I)Electron microscopy3.3772019-09-25
4276WDG|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.3772020-07-01
4286OXA|1|XWTransfer RNAP-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.25772019-08-21
4297K50|1|5Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.4772021-07-28
4307K52|1|6Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)Electron microscopy3.4772021-07-28
4315ZEB|1|vTransfer RNAP-tRNAfMetEscherichia coliBacteriaRF00005M. Smegmatis P/P state 70S ribosome structureElectron microscopy3.4772018-09-26
4327K50|1|6Transfer RNAtRNAfMetEscherichia coli K-12BacteriaRF00005Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.4772021-07-28
4335ZEP|1|wTransfer RNAE-tRNAfMetEscherichia coliBacteriaRF00005M. smegmatis hibernating state 70S ribosome structureElectron microscopy3.4772018-09-26
4346WDF|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.3772020-07-01
4356OG7|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.3752019-09-25
4368A3L|1|WTransfer RNAE-site tRNAEscherichia coli K-12BacteriaRF00005Structural insights into the binding of bS1 to the ribosomeElectron microscopy3.42772023-05-10
4378UR0|1|ATransfer RNAE-site and P-site fMet-tRNAEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeElectron microscopy3.4762024-05-29
4388UR0|1|BTransfer RNAE-site and P-site fMet-tRNA, mRNA with 24 nt long spacerEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeElectron microscopy3.4762024-05-29
4396OGI|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.4742019-09-25
4405LZD|1|vTransfer RNAfMet-tRNAfMetEscherichia coliBacteriaRF00005Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.4772016-11-23
4415WE6|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.4772018-04-25
4425WFK|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.4772018-05-02
4435WFK|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.4772018-05-02
4445WE6|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.4772018-04-25
4455MDY|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.35762016-12-21
4466BU8|1|XTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000570S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.5772018-01-31
4477JT2|1|5Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF0000570S ribosome stalled on long mRNA with ArfB bound in the A siteElectron microscopy3.5772020-11-11
4486BU8|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.5772018-01-31
4495U4I|1|yTransfer RNAP-site or E-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.5772017-01-11
4505UQ7|1|yTransfer RNAP-site tRNA fMetEscherichia coliBacteriaRF0000570S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)Electron microscopy3.5772018-03-07
4517K51|1|6Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)Electron microscopy3.5772021-07-28
4525U4I|1|xTransfer RNAmRNA, P-site or E-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.5772017-01-11
4538A3L|1|VTransfer RNAP-site fMet-tRNA(fMet)Escherichia coli K-12BacteriaRF00005Structural insights into the binding of bS1 to the ribosomeElectron microscopy3.42772023-05-10
4546X7F|1|ATransfer RNAE-site and P-site tRNA (fMet)Escherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.5762020-09-02
4556X7F|1|BTransfer RNAE-site and P-site tRNA (fMet), mRNA with 24 nt long spacerEscherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.5762020-09-02
4566OXI|1|XVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-ray diffraction3.49772019-08-21
4576OXI|1|QVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-ray diffraction3.49772019-08-21
4586BUW|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-ray diffraction3.5772018-11-14
4596ZTJ|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.4722020-09-16
4606ZTM|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.3722020-09-16
4616BUW|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-ray diffraction3.5772018-11-14
4626OSQ|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.5762019-06-26
4638R6C|1|5Transfer RNAN-Formylmethionine tRNAEscherichia coli BW25113BacteriaRF0000570S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.Electron microscopy2.222024-07-24
4646SWC|1|4Transfer RNAinitiator Met-tRNA fMet from E. coli (A1U72 variant), mRNAEscherichia coliBacteriaRF00005IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiElectron microscopy3.3762020-02-19
4656ORL|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.5762019-06-19
4665IQR|1|5Transfer RNAmRNA, P-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structure of RelA bound to the 70S ribosomeElectron microscopy3772016-05-04
4676ZTL|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.5722020-09-16

Release history

Release3.3453.346
Date2024-07-252024-07-31

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
19BDN|1|ETRN80S ribosome with angiogenin and tRNAAlaELECTRON MICROSCOPY3.177
29BDL|1|ETRN80S ribosome with angiogeninELECTRON MICROSCOPY2.877
39BDL|1|PTRN80S ribosome with angiogeninELECTRON MICROSCOPY2.877
48R6C|1|570S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.ELECTRON MICROSCOPY2.22
59BDN|1|PTRN80S ribosome with angiogenin and tRNAAlaELECTRON MICROSCOPY3.177
66AZ1|1|3Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinELECTRON MICROSCOPY2.777
76OSQ|1|5RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.576
87M5D|1|5Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)ELECTRON MICROSCOPY2.876
96ORE|1|5Release complex 70SELECTRON MICROSCOPY2.976
106ORL|1|5RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.576
117LH5|1|AVCrystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-RAY DIFFRACTION3.2776
128B0X|1|ZTranslating 70S ribosome in the unrotated state (P and E, tRNAs)ELECTRON MICROSCOPY1.5575
138IFC|1|6Arbekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.977
148IFB|1|6Dibekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.4377
158BHL|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.2177
168BGE|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.1177
178BHP|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.3777
188BIL|1|4Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.ELECTRON MICROSCOPY2.0477
198BIM|1|4Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteELECTRON MICROSCOPY2.0477
208BGH|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.8877
218BHN|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.8577
228BF7|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.3377
238BH4|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.6277
248BHJ|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.8177
258AM9|1|YCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosomeELECTRON MICROSCOPY2.876
268B7Y|1|nCryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.ELECTRON MICROSCOPY376
278G6W|1|ZStructure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.0275
288G6X|1|ZStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.3175
298G6Y|1|ZStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheELECTRON MICROSCOPY2.0975
308CRX|1|CCutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline boundELECTRON MICROSCOPY2.7876
318CVM|1|CCutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined mapELECTRON MICROSCOPY2.6676
325U9F|1|W3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.277
336OG7|1|570S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.375
346BOH|1|IAAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.477
356BOH|1|NCAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.477
366B4V|1|IAAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.477
376B4V|1|MCAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.477
387NWT|1|5Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)ELECTRON MICROSCOPY2.6676
396C4I|1|xConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.2477
405MDY|1|5Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.3576
415MDW|1|5Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.0676
425MDV|1|5Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.9776
435MDZ|1|5Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.176
445IQR|1|5Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY377
457SA4|1|5Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.5577
466ZTM|1|AWE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.372
476ZU1|1|AWE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY372
486ZTO|1|AWE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY372
496ZTP|1|AWE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY372
506ZTL|1|AWE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.572
518P2F|1|FStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateELECTRON MICROSCOPY2.4476
524V5K|1|AVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
534V5C|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.377
548EKC|1|xEscherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAELECTRON MICROSCOPY2.776
558G7Q|1|xStructure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)ELECTRON MICROSCOPY3.176
568G7P|1|xStructure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)ELECTRON MICROSCOPY2.976
578G7R|1|xStructure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)ELECTRON MICROSCOPY2.876
587UNR|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)ELECTRON MICROSCOPY2.976
597UNU|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)ELECTRON MICROSCOPY2.976
607NBU|1|VStructure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.ELECTRON MICROSCOPY3.1177
618A3L|1|VStructural insights into the binding of bS1 to the ribosomeELECTRON MICROSCOPY3.4277
629FBV|1|Z70S Escherichia coli ribosome with P-site initiatior tRNA.ELECTRON MICROSCOPY2.473
637ST6|1|6Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY377
647K00|1|ZStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.9876
658AYE|1|ZE. coli 70S ribosome bound to thermorubin and fMet-tRNAELECTRON MICROSCOPY1.9676
668P17|1|5E167K RF2 on E. coli 70S release complex with UGG (Structure II)ELECTRON MICROSCOPY2.7876
678P16|1|5E167K RF2 on E. coli 70S release complex with UGG (Structure I)ELECTRON MICROSCOPY2.7776
688P18|1|5E167K RF2 on E. coli 70S release complex with UGG (Structure III)ELECTRON MICROSCOPY2.7776
698FTO|1|ZE. coli 70S ribosome with an improved MS2 tag inserted in H98ELECTRON MICROSCOPY1.8576
708EMM|1|ZComposite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesELECTRON MICROSCOPY2.176
718EIU|1|ZE. coli 70S ribosome with A-loop mutations U2554C and U2555CELECTRON MICROSCOPY2.2474
727Y7G|1|ZStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)ELECTRON MICROSCOPY2.3477
737Y7H|1|ZStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)ELECTRON MICROSCOPY2.5177
747Y7E|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.4177
757Y7C|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)ELECTRON MICROSCOPY2.5177
767Y7F|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)ELECTRON MICROSCOPY2.4377
777Y7D|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)ELECTRON MICROSCOPY2.5877
788SYL|1|xCryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsELECTRON MICROSCOPY2.976
796WNW|1|5Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAELECTRON MICROSCOPY3.277
806ND6|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8576
816O97|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-RAY DIFFRACTION2.7576
826CAE|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
836OF1|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-RAY DIFFRACTION2.876
845WIS|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
855W4K|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
864Y4P|1|1xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.576
875J4B|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
885J4C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.876
894W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.476
905WIT|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
916XQD|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-RAY DIFFRACTION2.876
926XQD|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-RAY DIFFRACTION2.876
937RQ9|1|1xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.676
946ND5|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.676
957RQ8|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.576
964W2H|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.776
976XQE|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION376
986XQE|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION376
997RQ8|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.576
1007RQ9|1|2xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.676
1017U2J|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5577
1027U2J|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5577
1037U2I|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5577
1047U2H|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-RAY DIFFRACTION2.5577
1057U2H|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-RAY DIFFRACTION2.5577
1067U2I|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5577
1078CVK|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.577
1088CVJ|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.477
1096XHW|1|1xCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.576
1108CVL|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.377
1116XHY|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.676
1126XHY|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.676
1136XHW|1|2xCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.576
1148CVJ|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.477
1158CVK|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.577
1168CVL|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.377
1178G2A|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4577
1188G2C|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6577
1198G29|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5577
1208G29|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5577
1218G2A|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4577
1228G2C|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6577
1236XHV|1|2xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.476
1246XHV|1|1xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.476
1258EV7|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8976
1268EV6|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94676
1278EKB|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-RAY DIFFRACTION2.776
1288UD6|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.776
1298UD7|1|1xCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.5576
1308G2B|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5576
1318UD8|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.676
1328UD6|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.776
1338UD7|1|2xCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.5576
1348G2B|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5576
1358UD8|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.676
1368EKB|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-RAY DIFFRACTION2.776
1378G2D|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.776
1388G2D|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.776
1394V8B|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1404V87|1|CCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1414V8C|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1424V8C|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1434V87|1|BCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1444V8B|1|ACCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1454V6G|1|CCInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1466QNQ|1|2K70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.577
1476OXI|1|XVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-RAY DIFFRACTION3.4977
1486OTR|1|XVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
1496OXA|1|XVDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
1506OTR|1|QVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
1516OXA|1|QVDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
1526OXI|1|QVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-RAY DIFFRACTION3.4977
1537JQM|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolutionX-RAY DIFFRACTION3.0576
1545VP2|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.876
1556UO1|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9576
1567JQL|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION376
1575F8K|1|1xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
1584ZER|1|1xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.176
1594ZER|1|2xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.176
1605F8K|1|2xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
1615J4D|1|IAE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.177
1625J4D|1|NCE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.177
1635EL4|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1577
1645IB7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9977
1655IB8|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-RAY DIFFRACTION3.1377
1666GSK|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-RAY DIFFRACTION3.3677
1676GSJ|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.9677
1685IBB|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9677
1694WQ1|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.177
1704WQR|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1577
1714WT1|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0577
1724WRO|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0577
1734WRA|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0577
1744WSD|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9577
1754WR6|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0577
1764WZO|1|2KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.377
1774V8D|1|CCStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
1784V8D|1|ACStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
1794V8F|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
1804V8E|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
1814V8E|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
1824V8F|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
1834WRA|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0577
1844WQ1|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.177
1854WR6|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0577
1864WQR|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1577
1874WT1|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0577
1884WRO|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0577
1894WSD|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9577
1905EL7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1577
1915EL6|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.177
1926GSL|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-RAY DIFFRACTION3.1677
1935E7K|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.277
1945EL5|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1577
1954WZO|1|2LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.377
1965EL4|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1576
1975EL5|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1577
1986GSL|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-RAY DIFFRACTION3.1677
1995EL7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1577
2005IBB|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9676
2015IB7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9977
2025IB8|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-RAY DIFFRACTION3.1377
2036GSK|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-RAY DIFFRACTION3.3677
2046GSJ|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.9677
2055E7K|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.277
2065EL6|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.177
2071VY6|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.976
2081VY7|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.876
2094W2G|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5576
2106XZB|1|f2E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.5476
2111VY5|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5576
2121VY4|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.676
2134WPO|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.876
2144WQY|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.876
2154V9R|1|AXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
2164V9S|1|AXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
2174W2I|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.776
2184Z3S|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6576
2195DOY|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.676
2205HAU|1|2wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION376
2215HAU|1|1wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION376
2224Z8C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.976
2235HCQ|1|1xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
2245HCP|1|1xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8976
2255HCR|1|1xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
2265HD1|1|1xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.776
2275HD1|1|2xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.776
2285HCR|1|2xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
2295HCP|1|2xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8976
2304Z8C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.976
2315HCQ|1|2xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
2326XZA|1|f2E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.6676
2336XZ7|1|fE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.176
2346ZTJ|1|AWE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.472
2355LZD|1|vStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.477
2365AFI|1|v2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.977
2375ZEB|1|vM. Smegmatis P/P state 70S ribosome structureELECTRON MICROSCOPY3.477
2385WE4|1|v70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.177
2395WE6|1|v70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.477
2405WFK|1|v70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.477
2415WDT|1|v70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY377
2425WFS|1|v70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY377
2434V5K|1|CVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
2445H5U|1|5Mechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.0176
2457MT7|1|yMtb 70S with P and E site tRNAsELECTRON MICROSCOPY2.7177
2467MT2|1|yMtb 70S initiation complexELECTRON MICROSCOPY2.7677
2474V9I|1|AVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
2484V51|1|CVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.877
2494V51|1|AVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.877
2504V9I|1|CVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
2514V7L|1|CXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
2524V7L|1|AXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
2534V5C|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.377
2544V7M|1|CXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
2554V7M|1|AXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
2564V6A|1|AWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
2574V6A|1|CWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
2586UO1|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9576
2595DOY|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.676
2607JQM|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolutionX-RAY DIFFRACTION3.0576
2617JQL|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION376
2625VP2|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.876
2634Z3S|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6576
2646ND5|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.676
2656ND6|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8576
2666CAE|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
2676O97|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-RAY DIFFRACTION2.7576
2685J4B|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
2695J4C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.876
2705W4K|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
2715WIS|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
2724Y4P|1|2xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.576
2738EV7|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8976
2748EV6|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94676
2754V9R|1|CXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
2764V9S|1|CXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
2774W2H|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.776
2784W2I|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.776
2794W2G|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5576
2804W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.476
2811VY6|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.976
2821VY5|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5576
2831VY4|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.676
2844WQY|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.876
2854WPO|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.876
2866OF1|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-RAY DIFFRACTION2.876
2875WIT|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
2884LNT|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
2894LT8|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
2904LNT|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
2914LT8|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
2921VVJ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
2934LSK|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
2944LSK|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
2951VVJ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
2965CZP|1|QV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.377
2975DFE|1|QV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.177
2985J3C|1|QVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.0477
2995J30|1|QVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.277
3004V8Q|1|BVComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
3014YPB|1|QVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
3024W4G|1|QVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
3034YZV|1|QVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
3044YZV|1|XVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
3054YPB|1|XVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
3064W4G|1|XVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
3074V67|1|AYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
3084V67|1|CYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
3096BUW|1|XVThermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-RAY DIFFRACTION3.577
3106BZ6|1|XVThermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-RAY DIFFRACTION3.1877
3116BZ6|1|QVThermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-RAY DIFFRACTION3.1877
3126BUW|1|QVThermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-RAY DIFFRACTION3.577
3136OF6|1|QVCrystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-RAY DIFFRACTION3.277
3146OF6|1|XVCrystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-RAY DIFFRACTION3.277
3154V63|1|CYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
3164V63|1|AYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
3176YEF|1|x70S initiation complex with assigned rRNA modifications from Staphylococcus aureusELECTRON MICROSCOPY3.277
3186QNQ|1|2L70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.577
3194V6G|1|ACInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
3205UQ8|1|y70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)ELECTRON MICROSCOPY3.277
3215UQ7|1|y70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)ELECTRON MICROSCOPY3.577
3225U4I|1|xStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.577
3236WD0|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY377
3246WDE|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY377
3255UYM|1|W70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.277
3266BU8|1|W70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.577
3275U9G|1|W3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.277
3287K53|1|5Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.277
3297K50|1|5Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.477
3306ORD|1|XVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-RAY DIFFRACTION3.177
3316ORD|1|QVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-RAY DIFFRACTION3.177
3326OJ2|1|XVCrystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-RAY DIFFRACTION3.277
3336OJ2|1|QVCrystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-RAY DIFFRACTION3.277
3346OPE|1|QVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-RAY DIFFRACTION3.177
3356OPE|1|XVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-RAY DIFFRACTION3.177
3367LH5|1|CVCrystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-RAY DIFFRACTION3.2777
3371VY7|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.876
3385J3C|1|XVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.0477
3395J30|1|XVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.277
3405DFE|1|XV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.177
3415CZP|1|XV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.377
3427JT2|1|570S ribosome stalled on long mRNA with ArfB bound in the A siteELECTRON MICROSCOPY3.577
3437JT1|1|570S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)ELECTRON MICROSCOPY3.377
3448G5Z|1|PtmRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)ELECTRON MICROSCOPY2.6477
3458G61|1|PtmRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)ELECTRON MICROSCOPY2.9477
3466OFX|1|5Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.377
3477TOR|1|PTRNMammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.974
3486WDD|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.277
3498AP4|1|ZStructure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNAELECTRON MICROSCOPY371
3508A3L|1|WStructural insights into the binding of bS1 to the ribosomeELECTRON MICROSCOPY3.4277
3518CGN|1|BbNon-rotated 80S S. cerevisiae ribosome with ligandsELECTRON MICROSCOPY2.2877
3528EIU|1|YE. coli 70S ribosome with A-loop mutations U2554C and U2555CELECTRON MICROSCOPY2.2474
3538EMM|1|YComposite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesELECTRON MICROSCOPY2.176
3544WZO|1|1KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.370
3556QNQ|1|1K70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.565
3564V6G|1|CBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.565
3576SWC|1|4IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiELECTRON MICROSCOPY3.376
3586QNQ|1|3L70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.577
3594V6G|1|ADInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
3606X7F|1|ACryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.576
3616X7K|1|ACryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.176
3626X6T|1|ACryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.276
3638UR0|1|BEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.476
3648URY|1|BEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.176
3658UQL|1|BEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.276
3668UR0|1|AEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.476
3678URY|1|AEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.176
3688UQL|1|AEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.276
3696X7K|1|BCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.176
3706X7F|1|BCryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.576
3716X6T|1|BCryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.276
3724V5K|1|CWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
3734V5K|1|AWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
3746BOH|1|DAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.477
3756BOH|1|IBAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.477
3766B4V|1|HBAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.477
3776B4V|1|DAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.477
3785J4D|1|IBE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.177
3795J4D|1|DE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.177
3804V8Q|1|BWComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
3814V63|1|CZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
3824V63|1|AZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
3834V67|1|CZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
3844V67|1|AZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
3854V87|1|CDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
3864V8B|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
3874V8C|1|DDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
3884V8C|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
3894V8B|1|ADCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
3904V87|1|BDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
3916QNQ|1|3K70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.577
3924V6G|1|CDInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
3934W4G|1|XWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
3944YPB|1|XWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
3956OXA|1|XWDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
3966OTR|1|XWDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
3974W4G|1|QWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
3984YPB|1|QWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
3996OXA|1|QWDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
4006OTR|1|QWDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
4017MT7|1|xMtb 70S with P and E site tRNAsELECTRON MICROSCOPY2.7177
4024V5A|1|CWStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.577
4034V5A|1|AWStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.577
4046C4I|1|yConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.2477
4055U4I|1|yStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.577
4067SA4|1|6Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.5577
4076Y69|1|wCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.8674
4086H4N|1|wStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY377
4096WDE|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY377
4106WDD|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.277
4117TOR|1|ETRNMammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.977
4127TOO|1|APTNYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.777
4137TOP|1|APTNYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.477
4146OGI|1|570S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.474
4156WD1|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.377
4166WDF|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.377
4176WDG|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.377
4187ST7|1|6Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)ELECTRON MICROSCOPY3.277
4197SSN|1|6Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)ELECTRON MICROSCOPY3.277
4207SSO|1|6Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)ELECTRON MICROSCOPY3.277
4217MT3|1|yMtb 70S with P/E tRNAELECTRON MICROSCOPY2.877
4227TOQ|1|PTRNMammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PRELECTRON MICROSCOPY3.177
4237OSA|1|PSITPre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION377
4247PJV|1|vStructure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)ELECTRON MICROSCOPY3.177
4257LV0|1|6Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)ELECTRON MICROSCOPY3.277
4267PJY|1|vStructure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)ELECTRON MICROSCOPY3.177
4278P2G|1|DStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric stateELECTRON MICROSCOPY2.0277
4288P2H|1|DStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric stateELECTRON MICROSCOPY2.4977
4298P2F|1|DStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateELECTRON MICROSCOPY2.4477
4307SSD|1|6Mid translocation intermediate with EF-G bound with GDP (Structure IV)ELECTRON MICROSCOPY3.377
4317UG7|1|Dt70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BELECTRON MICROSCOPY2.5877
4327ST2|1|6Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)ELECTRON MICROSCOPY2.977
4337K51|1|6Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)ELECTRON MICROSCOPY3.577
4347K54|1|6Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)ELECTRON MICROSCOPY3.277
4357ST6|1|7Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY377
4367K50|1|6Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.477
4377K53|1|6Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.277
4388CDL|1|Cc80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complexELECTRON MICROSCOPY2.7277
4398CCS|1|Cc80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complexELECTRON MICROSCOPY1.9777
4408CF5|1|CcTranslocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.7177
4418CKU|1|CcTranslocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarinELECTRON MICROSCOPY3.1177
4427OSM|1|PSITIntermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION377
4438CG8|1|CcTranslocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.5777
4448CDR|1|CcTranslocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.0477
4458CEH|1|CcTranslocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.0577
4468CIV|1|CcTranslocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.4777
4478CGN|1|CcNon-rotated 80S S. cerevisiae ribosome with ligandsELECTRON MICROSCOPY2.2877
4487K55|1|6Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)ELECTRON MICROSCOPY3.377
4497K52|1|6Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)ELECTRON MICROSCOPY3.477
4506WD0|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY377
4516BU8|1|X70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.577
4525UYM|1|X70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.277
4535ZEP|1|wM. smegmatis hibernating state 70S ribosome structureELECTRON MICROSCOPY3.477
4545AFI|1|w2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.977
4555WFK|1|w70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.477
4565WE6|1|w70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.477
4575WFS|1|w70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY377
4585WDT|1|w70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY377
4595WE4|1|w70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.177
4605U9F|1|X3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.277
4615U9G|1|X3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.277
4625L4O|1|AStructure of an E.coli initiator tRNAfMet A1-U72 variantX-RAY DIFFRACTION2.876
4633CW5|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.177
4643CW6|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.377
4657UNV|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)ELECTRON MICROSCOPY2.776
4667UNW|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)ELECTRON MICROSCOPY2.676
4673QSY|1|DRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.277

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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