NR_3.5_42622.3

Members (135)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4V8C\|1\|AB (rep)	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
2	4V8E\|1\|CB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-ray diffraction	3.3	2014-07-09
3	4WQF\|1\|AB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	2015-01-28
4	4WQY\|1\|AB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
5	4V9R\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
6	4W2G\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
7	4V9S\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-ray diffraction	3.1	2014-07-09
8	1VY4\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
9	4LT8\|1\|YB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2014-08-06
10	4V87\|1\|AB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
11	4V6F\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-ray diffraction	3.1	2014-07-09
12	4WPO\|1\|AB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
13	1VY7\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
14	1VY6\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
15	4V8H\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of HPF bound to the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
16	4W2H\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
17	4L47\|1\|YB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-ray diffraction	3.22	2014-08-06
18	4V5P\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	2014-07-09
19	4V5P\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	2014-07-09
20	4V8E\|1\|AB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-ray diffraction	3.3	2014-07-09
21	4V8D\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
22	4V8C\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
23	4V8B\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
24	4V8D\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
25	4WQU\|1\|AB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	2015-01-28
26	4W2E\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	2014-10-01
27	4W2I\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
28	4W2F\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
29	4V95\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of YAEJ bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
30	1VY5\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
31	4WQY\|1\|CB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
32	4WPO\|1\|CB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
33	4V9R\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
34	4L47\|1\|RB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-ray diffraction	3.22	2014-08-06
35	4LT8\|1\|RB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2014-08-06
36	4LNT\|1\|RB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
37	4LNT\|1\|YB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
38	4V9I\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	2014-07-09
39	4V5C\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	2014-07-09
40	4WT8\|1\|Cs	5S ribosomal RNA	5S rRNA (119-MER)	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex	X-ray diffraction	3.4	2015-01-21
41	4V5C\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	2014-07-09
42	4V8F\|1\|AB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
43	4V87\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
44	4W2H\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
45	4WQU\|1\|CB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	2015-01-28
46	4WQF\|1\|CB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	2015-01-28
47	4V6G\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
48	4V8H\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of HPF bound to the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
49	4V9S\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-ray diffraction	3.1	2014-07-09
50	4V9Q\|1\|AB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.	X-ray diffraction	3.4	2014-07-09
51	4V5E\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Insights into translational termination from the structure of RF2 bound to the ribosome	X-ray diffraction	3.45	2014-07-09
52	4V9Q\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.	X-ray diffraction	3.4	2014-07-09
53	4V5E\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Insights into translational termination from the structure of RF2 bound to the ribosome	X-ray diffraction	3.45	2014-07-09
54	4V9I\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	2014-07-09
55	4WT8\|1\|Ds	5S ribosomal RNA	5S rRNA (119-MER)	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex	X-ray diffraction	3.4	2015-01-21
56	4V9A\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of the 70S ribosome with tetracycline.	X-ray diffraction	3.3	2014-07-09
57	4V8F\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
58	4V8B\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
59	4V8I\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of YfiA bound to the 70S ribosome.	X-ray diffraction	2.7	2014-07-09
60	1VY5\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
61	4W2G\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
62	4W2I\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
63	4LSK\|1\|YB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2014-08-06
64	4V67\|1\|BB	5S ribosomal RNA	5S RRNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
65	4V6A\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of EF-P bound to the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
66	4V83\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.	X-ray diffraction	3.5	2014-07-09
67	4V9K\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.	X-ray diffraction	3.5	2014-07-09
68	4V6A\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of EF-P bound to the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
69	4V83\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.	X-ray diffraction	3.5	2014-07-09
70	4V9L\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.	X-ray diffraction	3.5	2014-07-09
71	4V5D\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-ray diffraction	3.5	2014-07-09
72	4V67\|1\|DB	5S ribosomal RNA	5S RRNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
73	4V8G\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of RMF bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
74	4V8I\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of YfiA bound to the 70S ribosome.	X-ray diffraction	2.7	2014-07-09
75	1VVJ\|1\|RB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2014-08-06
76	4LSK\|1\|RB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2014-08-06
77	4V5D\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-ray diffraction	3.5	2014-07-09
78	4V5R\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
79	4V9N\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.	X-ray diffraction	3.4	2014-07-09
80	4V7X\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-ray diffraction	3	2014-07-09
81	4V5J\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-ray diffraction	3.1	2014-07-09
82	4V63\|1\|DB	5S ribosomal RNA	5S RRNA	Thermus thermophilus	Bacteria	RF00001	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
83	4V5J\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-ray diffraction	3.1	2014-07-09
84	4V5R\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
85	4V9N\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.	X-ray diffraction	3.4	2014-07-09
86	4V8A\|1\|AB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.	X-ray diffraction	3.2	2014-07-09
87	4V8A\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.	X-ray diffraction	3.2	2014-07-09
88	4V8G\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of RMF bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
89	4V95\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of YAEJ bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
90	4W2F\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
91	4V7L\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
92	4V5Q\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	2014-07-09
93	4V7M\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	The structures of Capreomycin bound to the 70S ribosome.	X-ray diffraction	3.45	2014-07-09
94	4V9L\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.	X-ray diffraction	3.5	2014-07-09
95	4V9H\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-ray diffraction	2.86	2014-07-09
96	4V63\|1\|BB	5S ribosomal RNA	5S RRNA	Thermus thermophilus	Bacteria	RF00001	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
97	4V7Y\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-ray diffraction	3	2014-07-09
98	4V7Y\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-ray diffraction	3	2014-07-09
99	4V7X\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-ray diffraction	3	2014-07-09
100	4V9K\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.	X-ray diffraction	3.5	2014-07-09
101	4V84\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.	X-ray diffraction	3.4	2014-07-09
102	4V9B\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of the 70S ribosome with tigecycline.	X-ray diffraction	3.1	2014-07-09
103	4V9A\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of the 70S ribosome with tetracycline.	X-ray diffraction	3.3	2014-07-09
104	4V9B\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of the 70S ribosome with tigecycline.	X-ray diffraction	3.1	2014-07-09
105	1VY4\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
106	1VVJ\|1\|YB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2014-08-06
107	4V7J\|1\|AB	5S ribosomal RNA	RNA (119-MER)	Thermus thermophilus	Bacteria	RF00001	Structure of RelE nuclease bound to the 70S ribosome (precleavage state)	X-ray diffraction	3.3	2014-07-09
108	4V51\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
109	4V90\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Thermus thermophilus Ribosome	X-ray diffraction	2.95	2014-07-09
110	4V84\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.	X-ray diffraction	3.4	2014-07-09
111	4V7W\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-ray diffraction	3	2014-07-09
112	4V7J\|1\|BB	5S ribosomal RNA	RNA (119-MER)	Thermus thermophilus	Bacteria	RF00001	Structure of RelE nuclease bound to the 70S ribosome (precleavage state)	X-ray diffraction	3.3	2014-07-09
113	4V51\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
114	4V5Q\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	2014-07-09
115	4V7W\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-ray diffraction	3	2014-07-09
116	4V6F\|1\|AB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-ray diffraction	3.1	2014-07-09
117	4V7L\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
118	4V8N\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.	X-ray diffraction	3.1	2014-07-09
119	4V8N\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.	X-ray diffraction	3.1	2014-07-09
120	1VY6\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
121	1VY7\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
122	4V8Q\|1\|AB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-ray diffraction	3.1	2014-07-09
123	4V5S\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
124	4V5S\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
125	4V5K\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
126	4V8X\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of Thermus thermophilus ribosome	X-ray diffraction	3.35	2014-07-09
127	4V5K\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
128	4V8X\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of Thermus thermophilus ribosome	X-ray diffraction	3.35	2014-07-09
129	4V5A\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet	X-ray diffraction	3.5	2014-07-09
130	4V6G\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
131	4V5A\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet	X-ray diffraction	3.5	2014-07-09
132	4V5L\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog	X-ray diffraction	3.1	2014-07-09
133	4V7Z\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.	X-ray diffraction	3.1	2014-07-09
134	4V7Z\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.	X-ray diffraction	3.1	2014-07-09
135	4V7M\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	The structures of Capreomycin bound to the 70S ribosome.	X-ray diffraction	3.45	2014-07-09

Release history

Release	2.8	2.9	2.10	2.11
Date	2015-01-30	2015-02-06	2015-02-13	2015-02-20

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.5_42622.3	NR_all_42622.2	2.8	(127) 1VVJ\|1\|RB, 1VVJ\|1\|YB, 1VY4\|1\|BB, 1VY4\|1\|DB, 1VY5\|1\|BB, 1VY5\|1\|DB, 1VY6\|1\|BB, 1VY6\|1\|DB, 1VY7\|1\|BB, 1VY7\|1\|DB, 4L47\|1\|RB, 4L47\|1\|YB, 4LNT\|1\|RB, 4LNT\|1\|YB, 4LSK\|1\|RB, 4LSK\|1\|YB, 4LT8\|1\|RB, 4LT8\|1\|YB, 4V51\|1\|BB, 4V51\|1\|DB, 4V5A\|1\|BB, 4V5A\|1\|DB, 4V5C\|1\|BB, 4V5C\|1\|DB, 4V5D\|1\|BB, 4V5D\|1\|DB, 4V5E\|1\|BB, 4V5E\|1\|DB, 4V5J\|1\|BB, 4V5J\|1\|DB, 4V5K\|1\|BB, 4V5K\|1\|DB, 4V5L\|1\|BB, 4V5P\|1\|BB, 4V5P\|1\|DB, 4V5Q\|1\|BB, 4V5Q\|1\|DB, 4V5R\|1\|BB, 4V5R\|1\|DB, 4V5S\|1\|BB, 4V5S\|1\|DB, 4V63\|1\|BB, 4V63\|1\|DB, 4V67\|1\|BB, 4V67\|1\|DB, 4V6A\|1\|BB, 4V6A\|1\|DB, 4V6F\|1\|AB, 4V6F\|1\|DB, 4V6G\|1\|BB, 4V6G\|1\|DB, 4V7J\|1\|AB, 4V7J\|1\|BB, 4V7L\|1\|BB, 4V7L\|1\|DB, 4V7M\|1\|BB, 4V7M\|1\|DB, 4V7W\|1\|BB, 4V7W\|1\|DB, 4V7X\|1\|BB, 4V7X\|1\|DB, 4V7Y\|1\|BB, 4V7Y\|1\|DB, 4V7Z\|1\|BB, 4V7Z\|1\|DB, 4V83\|1\|BB, 4V83\|1\|DB, 4V84\|1\|BB, 4V84\|1\|DB, 4V87\|1\|AB, 4V87\|1\|DB, 4V8A\|1\|AB, 4V8A\|1\|BB, 4V8B\|1\|BB, 4V8B\|1\|DB, 4V8C\|1\|AB, 4V8C\|1\|BB, 4V8D\|1\|BB, 4V8D\|1\|DB, 4V8E\|1\|AB, 4V8E\|1\|CB, 4V8F\|1\|AB, 4V8F\|1\|DB, 4V8G\|1\|BB, 4V8G\|1\|DB, 4V8H\|1\|BB, 4V8H\|1\|DB, 4V8I\|1\|BB, 4V8I\|1\|DB, 4V8N\|1\|BB, 4V8N\|1\|DB, 4V8Q\|1\|AB, 4V8X\|1\|BB, 4V8X\|1\|DB, 4V90\|1\|BB, 4V95\|1\|BB, 4V95\|1\|DB, 4V9A\|1\|BB, 4V9A\|1\|DB, 4V9B\|1\|BB, 4V9B\|1\|DB, 4V9H\|1\|BB, 4V9I\|1\|BB, 4V9I\|1\|DB, 4V9K\|1\|BB, 4V9K\|1\|DB, 4V9L\|1\|BB, 4V9L\|1\|DB, 4V9N\|1\|BB, 4V9N\|1\|DB, 4V9Q\|1\|AB, 4V9Q\|1\|CB, 4V9R\|1\|BB, 4V9R\|1\|DB, 4V9S\|1\|BB, 4V9S\|1\|DB, 4W2E\|1\|B, 4W2F\|1\|BB, 4W2F\|1\|DB, 4W2G\|1\|BB, 4W2G\|1\|DB, 4W2H\|1\|BB, 4W2H\|1\|DB, 4W2I\|1\|BB, 4W2I\|1\|DB, 4WT8\|1\|Cs, 4WT8\|1\|Ds	(8) 4WPO\|1\|AB, 4WPO\|1\|CB, 4WQF\|1\|AB, 4WQF\|1\|CB, 4WQU\|1\|AB, 4WQU\|1\|CB, 4WQY\|1\|AB, 4WQY\|1\|CB	(44) 4L71\|1\|RB, 4L71\|1\|YB, 4LEL\|1\|RB, 4LEL\|1\|YB, 4LFZ\|1\|RB, 4LFZ\|1\|YB, 4P6F\|1\|RB, 4P6F\|1\|YB, 4P70\|1\|RB, 4P70\|1\|YB, 4V42\|1\|BB, 4V4I\|1\|x, 4V4J\|1\|x, 4V4P\|1\|AB, 4V4R\|1\|BB, 4V4S\|1\|BB, 4V4T\|1\|BB, 4V4X\|1\|BB, 4V4Y\|1\|BB, 4V4Z\|1\|BB, 4V5F\|1\|BB, 4V5F\|1\|DB, 4V5G\|1\|BB, 4V5G\|1\|DB, 4V5M\|1\|BB, 4V5N\|1\|BB, 4V68\|1\|BB, 4V7K\|1\|AB, 4V7K\|1\|BB, 4V7P\|1\|BB, 4V7P\|1\|CB, 4V8J\|1\|BB, 4V8J\|1\|DB, 4V8O\|1\|BB, 4V8U\|1\|BB, 4V8U\|1\|DB, 4V97\|1\|BB, 4V97\|1\|DB, 4V9J\|1\|BB, 4V9J\|1\|DB, 4V9M\|1\|BB, 4V9M\|1\|DB, 4W29\|1\|BB, 4W29\|1\|DB

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	4V7M\|1\|DB	The structures of Capreomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3.45	119
2	1VY7\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	120
3	1VY6\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	120
4	1VY4\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	120
5	4W2H\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	120
6	4W2I\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	120
7	4W2F\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	120
8	4W2G\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	120
9	1VY5\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	120
10	4V9R\|1\|DB	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	120
11	4V9S\|1\|DB	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-RAY DIFFRACTION	3.1	120
12	4WQU\|1\|CB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	120
13	4WPO\|1\|CB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	120
14	4WQY\|1\|CB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	120
15	4WQF\|1\|CB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	120
16	4W2I\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	120
17	1VY7\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	120
18	4W2H\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	120
19	4W2G\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	120
20	4W2F\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	120
21	1VY5\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	120
22	1VY4\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	120
23	1VY6\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	120
24	4V9S\|1\|BB	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-RAY DIFFRACTION	3.1	120
25	4V9R\|1\|BB	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	120
26	4WQY\|1\|AB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	120
27	4WPO\|1\|AB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	120
28	4WQU\|1\|AB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	120
29	4WQF\|1\|AB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	120
30	4V95\|1\|BB	Crystal structure of YAEJ bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	120
31	4V8I\|1\|BB	Crystal structure of YfiA bound to the 70S ribosome.	X-RAY DIFFRACTION	2.7	120
32	4V8I\|1\|DB	Crystal structure of YfiA bound to the 70S ribosome.	X-RAY DIFFRACTION	2.7	120
33	4V8A\|1\|AB	The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.	X-RAY DIFFRACTION	3.2	120
34	4V8A\|1\|BB	The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.	X-RAY DIFFRACTION	3.2	120
35	4V8H\|1\|BB	Crystal structure of HPF bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	120
36	4V8H\|1\|DB	Crystal structure of HPF bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	120
37	4V8G\|1\|BB	Crystal structure of RMF bound to the 70S ribosome.	X-RAY DIFFRACTION	3	120
38	4V8G\|1\|DB	Crystal structure of RMF bound to the 70S ribosome.	X-RAY DIFFRACTION	3	120
39	4V95\|1\|DB	Crystal structure of YAEJ bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	120
40	4W2E\|1\|B	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	120
41	4V5E\|1\|DB	Insights into translational termination from the structure of RF2 bound to the ribosome	X-RAY DIFFRACTION	3.45	119
42	4V5E\|1\|BB	Insights into translational termination from the structure of RF2 bound to the ribosome	X-RAY DIFFRACTION	3.45	119
43	4V7M\|1\|BB	The structures of Capreomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3.45	119
44	4V6F\|1\|DB	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-RAY DIFFRACTION	3.1	122
45	4V6G\|1\|DB	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	120
46	4L47\|1\|YB	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	3.22	120
47	4LT8\|1\|YB	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	120
48	4LNT\|1\|YB	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	120
49	4LSK\|1\|YB	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	120
50	4V9A\|1\|BB	Crystal Structure of the 70S ribosome with tetracycline.	X-RAY DIFFRACTION	3.3	122
51	4V9B\|1\|BB	Crystal Structure of the 70S ribosome with tigecycline.	X-RAY DIFFRACTION	3.1	122
52	4V8B\|1\|BB	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	122
53	4V8C\|1\|AB	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	122
54	4V87\|1\|AB	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	122
55	4V8D\|1\|BB	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	122
56	4V8E\|1\|AB	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3.3	122
57	4V8F\|1\|AB	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-RAY DIFFRACTION	3.3	122
58	1VVJ\|1\|YB	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	120
59	1VVJ\|1\|RB	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	120
60	4LNT\|1\|RB	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	120
61	4L47\|1\|RB	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	3.22	120
62	4LT8\|1\|RB	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	120
63	4LSK\|1\|RB	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	120
64	4V6G\|1\|BB	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	120
65	4V9I\|1\|DB	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	119
66	4V9I\|1\|BB	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	119
67	4V5P\|1\|DB	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	119
68	4V5P\|1\|BB	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	119
69	4V5Q\|1\|DB	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	119
70	4V5Q\|1\|BB	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	119
71	4V5R\|1\|DB	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	119
72	4V5R\|1\|BB	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	119
73	4V5S\|1\|DB	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	119
74	4V5S\|1\|BB	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	119
75	4V5L\|1\|BB	The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog	X-RAY DIFFRACTION	3.1	119
76	4V8Q\|1\|AB	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-RAY DIFFRACTION	3.1	119
77	4V90\|1\|BB	Thermus thermophilus Ribosome	X-RAY DIFFRACTION	2.95	119
78	4V9H\|1\|BB	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-RAY DIFFRACTION	2.86	119
79	4V7Z\|1\|BB	Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.	X-RAY DIFFRACTION	3.1	119
80	4V7Z\|1\|DB	Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.	X-RAY DIFFRACTION	3.1	119
81	4V51\|1\|DB	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	119
82	4V51\|1\|BB	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	119
83	4V7Y\|1\|BB	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-RAY DIFFRACTION	3	119
84	4V7Y\|1\|DB	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-RAY DIFFRACTION	3	119
85	4V7X\|1\|BB	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-RAY DIFFRACTION	3	119
86	4V7X\|1\|DB	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-RAY DIFFRACTION	3	119
87	4V7W\|1\|BB	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-RAY DIFFRACTION	3	119
88	4V7W\|1\|DB	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-RAY DIFFRACTION	3	119
89	4V5D\|1\|BB	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-RAY DIFFRACTION	3.5	119
90	4V5D\|1\|DB	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-RAY DIFFRACTION	3.5	119
91	4V5J\|1\|DB	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-RAY DIFFRACTION	3.1	119
92	4V5J\|1\|BB	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-RAY DIFFRACTION	3.1	119
93	4V8N\|1\|BB	The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.	X-RAY DIFFRACTION	3.1	119
94	4V8N\|1\|DB	The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.	X-RAY DIFFRACTION	3.1	119
95	4V7J\|1\|AB	Structure of RelE nuclease bound to the 70S ribosome (precleavage state)	X-RAY DIFFRACTION	3.3	119
96	4V7J\|1\|BB	Structure of RelE nuclease bound to the 70S ribosome (precleavage state)	X-RAY DIFFRACTION	3.3	119
97	4V5K\|1\|DB	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	119
98	4V5K\|1\|BB	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	119
99	4V8X\|1\|DB	Structure of Thermus thermophilus ribosome	X-RAY DIFFRACTION	3.35	119
100	4V8X\|1\|BB	Structure of Thermus thermophilus ribosome	X-RAY DIFFRACTION	3.35	119
101	4WT8\|1\|Ds	Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex	X-RAY DIFFRACTION	3.4	119
102	4WT8\|1\|Cs	Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex	X-RAY DIFFRACTION	3.4	119
103	4V5A\|1\|BB	Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet	X-RAY DIFFRACTION	3.5	119
104	4V5A\|1\|DB	Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet	X-RAY DIFFRACTION	3.5	119
105	4V5C\|1\|DB	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	119
106	4V5C\|1\|BB	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	119
107	4V7L\|1\|DB	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	118
108	4V7L\|1\|BB	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	118
109	4V6A\|1\|DB	Structure of EF-P bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	119
110	4V6A\|1\|BB	Structure of EF-P bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	119
111	4V6F\|1\|AB	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-RAY DIFFRACTION	3.1	122
112	4V8D\|1\|DB	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	122
113	4V8F\|1\|DB	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-RAY DIFFRACTION	3.3	122
114	4V8E\|1\|CB	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3.3	122
115	4V8B\|1\|DB	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	122
116	4V8C\|1\|BB	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	122
117	4V87\|1\|DB	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	122
118	4V9A\|1\|DB	Crystal Structure of the 70S ribosome with tetracycline.	X-RAY DIFFRACTION	3.3	122
119	4V9B\|1\|DB	Crystal Structure of the 70S ribosome with tigecycline.	X-RAY DIFFRACTION	3.1	122
120	4V63\|1\|BB	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	119
121	4V63\|1\|DB	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	119
122	4V67\|1\|BB	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	119
123	4V67\|1\|DB	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	119
124	4V9Q\|1\|CB	Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.	X-RAY DIFFRACTION	3.4	119
125	4V9Q\|1\|AB	Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.	X-RAY DIFFRACTION	3.4	119
126	4V9N\|1\|BB	Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.	X-RAY DIFFRACTION	3.4	119
127	4V9N\|1\|DB	Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.	X-RAY DIFFRACTION	3.4	119
128	4V84\|1\|DB	Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.	X-RAY DIFFRACTION	3.4	119
129	4V84\|1\|BB	Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.	X-RAY DIFFRACTION	3.4	119
130	4V83\|1\|DB	Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.	X-RAY DIFFRACTION	3.5	119
131	4V83\|1\|BB	Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.	X-RAY DIFFRACTION	3.5	119
132	4V9L\|1\|BB	70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.	X-RAY DIFFRACTION	3.5	119
133	4V9L\|1\|DB	70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.	X-RAY DIFFRACTION	3.5	119
134	4V9K\|1\|DB	70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.	X-RAY DIFFRACTION	3.5	119
135	4V9K\|1\|BB	70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.	X-RAY DIFFRACTION	3.5	119

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.5_42622.3 Obsolete

Release history

Parents

Children