Equivalence class NR_3.5_43403.1 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 2ZH6|1|B (rep) | tRNA (34-MER) | Complex structure of AFCCA with tRNAminiDCU and ATP | X-ray diffraction | 2.5 | 2008-08-05 | ||||
2 | 2ZH4|1|B | tRNA (34-MER) | Complex structure of AFCCA with tRNAminiDCG | X-ray diffraction | 2.65 | 2008-08-05 | ||||
3 | 2ZHB|1|B | tRNA (34-MER) | Complex structure of AFCCA with tRNAminiDUC | X-ray diffraction | 3.05 | 2008-08-05 | ||||
4 | 2ZH5|1|B | tRNA (34-MER) | Complex structure of AFCCA with tRNAminiDCU | X-ray diffraction | 2.6 | 2008-08-05 | ||||
5 | 2DR9|1|B | tRNA (34-MER) | Complex structure of CCA-adding enzyme with tRNAminiDCC | X-ray diffraction | 2.8 | 2006-11-14 | ||||
6 | 2DVI|1|B | tRNA (34-MER) | Complex structure of CCA-adding enzyme, mini-DCC and CTP | X-ray diffraction | 2.61 | 2006-11-14 | ||||
7 | 2ZH3|1|B | tRNA (34-MER) | Complex structure of AFCCA with tRNAminiDCA | X-ray diffraction | 2.5 | 2008-08-05 | ||||
8 | 2ZH2|1|B | tRNA (34-MER) | Complex structure of AFCCA with tRNAminiDAC | X-ray diffraction | 2.66 | 2008-08-05 | ||||
9 | 2DRA|1|B | tRNA (34-MER) | Complex structure of CCA-adding enzyme with tRNAminiDCC and ATP | X-ray diffraction | 2.5 | 2006-11-14 | ||||
10 | 2ZH8|1|B | tRNA (34-MER) | synthetic construct | Complex structure of AFCCA with tRNAminiDGC | X-ray diffraction | 2.65 | 2008-08-05 |
Release history
Release | 2.0 | 2.1 | 2.2 | 2.3 | 2.4 | 2.5 | 2.6 | 2.7 | 2.8 | 2.9 | 2.10 | 2.11 | 2.12 | 2.13 | 2.14 | 2.15 | 2.16 | 2.17 | 2.18 | 2.19 | 2.20 | 2.21 | 2.22 | 2.23 | 2.24 | 2.25 | 2.26 | 2.27 | 2.28 | 2.29 | 2.30 | 2.31 | 2.32 | 2.33 | 2.34 | 2.35 | 2.36 | 2.37 | 2.38 | 2.39 | 2.40 | 2.41 | 2.42 | 2.43 | 2.44 | 2.45 | 2.46 | 2.47 | 2.48 | 2.49 | 2.50 | 2.51 | 2.52 | 2.53 | 2.54 | 2.55 | 2.56 | 2.57 | 2.58 | 2.59 | 2.60 | 2.61 | 2.62 | 2.63 | 2.64 | 2.65 | 2.66 | 2.67 | 2.68 | 2.69 | 2.70 | 2.71 | 2.72 | 2.73 | 2.74 | 2.75 | 2.76 | 2.77 | 2.78 | 2.79 | 2.80 | 2.81 | 2.82 | 2.83 | 2.84 | 2.85 | 2.86 | 2.87 | 2.88 | 2.89 | 2.90 | 2.91 | 2.92 |
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Date | 2014-12-05 | 2014-12-12 | 2014-12-19 | 2014-12-26 | 2015-01-02 | 2015-01-09 | 2015-01-16 | 2015-01-23 | 2015-01-30 | 2015-02-06 | 2015-02-13 | 2015-02-20 | 2015-02-27 | 2015-03-06 | 2015-03-13 | 2015-03-20 | 2015-03-27 | 2015-04-03 | 2015-04-10 | 2015-04-17 | 2015-04-24 | 2015-05-01 | 2015-05-08 | 2015-05-15 | 2015-05-22 | 2015-05-29 | 2015-06-05 | 2015-06-12 | 2015-06-19 | 2015-06-26 | 2015-07-03 | 2015-07-10 | 2015-07-17 | 2015-07-24 | 2015-07-31 | 2015-08-07 | 2015-08-14 | 2015-08-21 | 2015-08-28 | 2015-09-04 | 2015-09-11 | 2015-09-18 | 2015-09-25 | 2015-10-02 | 2015-10-09 | 2015-10-16 | 2015-10-23 | 2015-10-30 | 2015-11-06 | 2015-11-13 | 2015-11-20 | 2015-11-27 | 2015-12-04 | 2015-12-11 | 2015-12-18 | 2015-12-25 | 2016-01-01 | 2016-01-08 | 2016-01-15 | 2016-01-22 | 2016-01-29 | 2016-02-05 | 2016-02-12 | 2016-02-19 | 2016-02-26 | 2016-03-04 | 2016-03-11 | 2016-03-18 | 2016-03-25 | 2016-04-01 | 2016-04-08 | 2016-04-15 | 2016-04-22 | 2016-04-29 | 2016-05-06 | 2016-05-13 | 2016-05-20 | 2016-05-27 | 2016-06-03 | 2016-06-10 | 2016-06-17 | 2016-06-24 | 2016-07-01 | 2016-07-08 | 2016-07-15 | 2016-07-22 | 2016-07-29 | 2016-08-05 | 2016-08-12 | 2016-08-19 | 2016-08-26 | 2016-09-02 | 2016-09-09 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|---|---|---|---|---|
NR_3.5_43403.1 | NR_3.5_66108.1 | 2.93 | (10) 2DR9|1|B, 2DRA|1|B, 2DVI|1|B, 2ZH2|1|B, 2ZH3|1|B, 2ZH4|1|B, 2ZH5|1|B, 2ZH6|1|B, 2ZH8|1|B, 2ZHB|1|B | (0) | (8) 2DR5|1|B, 2DR7|1|B, 2DR8|1|B, 2DRB|1|B, 2ZH1|1|B, 2ZH7|1|B, 2ZH9|1|B, 2ZHA|1|B |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
#S | View | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|---|
1 | 2ZH5|1|B | Complex structure of AFCCA with tRNAminiDCU | X-RAY DIFFRACTION | 2.6 | 34 | |
2 | 2ZH3|1|B | Complex structure of AFCCA with tRNAminiDCA | X-RAY DIFFRACTION | 2.5 | 34 | |
3 | 2ZHB|1|B | Complex structure of AFCCA with tRNAminiDUC | X-RAY DIFFRACTION | 3.05 | 34 | |
4 | 2DVI|1|B | Complex structure of CCA-adding enzyme, mini-DCC and CTP | X-RAY DIFFRACTION | 2.61 | 34 | |
5 | 2DR9|1|B | Complex structure of CCA-adding enzyme with tRNAminiDCC | X-RAY DIFFRACTION | 2.8 | 34 | |
6 | 2DRA|1|B | Complex structure of CCA-adding enzyme with tRNAminiDCC and ATP | X-RAY DIFFRACTION | 2.5 | 34 | |
7 | 2ZH6|1|B | Complex structure of AFCCA with tRNAminiDCU and ATP | X-RAY DIFFRACTION | 2.5 | 34 | |
8 | 2ZH8|1|B | Complex structure of AFCCA with tRNAminiDGC | X-RAY DIFFRACTION | 2.65 | 34 | |
9 | 2ZH2|1|B | Complex structure of AFCCA with tRNAminiDAC | X-RAY DIFFRACTION | 2.66 | 34 | |
10 | 2ZH4|1|B | Complex structure of AFCCA with tRNAminiDCG | X-RAY DIFFRACTION | 2.65 | 34 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: