RNA 3D Hub //

Equivalence class NR_3.5_48488.2 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
13OL9|1|N+ 3OL9|1|O+ 3OL9|1|P (rep)RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.25382010-12-22
23OL9|1|J+ 3OL9|1|K+ 3OL9|1|LRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.25382010-12-22
33OL9|1|F+ 3OL9|1|GRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.25332010-12-22
43OL9|1|B+ 3OL9|1|CRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.25332010-12-22
53OLB|1|N+ 3OLB|1|ORNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.41332010-12-22
63OLB|1|J+ 3OLB|1|KRNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.41332010-12-22
73OLB|1|F+ 3OLB|1|GRNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.41322010-12-22
83OLB|1|B+ 3OLB|1|CRNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.41322010-12-22
93OL6|1|B+ 3OL6|1|CRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.5322010-12-22
103OL6|1|F+ 3OL6|1|GRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.5322010-12-22
113OL6|1|N+ 3OL6|1|ORNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.5332010-12-22
123OL6|1|J+ 3OL6|1|KRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.5332010-12-22
133OL8|1|B+ 3OL8|1|CRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3')Poliovirus polymerase elongation complex with CTP-MnX-ray diffraction2.75322010-12-22
143OL8|1|F+ 3OL8|1|GRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3')Poliovirus polymerase elongation complex with CTP-MnX-ray diffraction2.75322010-12-22
153OL8|1|J+ 3OL8|1|KRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3')Poliovirus polymerase elongation complex with CTP-MnX-ray diffraction2.75322010-12-22
163OL7|1|J+ 3OL7|1|KRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3')Poliovirus polymerase elongation complex with CTPX-ray diffraction2.7312010-12-22
173OL7|1|B+ 3OL7|1|CRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3')Poliovirus polymerase elongation complex with CTPX-ray diffraction2.7332010-12-22
183OL7|1|N+ 3OL7|1|ORNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3')Poliovirus polymerase elongation complex with CTPX-ray diffraction2.7312010-12-22
193OL8|1|N+ 3OL8|1|ORNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3')Poliovirus polymerase elongation complex with CTP-MnX-ray diffraction2.75322010-12-22
203OL7|1|F+ 3OL7|1|GRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3')Poliovirus polymerase elongation complex with CTPX-ray diffraction2.7332010-12-22
213OLA|1|B+ 3OLA|1|CDNA/RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-D(P*C)-3'), RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3')Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-ray diffraction2.55322010-12-22
223OLA|1|F+ 3OLA|1|GDNA/RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-D(P*C)-3'), RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3')Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-ray diffraction2.55322010-12-22
233OLA|1|N+ 3OLA|1|ORNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-ray diffraction2.55322010-12-22
243OLA|1|J+ 3OLA|1|KRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-ray diffraction2.55322010-12-22

Release history

Release4.0
Date2025-08-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
13OL7|1|F+ 3OL7|1|GPoliovirus polymerase elongation complex with CTPX-RAY DIFFRACTION2.733
23OL7|1|B+ 3OL7|1|CPoliovirus polymerase elongation complex with CTPX-RAY DIFFRACTION2.733
33OL8|1|F+ 3OL8|1|GPoliovirus polymerase elongation complex with CTP-MnX-RAY DIFFRACTION2.7532
43OL8|1|B+ 3OL8|1|CPoliovirus polymerase elongation complex with CTP-MnX-RAY DIFFRACTION2.7532
53OL8|1|J+ 3OL8|1|KPoliovirus polymerase elongation complex with CTP-MnX-RAY DIFFRACTION2.7532
63OL8|1|N+ 3OL8|1|OPoliovirus polymerase elongation complex with CTP-MnX-RAY DIFFRACTION2.7532
73OL7|1|J+ 3OL7|1|KPoliovirus polymerase elongation complex with CTPX-RAY DIFFRACTION2.731
83OL7|1|N+ 3OL7|1|OPoliovirus polymerase elongation complex with CTPX-RAY DIFFRACTION2.731
93OLB|1|B+ 3OLB|1|CPoliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4132
103OLB|1|F+ 3OLB|1|GPoliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4132
113OLB|1|N+ 3OLB|1|OPoliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4133
123OLB|1|J+ 3OLB|1|KPoliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4133
133OL9|1|N+ 3OL9|1|O+ 3OL9|1|PPoliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2538
143OL9|1|J+ 3OL9|1|K+ 3OL9|1|LPoliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2538
153OL9|1|B+ 3OL9|1|CPoliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2533
163OL9|1|F+ 3OL9|1|GPoliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2533
173OLA|1|F+ 3OLA|1|GPoliovirus polymerase elongation complex with 2'-deoxy-CTPX-RAY DIFFRACTION2.5532
183OLA|1|B+ 3OLA|1|CPoliovirus polymerase elongation complex with 2'-deoxy-CTPX-RAY DIFFRACTION2.5532
193OL6|1|B+ 3OL6|1|CPoliovirus polymerase elongation complexX-RAY DIFFRACTION2.532
203OL6|1|F+ 3OL6|1|GPoliovirus polymerase elongation complexX-RAY DIFFRACTION2.532
213OL6|1|N+ 3OL6|1|OPoliovirus polymerase elongation complexX-RAY DIFFRACTION2.533
223OL6|1|J+ 3OL6|1|KPoliovirus polymerase elongation complexX-RAY DIFFRACTION2.533
233OLA|1|N+ 3OLA|1|OPoliovirus polymerase elongation complex with 2'-deoxy-CTPX-RAY DIFFRACTION2.5532
243OLA|1|J+ 3OLA|1|KPoliovirus polymerase elongation complex with 2'-deoxy-CTPX-RAY DIFFRACTION2.5532

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0214 s