Equivalence class NR_3.5_50971.6 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9FXO|1|L8 (rep) | 5S ribosomal RNA | 5S_rRNA_chain_8 | Leishmania major strain Friedlin | Eukarya | RF00001 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA : LM32CS1C1 M2 OE MUTANT | Electron microscopy | 2.25 | 120 | 2025-07-23 |
| 2 | 8QIE|1|8 | 5S ribosomal RNA | 5S_rRNA_chain_8 | Leishmania major strain Friedlin | Eukarya | RF00001 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 mutant snoRNA overexpression, class 4 | Electron microscopy | 2.43 | 119 | 2025-01-01 |
| 3 | 9HL9|1|L8 | 5S ribosomal RNA | 5S_rRNA | Leishmania major strain Friedlin | Eukarya | RF00001 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN | Electron microscopy | 2.5 | 120 | 2025-10-15 |
| 4 | 8A98|1|8 | 5S ribosomal RNA | 5S_rRNA_chain_8 | Leishmania major strain Friedlin | Eukarya | RF00001 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT | Electron microscopy | 2.46 | 118 | 2023-10-11 |
| 5 | 8OVJ|1|8 | 5S ribosomal RNA | 5S_rRNA_chain_8 | Leishmania major strain Friedlin | Eukarya | RF00001 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN | Electron microscopy | 2.4 | 119 | 2024-05-08 |
| 6 | 8QHU|1|8 | 5S ribosomal RNA | 5S_rRNA_chain_8 | Leishmania major strain Friedlin | Eukarya | RF00001 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 snoRNA overexpression | Electron microscopy | 2.72 | 119 | 2025-02-12 |
| 7 | 8RXH|1|L8 | 5S ribosomal RNA | 5S_rRNA_chain_8 | Leishmania major strain Friedlin | Eukarya | RF00001 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN | Electron microscopy | 2.93 | 120 | 2024-05-15 |
| 8 | 8RXX|1|L8 | 5S ribosomal RNA | 5S_rRNA_chain_8 | Leishmania major strain Friedlin | Eukarya | RF00001 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN | Electron microscopy | 2.97 | 119 | 2024-05-15 |
| 9 | 8A3W|1|8 | 5S ribosomal RNA | 5S_rRNA_chain_8 | Leishmania major strain Friedlin | Eukarya | RF00001 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : WILD TYPE | Electron microscopy | 2.89 | 119 | 2023-12-20 |
Release history
| Release | 4.9 |
|---|---|
| Date | 2025-10-15 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9FXO|1|L8 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA : LM32CS1C1 M2 OE MUTANT | ELECTRON MICROSCOPY | 2.25 | 120 | |
| 2 | 8QHU|1|8 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 snoRNA overexpression | ELECTRON MICROSCOPY | 2.72 | 119 | |
| 3 | 8QIE|1|8 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 mutant snoRNA overexpression, class 4 | ELECTRON MICROSCOPY | 2.43 | 119 | |
| 4 | 9HL9|1|L8 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN | ELECTRON MICROSCOPY | 2.5 | 120 | |
| 5 | 8A3W|1|8 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : WILD TYPE | ELECTRON MICROSCOPY | 2.89 | 119 | |
| 6 | 8A98|1|8 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT | ELECTRON MICROSCOPY | 2.46 | 118 | |
| 7 | 8OVJ|1|8 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN | ELECTRON MICROSCOPY | 2.4 | 119 | |
| 8 | 8RXH|1|L8 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN | ELECTRON MICROSCOPY | 2.93 | 120 | |
| 9 | 8RXX|1|L8 | CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN | ELECTRON MICROSCOPY | 2.97 | 119 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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