Equivalence class NR_3.5_52091.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9TI5|1|D (rep) | Transfer RNA | mRNA, tRNA(Ser3) | Escherichia coli str. K-12 substr. MG1655 | Bacteria | RF00005 | Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU) | Electron microscopy | 2.2 | 93 | 2026-07-22 |
| 2 | 9H0L|1|Y | Transfer RNA | mRNA, tRNA(Ser3) | Escherichia coli | Bacteria | RF00005 | 70S ribosome with cognate tRNASer3 bound to A-site AGC codon | Electron microscopy | 2.49 | 93 | 2025-05-28 |
| 3 | 9TI6|1|D | Transfer RNA | mRNA, tRNA(Ser3) | Escherichia coli str. K-12 substr. MG1655 | Bacteria | RF00005 | Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU) | Electron microscopy | 2.62 | 93 | 2026-07-22 |
| 4 | 9GXX|1|Y | Transfer RNA | tRNA(Ser3) | Escherichia coli | Bacteria | RF00005 | 70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codon | Electron microscopy | 2.61 | 93 | 2025-05-28 |
| 5 | 9TI9|1|D | Transfer RNA | tRNA(Ser3) | Escherichia coli str. K-12 substr. MG1655 | Bacteria | RF00005 | Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA) | Electron microscopy | 3.06 | 93 | 2026-07-22 |
| 6 | 9TI7|1|D | Transfer RNA | tRNA(Ser3) | Escherichia coli str. K-12 substr. MG1655 | Bacteria | RF00005 | Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2) | Electron microscopy | 2.76 | 93 | 2026-07-22 |
Release history
| Release | 4.49 |
|---|---|
| Date | 2026-07-22 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9TI6|1|D | Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU) | ELECTRON MICROSCOPY | 2.62 | 93 | |
| 2 | 9TI5|1|D | Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU) | ELECTRON MICROSCOPY | 2.2 | 93 | |
| 3 | 9TI7|1|D | Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2) | ELECTRON MICROSCOPY | 2.76 | 93 | |
| 4 | 9TI9|1|D | Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA) | ELECTRON MICROSCOPY | 3.06 | 93 | |
| 5 | 9GXX|1|Y | 70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codon | ELECTRON MICROSCOPY | 2.61 | 93 | |
| 6 | 9H0L|1|Y | 70S ribosome with cognate tRNASer3 bound to A-site AGC codon | ELECTRON MICROSCOPY | 2.49 | 93 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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