#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
18QYX|1|B2 (rep)5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human 60S ribosomal subunitElectron microscopy1.781192024-12-11
28GLP|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)Electron microscopy1.671202023-04-19
39C3H|1|L95S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.Electron microscopy21202024-12-04
48A3D|1|B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human mature large subunit of the ribosome with eIF6 and homoharringtonine boundElectron microscopy1.671202023-03-08
58QFD|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001UFL1 E3 ligase bound 60S ribosomeElectron microscopy2.21192024-02-21
68YOO|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with 100 um TigecyclineElectron microscopy21202024-07-10
78QOI|1|L75S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNAElectron microscopy1.91202024-06-12
88JDK|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.261202023-12-06
99SPF|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINEElectron microscopy2.41192026-01-21
108G5Y|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)Electron microscopy2.291202023-04-19
119SPI|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINEElectron microscopy2.41192026-01-21
128YOP|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with 4 um TigecyclineElectron microscopy2.21202024-07-10
138JDJ|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)Electron microscopy2.51202023-12-06
149PBE|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human 80S ribosome (composite map)Electron microscopy2.191202025-12-24
158JDL|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)Electron microscopy2.421202023-12-06
168K2C|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with TigecyclineElectron microscopy2.41202024-07-10
179GUL|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complexElectron microscopy2.21202025-09-24
188XSX|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2Electron microscopy2.41202024-07-10
197XNY|1|L25S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellsElectron microscopy2.51202023-04-05
208G60|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)Electron microscopy2.541202023-04-19
216ZMI|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexElectron microscopy2.61202020-08-19
228FLE|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State L2)Electron microscopy2.481202023-07-12
238JDM|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)Electron microscopy2.671202023-12-06
249P8B|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human eEF1A-A/T-P-E state 80S ribosomeElectron microscopy2.481202025-12-24
257OW7|1|B5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001EIF6-bound large subunit of the human ribosomeElectron microscopy2.21202022-10-05
267XNX|1|L25S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellsElectron microscopy2.71202023-04-05
278G5Z|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)Electron microscopy2.641202023-04-19
289P7D|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating class4 80S ribosomeElectron microscopy2.571202025-12-24
298FLB|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State K2)Electron microscopy2.551202023-07-12
309FQZ|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1Electron microscopy2.851192026-01-14
319P7E|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating class5 80S ribosomeElectron microscopy2.591202025-12-24
328IFD|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Dibekacin-added human 80S ribosomeElectron microscopy2.591202024-02-14
338FL7|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State J2)Electron microscopy2.551202023-07-12
348FLD|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State L1)Electron microscopy2.581202023-07-12
358FLF|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State L3)Electron microscopy2.651202023-07-12
366ZM7|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexElectron microscopy2.71202020-07-29
378FL6|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State J1)Electron microscopy2.621202023-07-12
388FLA|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State K1)Electron microscopy2.631202023-07-12
398IFE|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Arbekacin-added human 80S ribosomeElectron microscopy2.571202024-02-14
408OJ5|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)Electron microscopy2.91202024-02-21
419RPV|1|M75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of the ZAK-bound human disomeElectron microscopy2.351202025-12-10
429P7O|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human AT-P-Z state ribosomeElectron microscopy2.651202025-12-24
437F5S|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human delta-METTL18 60S ribosomeElectron microscopy2.721202022-06-22
449P73|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human eEF2-A/P-P/E state 80S ribosomeElectron microscopy2.661202025-12-24
456Y6X|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Tetracenomycin X bound to the human ribosomeElectron microscopy2.81202020-07-08
469P9J|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human 60S ribosomeElectron microscopy2.871202025-12-24
478FLC|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State K3)Electron microscopy2.761202023-07-12
488FL9|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State J3)Electron microscopy2.751202023-07-12
499P7Y|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human A-P-E state 80S ribosomeElectron microscopy2.751202025-12-24
509P7C|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating class3 80S ribosomeElectron microscopy2.781202025-12-24
519RPV|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of the ZAK-bound human disomeElectron microscopy2.351202025-12-10
528G6J|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)Electron microscopy2.81202023-04-19
539PA7|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human 80S consensus ribosome with EBP1Electron microscopy2.671202025-12-24
549P9I|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human unrotated hibernating without CCDC124 state 80S ribosomeElectron microscopy2.771202025-12-24
559P7A|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human hibernating class2 80S ribosomeElectron microscopy2.811202025-12-24
569P7X|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human A-P-Z state 80S ribosomeElectron microscopy2.831202025-12-24
578FL3|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State I2)Electron microscopy2.531172023-07-12
589B0P|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human Hibernating class1 80S ribosomeElectron microscopy2.821202025-03-19
599P7K|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human post eEF1A-A/T-P-E state 80S ribosomeElectron microscopy2.81202025-12-24
609P76|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human eEF1A-A/T-P state 80S ribosomeElectron microscopy2.831202025-12-24
619P9H|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human unrotated hibernating with CCDC124 state 80S ribosomeElectron microscopy2.841202025-12-24
629P7N|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Post-eEF1A-A/T-P-Z state 80S ribosomeElectron microscopy2.831202025-12-24
638G61|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)Electron microscopy2.941202023-04-19
646QZP|1|L75S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.91202019-04-24
659P72|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human P-E state 80S ribosomeElectron microscopy2.81202025-12-24
668FL2|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State I1)Electron microscopy2.671172023-07-12
679GMO|1|B5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16Electron microscopy2.591182024-10-02
686ZME|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexElectron microscopy31202020-08-12
699P78|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosomeElectron microscopy2.91202025-12-24
708XSY|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)Electron microscopy31202024-07-10
719P7W|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human A-P state 80S ribosomeElectron microscopy2.931202025-12-24
726ZMO|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexElectron microscopy3.11202020-08-19
739GY4|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)Electron microscopy31202025-05-14
748Y0X|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Dormant ribosome with SERBP1Electron microscopy3.31202024-02-07
758OHD|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)Electron microscopy3.11202024-02-21
769P6Z|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human P-Z state 80S ribosomeElectron microscopy2.971202025-12-24
776LQM|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a pre-60S ribosomal subunit - state CElectron microscopy3.091202020-08-26
786OLE|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsElectron microscopy3.11192019-06-19
796Y2L|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in POST stateElectron microscopy31202020-04-15
808UIK|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ HHT and CHX treated human 80S ribosome with EBP1 (consensus map)Electron microscopy2.961202025-04-30
818Y0W|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001dormant ribosome with eIF5A, eEF2 and SERBP1Electron microscopy3.41202024-02-07
826OM0|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsElectron microscopy3.11192019-06-19
839M0P|1|L75S ribosomal RNA5S ribosomal RNA|HOMO SAPIENSHomo sapiensEukaryaRF00001Cryo-EM structure of human 80S ribosome in complex with montanineElectron microscopy2.781202026-01-14
846XA1|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of a drug-like compound stalled human translation termination complexElectron microscopy2.81202020-10-07
858IDT|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State GElectron microscopy2.81202023-08-09
866Z6M|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1Electron microscopy3.11202020-07-29
879P9K|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human 60S ribosome with EIF6Electron microscopy2.961202025-12-24
889P7L|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Post-eEF1A-AT-P state 80S ribosomeElectron microscopy2.921202025-12-24
897QVP|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy31202022-10-12
908FL4|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State I3)Electron microscopy2.891172023-07-12
919G8M|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001human 80S ribosome bound by a SKI2-exosome complexElectron microscopy3.31202024-10-23
928XSZ|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNAElectron microscopy3.21202024-07-10
939KZU|1|L75S ribosomal RNA5S_ribosomal_RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3Electron microscopy31202025-12-03
946LSR|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a pre-60S ribosomal subunit - state BElectron microscopy3.131202020-08-26
959P8H|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human A/P-P/E state 80S ribosomeElectron microscopy2.981202025-12-24
969N9J|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory transloconElectron microscopy3.21202025-11-19
978UKB|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosomeElectron microscopy3.051202024-11-20
986LU8|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a human pre-60S ribosomal subunit - state AElectron microscopy3.131202020-08-26
999P8C|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating class1 (rotate3) without E tRNA state 80S ribosomeElectron microscopy3.111202025-12-24
1006Y0G|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of human ribosome in classical-PRE stateElectron microscopy3.21202020-04-15
1019P79|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating rotate3 with Z site tRNA state 80S ribosomeElectron microscopy3.11202025-12-24
1028OJ8|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)Electron microscopy3.31202024-02-21
1039KZX|1|L75S ribosomal RNA5S_ribosomal_RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3Electron microscopy3.31202025-12-03
1047QVP|1|L95S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy31202022-10-12
1058OJ0|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)Electron microscopy3.31202024-02-21
1068INF|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State F'Electron microscopy31202023-08-09
1076LSS|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a pre-60S ribosomal subunit - state preAElectron microscopy3.231202020-08-26
1088IDY|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State FElectron microscopy31202023-08-09
1097BHP|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human Ebp1 - 80S ribosomeElectron microscopy3.31202021-02-03
1109PKG|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human P state 80S ribosomeElectron microscopy3.261202025-12-24
1116Y57|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in hybrid-PRE stateElectron microscopy3.51202020-04-15
1129B0Q|1|l75S ribosomal RNARNA (120-MER)5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human top-back di-ribosome structure (Composite map)Electron microscopy3.21202025-03-19
1136OLI|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)Electron microscopy3.51192019-06-19
1149QIW|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human pre-60S - State 3Electron microscopy3.041202025-04-30
1158INE|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State G'Electron microscopy3.21202023-08-09
1169B0Q|1|L75S ribosomal RNARNA (120-MER)5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human top-back di-ribosome structure (Composite map)Electron microscopy3.21202025-03-19
1178RL2|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human pre-60S - State 5Electron microscopy2.841202025-01-15
1188FL0|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nucleolar pre-60S ribosomal subunit (State H)Electron microscopy2.911202023-07-12
1196OLG|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)Electron microscopy3.41192019-06-19
1208IE3|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State EElectron microscopy3.31202023-08-09
1218INK|1|35S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State DElectron microscopy3.21152023-08-09
1228IPY|1|35S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State D'Electron microscopy3.21152023-08-09
1238IPD|1|35S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State CElectron microscopy3.21152023-08-09
1248IR1|1|W5S ribosomal RNA5S RNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State AElectron microscopy3.31202023-08-09
1258IR3|1|55S ribosomal RNA5S RNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State B'Electron microscopy3.51202023-08-09
1269AZC|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human 80S ribosome (Consensus map)Electron microscopy2.191202025-04-30
1275AJ0|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo electron microscopy of actively translating human polysomes (POST state).Electron microscopy3.51192015-05-20
1286Z6N|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)Electron microscopy2.91202020-07-29
1296Z6L|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human CCDC124 bound to 80S ribosomesElectron microscopy31202020-07-29

Release history

Release4.23
Date2026-01-21

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
18FL0|1|L4Human nucleolar pre-60S ribosomal subunit (State H)ELECTRON MICROSCOPY2.91120
28RL2|1|L7Human pre-60S - State 5ELECTRON MICROSCOPY2.84120
39QIW|1|L7Human pre-60S - State 3ELECTRON MICROSCOPY3.04120
48FL2|1|L4Human nuclear pre-60S ribosomal subunit (State I1)ELECTRON MICROSCOPY2.67117
58FL3|1|L4Human nuclear pre-60S ribosomal subunit (State I2)ELECTRON MICROSCOPY2.53117
68FL4|1|L4Human nuclear pre-60S ribosomal subunit (State I3)ELECTRON MICROSCOPY2.89117
77BHP|1|L7Cryo-EM structure of the human Ebp1 - 80S ribosomeELECTRON MICROSCOPY3.3120
85AJ0|1|A4Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.5119
96OLG|1|A4Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.4119
106OLI|1|EStructure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.5119
116OLE|1|EHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.1119
126OM0|1|EHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.1119
137OW7|1|BEIF6-bound large subunit of the human ribosomeELECTRON MICROSCOPY2.2120
146QZP|1|L7High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.9120
159B0Q|1|l7In situ human top-back di-ribosome structure (Composite map)ELECTRON MICROSCOPY3.2120
169B0Q|1|L7In situ human top-back di-ribosome structure (Composite map)ELECTRON MICROSCOPY3.2120
177F5S|1|L7human delta-METTL18 60S ribosomeELECTRON MICROSCOPY2.72120
188QOI|1|L7Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNAELECTRON MICROSCOPY1.9120
199AZC|1|L7In situ human 80S ribosome (Consensus map)ELECTRON MICROSCOPY2.19120
208UIK|1|L7In situ HHT and CHX treated human 80S ribosome with EBP1 (consensus map)ELECTRON MICROSCOPY2.96120
218UKB|1|L7In situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosomeELECTRON MICROSCOPY3.05120
229PKG|1|L7In situ human P state 80S ribosomeELECTRON MICROSCOPY3.26120
239P8C|1|L7In situ human Hibernating class1 (rotate3) without E tRNA state 80S ribosomeELECTRON MICROSCOPY3.11120
249P79|1|L7In situ human Hibernating rotate3 with Z site tRNA state 80S ribosomeELECTRON MICROSCOPY3.1120
259B0P|1|L7In situ human Hibernating class1 80S ribosomeELECTRON MICROSCOPY2.82120
269P78|1|L7In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosomeELECTRON MICROSCOPY2.9120
279P7W|1|L7In situ human A-P state 80S ribosomeELECTRON MICROSCOPY2.93120
289P7X|1|L7In situ human A-P-Z state 80S ribosomeELECTRON MICROSCOPY2.83120
299P7E|1|L7In situ human Hibernating class5 80S ribosomeELECTRON MICROSCOPY2.59120
309P7D|1|L7In situ human Hibernating class4 80S ribosomeELECTRON MICROSCOPY2.57120
319P7Y|1|L7In situ human A-P-E state 80S ribosomeELECTRON MICROSCOPY2.75120
329P7A|1|L7In situ human hibernating class2 80S ribosomeELECTRON MICROSCOPY2.81120
339P7C|1|L7In situ human Hibernating class3 80S ribosomeELECTRON MICROSCOPY2.78120
349P6Z|1|L7In situ human P-Z state 80S ribosomeELECTRON MICROSCOPY2.97120
359P7L|1|L7In situ human Post-eEF1A-AT-P state 80S ribosomeELECTRON MICROSCOPY2.92120
369P7N|1|L7In situ human Post-eEF1A-A/T-P-Z state 80S ribosomeELECTRON MICROSCOPY2.83120
379P7O|1|L7In situ human AT-P-Z state ribosomeELECTRON MICROSCOPY2.65120
389P9I|1|L7In situ human unrotated hibernating without CCDC124 state 80S ribosomeELECTRON MICROSCOPY2.77120
399P9H|1|L7In situ human unrotated hibernating with CCDC124 state 80S ribosomeELECTRON MICROSCOPY2.84120
409P8B|1|L7In situ human eEF1A-A/T-P-E state 80S ribosomeELECTRON MICROSCOPY2.48120
419P7K|1|L7In situ human post eEF1A-A/T-P-E state 80S ribosomeELECTRON MICROSCOPY2.8120
429P76|1|L7In situ human eEF1A-A/T-P state 80S ribosomeELECTRON MICROSCOPY2.83120
439P72|1|L7In situ human P-E state 80S ribosomeELECTRON MICROSCOPY2.8120
449PBE|1|L7In situ human 80S ribosome (composite map)ELECTRON MICROSCOPY2.19120
459PA7|1|L7In situ human 80S consensus ribosome with EBP1ELECTRON MICROSCOPY2.67120
469P9J|1|L7In situ human 60S ribosomeELECTRON MICROSCOPY2.87120
479P9K|1|L7In situ human 60S ribosome with EIF6ELECTRON MICROSCOPY2.96120
489P8H|1|L7In situ human A/P-P/E state 80S ribosomeELECTRON MICROSCOPY2.98120
499P73|1|L7In situ human eEF2-A/P-P/E state 80S ribosomeELECTRON MICROSCOPY2.66120
506Y6X|1|L7Tetracenomycin X bound to the human ribosomeELECTRON MICROSCOPY2.8120
518XSX|1|L7Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2ELECTRON MICROSCOPY2.4120
529SPI|1|L7CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINEELECTRON MICROSCOPY2.4119
538QYX|1|B2Human 60S ribosomal subunitELECTRON MICROSCOPY1.78119
548XSZ|1|L7Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNAELECTRON MICROSCOPY3.2120
558XSY|1|L7Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)ELECTRON MICROSCOPY3120
568K2C|1|L7Cryo-EM structure of the human 80S ribosome with TigecyclineELECTRON MICROSCOPY2.4120
578YOO|1|L7Cryo-EM structure of the human 80S ribosome with 100 um TigecyclineELECTRON MICROSCOPY2120
588YOP|1|L7Cryo-EM structure of the human 80S ribosome with 4 um TigecyclineELECTRON MICROSCOPY2.2120
598A3D|1|BHuman mature large subunit of the ribosome with eIF6 and homoharringtonine boundELECTRON MICROSCOPY1.67120
609FQZ|1|L7CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1ELECTRON MICROSCOPY2.85119
619C3H|1|L9Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.ELECTRON MICROSCOPY2120
629SPF|1|L7CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINEELECTRON MICROSCOPY2.4119
638G61|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)ELECTRON MICROSCOPY2.94120
648G5Z|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)ELECTRON MICROSCOPY2.64120
658G6J|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)ELECTRON MICROSCOPY2.8120
668G60|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)ELECTRON MICROSCOPY2.54120
678G5Y|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)ELECTRON MICROSCOPY2.29120
688GLP|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)ELECTRON MICROSCOPY1.67120
699RPV|1|M7Structure of the ZAK-bound human disomeELECTRON MICROSCOPY2.35120
709GMO|1|BeIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16ELECTRON MICROSCOPY2.59118
719GY4|1|760S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)ELECTRON MICROSCOPY3120
728OJ0|1|760S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)ELECTRON MICROSCOPY3.3120
738OJ8|1|760S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)ELECTRON MICROSCOPY3.3120
748OHD|1|760S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)ELECTRON MICROSCOPY3.1120
758OJ5|1|760S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)ELECTRON MICROSCOPY2.9120
767XNX|1|L2High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellsELECTRON MICROSCOPY2.7120
777XNY|1|L2High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellsELECTRON MICROSCOPY2.5120
788Y0X|1|L7Dormant ribosome with SERBP1ELECTRON MICROSCOPY3.3120
798Y0W|1|L7dormant ribosome with eIF5A, eEF2 and SERBP1ELECTRON MICROSCOPY3.4120
806ZMI|1|L7SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.6120
816ZM7|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.7120
826ZMO|1|L7SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.1120
836ZME|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY3120
846Z6M|1|L7Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1ELECTRON MICROSCOPY3.1120
856Z6N|1|L7Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.9120
866Z6L|1|L7Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY3120
876XA1|1|L7Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.8120
886LQM|1|5Cryo-EM structure of a pre-60S ribosomal subunit - state CELECTRON MICROSCOPY3.09120
898JDK|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.26120
908JDJ|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)ELECTRON MICROSCOPY2.5120
918QFD|1|7UFL1 E3 ligase bound 60S ribosomeELECTRON MICROSCOPY2.2119
928JDL|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)ELECTRON MICROSCOPY2.42120
938JDM|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)ELECTRON MICROSCOPY2.67120
946Y0G|1|L7Structure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.2120
956Y2L|1|L7Structure of human ribosome in POST stateELECTRON MICROSCOPY3120
967QVP|1|L7Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY3120
976Y57|1|L7Structure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.5120
989RPV|1|L7Structure of the ZAK-bound human disomeELECTRON MICROSCOPY2.35120
997QVP|1|L9Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY3120
1009M0P|1|L7Cryo-EM structure of human 80S ribosome in complex with montanineELECTRON MICROSCOPY2.78120
1018IFD|1|1BDibekacin-added human 80S ribosomeELECTRON MICROSCOPY2.59120
1028IFE|1|1BArbekacin-added human 80S ribosomeELECTRON MICROSCOPY2.57120
1039KZX|1|L7Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3ELECTRON MICROSCOPY3.3120
1049KZU|1|L7Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3ELECTRON MICROSCOPY3120
1056LSR|1|5Cryo-EM structure of a pre-60S ribosomal subunit - state BELECTRON MICROSCOPY3.13120
1066LSS|1|5Cryo-EM structure of a pre-60S ribosomal subunit - state preAELECTRON MICROSCOPY3.23120
1076LU8|1|5Cryo-EM structure of a human pre-60S ribosomal subunit - state AELECTRON MICROSCOPY3.13120
1088FLD|1|L4Human nuclear pre-60S ribosomal subunit (State L1)ELECTRON MICROSCOPY2.58120
1098FLE|1|L4Human nuclear pre-60S ribosomal subunit (State L2)ELECTRON MICROSCOPY2.48120
1108FLF|1|L4Human nuclear pre-60S ribosomal subunit (State L3)ELECTRON MICROSCOPY2.65120
1118FL9|1|L4Human nuclear pre-60S ribosomal subunit (State J3)ELECTRON MICROSCOPY2.75120
1128FL6|1|L4Human nuclear pre-60S ribosomal subunit (State J1)ELECTRON MICROSCOPY2.62120
1138FL7|1|L4Human nuclear pre-60S ribosomal subunit (State J2)ELECTRON MICROSCOPY2.55120
1148FLC|1|L4Human nuclear pre-60S ribosomal subunit (State K3)ELECTRON MICROSCOPY2.76120
1158FLB|1|L4Human nuclear pre-60S ribosomal subunit (State K2)ELECTRON MICROSCOPY2.55120
1168FLA|1|L4Human nuclear pre-60S ribosomal subunit (State K1)ELECTRON MICROSCOPY2.63120
1178IR3|1|5human nuclear pre-60S ribosomal particle - State B'ELECTRON MICROSCOPY3.5120
1188IR1|1|Whuman nuclear pre-60S ribosomal particle - State AELECTRON MICROSCOPY3.3120
1198IDT|1|5human nuclear pre-60S ribosomal particle - State GELECTRON MICROSCOPY2.8120
1208IDY|1|5human nuclear pre-60S ribosomal particle - State FELECTRON MICROSCOPY3120
1218INF|1|5human nuclear pre-60S ribosomal particle - State F'ELECTRON MICROSCOPY3120
1228INE|1|5human nuclear pre-60S ribosomal particle - State G'ELECTRON MICROSCOPY3.2120
1238IE3|1|5human nuclear pre-60S ribosomal particle - State EELECTRON MICROSCOPY3.3120
1249N9J|1|L7Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory transloconELECTRON MICROSCOPY3.2120
1259GUL|1|L7Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complexELECTRON MICROSCOPY2.2120
1269G8M|1|L7human 80S ribosome bound by a SKI2-exosome complexELECTRON MICROSCOPY3.3120
1278IPD|1|3human nuclear pre-60S ribosomal particle - State CELECTRON MICROSCOPY3.2115
1288INK|1|3human nuclear pre-60S ribosomal particle - State DELECTRON MICROSCOPY3.2115
1298IPY|1|3human nuclear pre-60S ribosomal particle - State D'ELECTRON MICROSCOPY3.2115

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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