NR_3.5_52752.63

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	8QYX\|1\|B2 (rep)	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human 60S ribosomal subunit	Electron microscopy	1.78	119	2024-12-11
2	8GLP\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)	Electron microscopy	1.67	120	2023-04-19
3	9O3W\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain	Electron microscopy	1.9	120	2026-03-04
4	9TV2\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV	Electron microscopy	2.1	119	2026-07-01
5	9C3H\|1\|L9	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.	Electron microscopy	2	120	2024-12-04
6	8A3D\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound	Electron microscopy	1.67	120	2023-03-08
7	9TT7\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	80S ribosome of WT EBV infected human B-cells	Electron microscopy	2.2	119	2026-07-22
8	9I2D\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	NMT1-NAC bound human RNC with 10 amino acid ARF1-linker	Electron microscopy	2.19	120	2026-02-04
9	8QFD\|1\|7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	UFL1 E3 ligase bound 60S ribosome	Electron microscopy	2.2	119	2024-02-21
10	8YOO\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline	Electron microscopy	2	120	2024-07-10
11	9O3Y\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain	Electron microscopy	2.2	120	2026-03-04
12	8QOI\|1\|L7	5S ribosomal RNA	5S rRNA (120-MER)	Homo sapiens	Eukarya	RF00001	Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA	Electron microscopy	1.9	120	2024-06-12
13	9O3V\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human 80S ribosome stalled on MYC nascent chain	Electron microscopy	2.2	120	2026-03-04
14	8JDK\|1\|E	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	Electron microscopy	2.26	120	2023-12-06
15	9SPF\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE	Electron microscopy	2.4	119	2026-01-21
16	9S3D\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	NAC bound human RNC with 58 amino acid ARF1-linker	Electron microscopy	2.32	120	2026-02-18
17	8G5Y\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)	Electron microscopy	2.29	120	2023-04-19
18	9SPI\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE	Electron microscopy	2.4	119	2026-01-21
19	8YOP\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of the human 80S ribosome with 4 um Tigecycline	Electron microscopy	2.2	120	2024-07-10
20	9S3B\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1	Electron microscopy	2.38	120	2026-02-18
21	9S3C\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2	Electron microscopy	2.42	120	2026-02-18
22	9MNC\|1\|L9	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human 80S ribosome bound to small molecule SW393071	Electron microscopy	2.33	120	2026-06-24
23	8JDJ\|1\|E	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	Electron microscopy	2.5	120	2023-12-06
24	9QLO\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	NMT1-NAC bound human RNC with full length ARF1 - State 1	Electron microscopy	2.47	120	2026-02-18
25	9PBE\|1\|L7	5S ribosomal RNA	5S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF00001	In situ human 80S ribosome (composite map)	Electron microscopy	2.19	120	2025-12-24
26	8JDL\|1\|E	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)	Electron microscopy	2.42	120	2023-12-06
27	8K2C\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of the human 80S ribosome with Tigecycline	Electron microscopy	2.4	120	2024-07-10
28	9GUL\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex	Electron microscopy	2.2	120	2025-09-24
29	8XSX\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2	Electron microscopy	2.4	120	2024-07-10
30	9QLQ\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	NMT1-NAC bound human RNC with full length ARF1 - alternative State	Electron microscopy	2.57	120	2026-02-18
31	7XNY\|1\|L2	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells	Electron microscopy	2.5	120	2023-04-05
32	9PKD\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ CHX and HHT treated 80S consensus ribosome	Electron microscopy	2.42	120	2026-07-15
33	8G60\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)	Electron microscopy	2.54	120	2023-04-19
34	29IX\|1\|DB	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.	Electron microscopy	2.2	119	2026-09-30
35	9VXN\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs	Electron microscopy	2.51	120	2026-07-22
36	6ZMI\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex	Electron microscopy	2.6	120	2020-08-19
37	8FLE\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State L2)	Electron microscopy	2.48	120	2023-07-12
38	8JDM\|1\|E	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)	Electron microscopy	2.67	120	2023-12-06
39	9RUC\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)	Electron microscopy	2.5	119	2026-05-13
40	9P8B\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human eEF1A-A/T-P-E state 80S ribosome	Electron microscopy	2.48	120	2025-12-24
41	7OW7\|1\|B	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	EIF6-bound large subunit of the human ribosome	Electron microscopy	2.2	120	2022-10-05
42	29IW\|1\|DB	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.	Electron microscopy	1.77	119	2026-09-30
43	7XNX\|1\|L2	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells	Electron microscopy	2.7	120	2023-04-05
44	9T6D\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	NAA40-NAC bound human 80S (combined translation states)	Electron microscopy	2.67	120	2026-09-30
45	8G5Z\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)	Electron microscopy	2.64	120	2023-04-19
46	9P7D\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human Hibernating class4 80S ribosome	Electron microscopy	2.57	120	2025-12-24
47	8FLB\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State K2)	Electron microscopy	2.55	120	2023-07-12
48	9FQZ\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1	Electron microscopy	2.85	119	2026-01-14
49	9P7E\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human Hibernating class5 80S ribosome	Electron microscopy	2.59	120	2025-12-24
50	8IFD\|1\|1B	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Dibekacin-added human 80S ribosome	Electron microscopy	2.59	120	2024-02-14
51	8FL7\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State J2)	Electron microscopy	2.55	120	2023-07-12
52	8FLD\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State L1)	Electron microscopy	2.58	120	2023-07-12
53	8FLF\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State L3)	Electron microscopy	2.65	120	2023-07-12
54	9QLP\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	NMT1-NAC bound human RNC with full length ARF1 - State 2	Electron microscopy	2.75	120	2026-02-18
55	6ZM7\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex	Electron microscopy	2.7	120	2020-07-29
56	9WW4\|1\|AB	5S ribosomal RNA	5S rRNA (120-MER)	Homo sapiens	Eukarya	RF00001	human 80S ribosome non-rotated state	Electron microscopy	2.48	120	2026-09-16
57	8FL6\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State J1)	Electron microscopy	2.62	120	2023-07-12
58	8FLA\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State K1)	Electron microscopy	2.63	120	2023-07-12
59	8IFE\|1\|1B	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Arbekacin-added human 80S ribosome	Electron microscopy	2.57	120	2024-02-14
60	8OJ5\|1\|7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	Electron microscopy	2.9	120	2024-02-21
61	9RPV\|1\|M7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Structure of the ZAK-bound human disome	Electron microscopy	2.35	120	2025-12-10
62	9P7O\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human AT-P-Z state ribosome	Electron microscopy	2.65	120	2025-12-24
63	7F5S\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	human delta-METTL18 60S ribosome	Electron microscopy	2.72	120	2022-06-22
64	9P73\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human eEF2-A/P-P/E state 80S ribosome	Electron microscopy	2.66	120	2025-12-24
65	6Y6X\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Tetracenomycin X bound to the human ribosome	Electron microscopy	2.8	120	2020-07-08
66	9P9J\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human 60S ribosome	Electron microscopy	2.87	120	2025-12-24
67	9RUA\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)	Electron microscopy	2.9	119	2026-06-03
68	8FLC\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State K3)	Electron microscopy	2.76	120	2023-07-12
69	8FL9\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State J3)	Electron microscopy	2.75	120	2023-07-12
70	9P7Y\|1\|L7	5S ribosomal RNA	5S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF00001	In situ human A-P-E state 80S ribosome	Electron microscopy	2.75	120	2025-12-24
71	29IZ\|1\|BB	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Dormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2	Electron microscopy	2.08	119	2026-09-30
72	9P7C\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human Hibernating class3 80S ribosome	Electron microscopy	2.78	120	2025-12-24
73	9RPV\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Structure of the ZAK-bound human disome	Electron microscopy	2.35	120	2025-12-10
74	8G6J\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)	Electron microscopy	2.8	120	2023-04-19
75	9PA7\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human 80S consensus ribosome with EBP1	Electron microscopy	2.67	120	2025-12-24
76	9P9I\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human unrotated hibernating without CCDC124 state 80S ribosome	Electron microscopy	2.77	120	2025-12-24
77	9P7A\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human hibernating class2 80S ribosome	Electron microscopy	2.81	120	2025-12-24
78	9P7X\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human A-P-Z state 80S ribosome	Electron microscopy	2.83	120	2025-12-24
79	9T6C\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	NAA40-NAC bound active human 80S	Electron microscopy	2.91	120	2026-09-30
80	8FL3\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State I2)	Electron microscopy	2.53	117	2023-07-12
81	9B0P\|1\|L7	5S ribosomal RNA	5S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF00001	In situ human Hibernating class1 80S ribosome	Electron microscopy	2.82	120	2025-03-19
82	9P7K\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human post eEF1A-A/T-P-E state 80S ribosome	Electron microscopy	2.8	120	2025-12-24
83	9P76\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human eEF1A-A/T-P state 80S ribosome	Electron microscopy	2.83	120	2025-12-24
84	9P9H\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human unrotated hibernating with CCDC124 state 80S ribosome	Electron microscopy	2.84	120	2025-12-24
85	9P7N\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human Post-eEF1A-A/T-P-Z state 80S ribosome	Electron microscopy	2.83	120	2025-12-24
86	8G61\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)	Electron microscopy	2.94	120	2023-04-19
87	6QZP\|1\|L7	5S ribosomal RNA	5S rRNA (120-MER)	Homo sapiens	Eukarya	RF00001	High-resolution cryo-EM structure of the human 80S ribosome	Electron microscopy	2.9	120	2019-04-24
88	9P72\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human P-E state 80S ribosome	Electron microscopy	2.8	120	2025-12-24
89	9RU8\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)	Electron microscopy	3	119	2026-06-03
90	8FL2\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State I1)	Electron microscopy	2.67	117	2023-07-12
91	9GMO\|1\|B	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16	Electron microscopy	2.59	118	2024-10-02
92	9I2E\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	NMT1-NAC bound human ribosome (combined translational states)	Electron microscopy	2.95	120	2026-02-04
93	6ZME\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex	Electron microscopy	3	120	2020-08-12
94	9P78\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome	Electron microscopy	2.9	120	2025-12-24
95	8XSY\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)	Electron microscopy	3	120	2024-07-10
96	9WW5\|1\|AB	5S ribosomal RNA	5S rRNA (120-MER)	Homo sapiens	Eukarya	RF00001	human 80S ribosome rotated state	Electron microscopy	2.69	120	2026-09-16
97	9RU9\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)	Electron microscopy	2.97	120	2026-06-03
98	9P7W\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human A-P state 80S ribosome	Electron microscopy	2.93	120	2025-12-24
99	6ZMO\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex	Electron microscopy	3.1	120	2020-08-19
100	9GY4\|1\|7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)	Electron microscopy	3	120	2025-05-14
101	8Y0X\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Dormant ribosome with SERBP1	Electron microscopy	3.3	120	2024-02-07
102	8OHD\|1\|7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)	Electron microscopy	3.1	120	2024-02-21
103	9P6Z\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human P-Z state 80S ribosome	Electron microscopy	2.97	120	2025-12-24
104	6LQM\|1\|5	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of a pre-60S ribosomal subunit - state C	Electron microscopy	3.09	120	2020-08-26
105	9RU7\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)	Electron microscopy	3	119	2026-05-13
106	6OLE\|1\|E	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs	Electron microscopy	3.1	119	2019-06-19
107	6Y2L\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Structure of human ribosome in POST state	Electron microscopy	3	120	2020-04-15
108	29IY\|1\|CB	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human monosomes, focus on 60S subunit; control.	Electron microscopy	2.36	119	2026-09-30
109	8Y0W\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	dormant ribosome with eIF5A, eEF2 and SERBP1	Electron microscopy	3.4	120	2024-02-07
110	6OM0\|1\|E	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs	Electron microscopy	3.1	119	2019-06-19
111	9M0P\|1\|L7	5S ribosomal RNA	5S ribosomal RNA\|HOMO SAPIENS	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of human 80S ribosome in complex with montanine	Electron microscopy	2.78	120	2026-01-14
112	6XA1\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Structure of a drug-like compound stalled human translation termination complex	Electron microscopy	2.8	120	2020-10-07
113	8IDT\|1\|5	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	human nuclear pre-60S ribosomal particle - State G	Electron microscopy	2.8	120	2023-08-09
114	6Z6M\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1	Electron microscopy	3.1	120	2020-07-29
115	22TU\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human 80S ribosome in complex with DHX29	Electron microscopy	3	120	2026-04-01
116	9P9K\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human 60S ribosome with EIF6	Electron microscopy	2.96	120	2025-12-24
117	9P7L\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human Post-eEF1A-AT-P state 80S ribosome	Electron microscopy	2.92	120	2025-12-24
118	7QVP\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Human collided disome (di-ribosome) stalled on XBP1 mRNA	Electron microscopy	3	120	2022-10-12
119	8FL4\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nuclear pre-60S ribosomal subunit (State I3)	Electron microscopy	2.89	117	2023-07-12
120	9G8M\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	human 80S ribosome bound by a SKI2-exosome complex	Electron microscopy	3.3	120	2024-10-23
121	8XSZ\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNA	Electron microscopy	3.2	120	2024-07-10
122	9KZU\|1\|L7	5S ribosomal RNA	5S_ribosomal_RNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3	Electron microscopy	3	120	2025-12-03
123	6LSR\|1\|5	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of a pre-60S ribosomal subunit - state B	Electron microscopy	3.13	120	2020-08-26
124	9P8H\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human A/P-P/E state 80S ribosome	Electron microscopy	2.98	120	2025-12-24
125	9N9J\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon	Electron microscopy	3.2	120	2025-11-19
126	6LU8\|1\|5	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of a human pre-60S ribosomal subunit - state A	Electron microscopy	3.13	120	2020-08-26
127	9PKB\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ HHT and CHX treated human hibernating state 80S ribosome	Electron microscopy	3.05	120	2026-07-15
128	9I14\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE	Electron microscopy	3.34	119	2026-01-28
129	28LN\|1\|B7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	XBP1u-stalled RPL4 RNC in complex with NAC	Electron microscopy	2.7	120	2026-06-10
130	9P8C\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human Hibernating class1 (rotate3) without E tRNA state 80S ribosome	Electron microscopy	3.11	120	2025-12-24
131	6Y0G\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Structure of human ribosome in classical-PRE state	Electron microscopy	3.2	120	2020-04-15
132	9P79\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome	Electron microscopy	3.1	120	2025-12-24
133	8OJ8\|1\|7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)	Electron microscopy	3.3	120	2024-02-21
134	9KZX\|1\|L7	5S ribosomal RNA	5S_ribosomal_RNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3	Electron microscopy	3.3	120	2025-12-03
135	7QVP\|1\|L9	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Human collided disome (di-ribosome) stalled on XBP1 mRNA	Electron microscopy	3	120	2022-10-12
136	8OJ0\|1\|7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)	Electron microscopy	3.3	120	2024-02-21
137	8INF\|1\|5	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	human nuclear pre-60S ribosomal particle - State F'	Electron microscopy	3	120	2023-08-09
138	6LSS\|1\|5	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of a pre-60S ribosomal subunit - state preA	Electron microscopy	3.23	120	2020-08-26
139	8IDY\|1\|5	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	human nuclear pre-60S ribosomal particle - State F	Electron microscopy	3	120	2023-08-09
140	30HI\|1\|B7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Ternary complex of translating ribosome, NAC and NatB	Electron microscopy	3.2	119	2026-10-07
141	7BHP\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of the human Ebp1 - 80S ribosome	Electron microscopy	3.3	120	2021-02-03
142	9PKG\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In situ human P state 80S ribosome	Electron microscopy	3.26	120	2025-12-24
143	9T6I\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In vitro reconstituted METAP1-NAA40-NAC bound 80S - State 2	Electron microscopy	3.44	120	2026-09-30
144	6Y57\|1\|L7	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Structure of human ribosome in hybrid-PRE state	Electron microscopy	3.5	120	2020-04-15
145	9QER\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human pre-60S - State 1A	Electron microscopy	2.9	120	2026-09-30
146	9B0Q\|1\|l7	5S ribosomal RNA	RNA (120-MER)5S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF00001	In situ human top-back di-ribosome structure (Composite map)	Electron microscopy	3.2	120	2025-03-19
147	6OLI\|1\|E	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)	Electron microscopy	3.5	119	2019-06-19
148	9QIW\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human pre-60S - State 3	Electron microscopy	3.04	120	2025-04-30
149	9QET\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human pre-60S - State 1B	Electron microscopy	3.13	120	2026-09-30
150	8INE\|1\|5	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	human nuclear pre-60S ribosomal particle - State G'	Electron microscopy	3.2	120	2023-08-09
151	9WW6\|1\|AB	5S ribosomal RNA	5S rRNA (120-MER)	Homo sapiens	Eukarya	RF00001	human 80S ribosome delta eL41 non-rotated state	Electron microscopy	2.83	120	2026-09-23
152	9B0Q\|1\|L7	5S ribosomal RNA	RNA (120-MER)5S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF00001	In situ human top-back di-ribosome structure (Composite map)	Electron microscopy	3.2	120	2025-03-19
153	8RL2\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human pre-60S - State 5	Electron microscopy	2.84	120	2025-01-15
154	8FL0\|1\|L4	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Human nucleolar pre-60S ribosomal subunit (State H)	Electron microscopy	2.91	120	2023-07-12
155	6OLG\|1\|A4	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)	Electron microscopy	3.4	119	2019-06-19
156	9Y4G\|1\|A7	5S ribosomal RNA	5S ribosomal RNA	Ctenomyidae	Eukaryota	RF00001	Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)	Electron microscopy	3.3	121	2026-02-18
157	9Y49\|1\|A7	5S ribosomal RNA	5S rRNA (121-MER)	Ctenomyidae	Eukaryota	RF00001	Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)	Electron microscopy	3.4	121	2026-02-18
158	9WW7\|1\|AB	5S ribosomal RNA	5S rRNA (120-MER)	Homo sapiens	Eukarya	RF00001	human 80S ribosome delta eL41 rotated state	Electron microscopy	2.91	120	2026-09-30
159	8IE3\|1\|5	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	human nuclear pre-60S ribosomal particle - State E	Electron microscopy	3.3	120	2023-08-09
160	8INK\|1\|3	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	human nuclear pre-60S ribosomal particle - State D	Electron microscopy	3.2	115	2023-08-09
161	8IPY\|1\|3	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	human nuclear pre-60S ribosomal particle - State D'	Electron microscopy	3.2	115	2023-08-09
162	8IPD\|1\|3	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	human nuclear pre-60S ribosomal particle - State C	Electron microscopy	3.2	115	2023-08-09
163	8IR1\|1\|W	5S ribosomal RNA	5S RNA	Homo sapiens	Eukarya	RF00001	human nuclear pre-60S ribosomal particle - State A	Electron microscopy	3.3	120	2023-08-09
164	8IR3\|1\|5	5S ribosomal RNA	5S RNA	Homo sapiens	Eukarya	RF00001	human nuclear pre-60S ribosomal particle - State B'	Electron microscopy	3.5	120	2023-08-09
165	5AJ0\|1\|A4	5S ribosomal RNA	5S ribosomal RNA	Homo sapiens	Eukarya	RF00001	Cryo electron microscopy of actively translating human polysomes (POST state).	Electron microscopy	3.5	119	2015-05-20
166	6Z6N\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)	Electron microscopy	2.9	120	2020-07-29
167	6Z6L\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	Cryo-EM structure of human CCDC124 bound to 80S ribosomes	Electron microscopy	3	120	2020-07-29
168	9RG7\|1\|L7	5S ribosomal RNA	5S rRNA	Homo sapiens	Eukarya	RF00001	In vitro reconstituted NAA40-NAC bound 80S	Electron microscopy	2.72	120	2026-06-17

Release history

Release	4.60
Date	2026-10-07

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	8IPY\|1\|3	human nuclear pre-60S ribosomal particle - State D'	ELECTRON MICROSCOPY	3.2	115
2	8INK\|1\|3	human nuclear pre-60S ribosomal particle - State D	ELECTRON MICROSCOPY	3.2	115
3	8IPD\|1\|3	human nuclear pre-60S ribosomal particle - State C	ELECTRON MICROSCOPY	3.2	115
4	9TT7\|1\|L7	80S ribosome of WT EBV infected human B-cells	ELECTRON MICROSCOPY	2.2	119
5	9TV2\|1\|L7	80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV	ELECTRON MICROSCOPY	2.1	119
6	6OM0\|1\|E	Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs	ELECTRON MICROSCOPY	3.1	119
7	6OLE\|1\|E	Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs	ELECTRON MICROSCOPY	3.1	119
8	6OLI\|1\|E	Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)	ELECTRON MICROSCOPY	3.5	119
9	6OLG\|1\|A4	Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)	ELECTRON MICROSCOPY	3.4	119
10	5AJ0\|1\|A4	Cryo electron microscopy of actively translating human polysomes (POST state).	ELECTRON MICROSCOPY	3.5	119
11	9Y4G\|1\|A7	Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)	ELECTRON MICROSCOPY	3.3	121
12	9Y49\|1\|A7	Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)	ELECTRON MICROSCOPY	3.4	121
13	7BHP\|1\|L7	Cryo-EM structure of the human Ebp1 - 80S ribosome	ELECTRON MICROSCOPY	3.3	120
14	9RU7\|1\|L7	WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)	ELECTRON MICROSCOPY	3	119
15	9KZX\|1\|L7	Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3	ELECTRON MICROSCOPY	3.3	120
16	9KZU\|1\|L7	Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3	ELECTRON MICROSCOPY	3	120
17	6Y0G\|1\|L7	Structure of human ribosome in classical-PRE state	ELECTRON MICROSCOPY	3.2	120
18	6Y2L\|1\|L7	Structure of human ribosome in POST state	ELECTRON MICROSCOPY	3	120
19	9T6C\|1\|L7	NAA40-NAC bound active human 80S	ELECTRON MICROSCOPY	2.91	120
20	9S3D\|1\|L7	NAC bound human RNC with 58 amino acid ARF1-linker	ELECTRON MICROSCOPY	2.32	120
21	9S3C\|1\|L7	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2	ELECTRON MICROSCOPY	2.42	120
22	9S3B\|1\|L7	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1	ELECTRON MICROSCOPY	2.38	120
23	9I2D\|1\|L7	NMT1-NAC bound human RNC with 10 amino acid ARF1-linker	ELECTRON MICROSCOPY	2.19	120
24	9QLO\|1\|L7	NMT1-NAC bound human RNC with full length ARF1 - State 1	ELECTRON MICROSCOPY	2.47	120
25	9QLP\|1\|L7	NMT1-NAC bound human RNC with full length ARF1 - State 2	ELECTRON MICROSCOPY	2.75	120
26	9QLQ\|1\|L7	NMT1-NAC bound human RNC with full length ARF1 - alternative State	ELECTRON MICROSCOPY	2.57	120
27	7QVP\|1\|L7	Human collided disome (di-ribosome) stalled on XBP1 mRNA	ELECTRON MICROSCOPY	3	120
28	22TU\|1\|L7	Human 80S ribosome in complex with DHX29	ELECTRON MICROSCOPY	3	120
29	6Y57\|1\|L7	Structure of human ribosome in hybrid-PRE state	ELECTRON MICROSCOPY	3.5	120
30	7QVP\|1\|L9	Human collided disome (di-ribosome) stalled on XBP1 mRNA	ELECTRON MICROSCOPY	3	120
31	9RPV\|1\|L7	Structure of the ZAK-bound human disome	ELECTRON MICROSCOPY	2.35	120
32	9I14\|1\|L7	CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE	ELECTRON MICROSCOPY	3.34	119
33	8IFD\|1\|1B	Dibekacin-added human 80S ribosome	ELECTRON MICROSCOPY	2.59	120
34	8IFE\|1\|1B	Arbekacin-added human 80S ribosome	ELECTRON MICROSCOPY	2.57	120
35	9M0P\|1\|L7	Cryo-EM structure of human 80S ribosome in complex with montanine	ELECTRON MICROSCOPY	2.78	120
36	8QFD\|1\|7	UFL1 E3 ligase bound 60S ribosome	ELECTRON MICROSCOPY	2.2	119
37	8JDL\|1\|E	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)	ELECTRON MICROSCOPY	2.42	120
38	8JDJ\|1\|E	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.5	120
39	8JDK\|1\|E	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.26	120
40	8JDM\|1\|E	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)	ELECTRON MICROSCOPY	2.67	120
41	6LQM\|1\|5	Cryo-EM structure of a pre-60S ribosomal subunit - state C	ELECTRON MICROSCOPY	3.09	120
42	9RU8\|1\|L7	WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)	ELECTRON MICROSCOPY	3	119
43	8Y0X\|1\|L7	Dormant ribosome with SERBP1	ELECTRON MICROSCOPY	3.3	120
44	8Y0W\|1\|L7	dormant ribosome with eIF5A, eEF2 and SERBP1	ELECTRON MICROSCOPY	3.4	120
45	9MNC\|1\|L9	Human 80S ribosome bound to small molecule SW393071	ELECTRON MICROSCOPY	2.33	120
46	8OJ5\|1\|7	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	ELECTRON MICROSCOPY	2.9	120
47	9RUA\|1\|L7	RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)	ELECTRON MICROSCOPY	2.9	119
48	7XNX\|1\|L2	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells	ELECTRON MICROSCOPY	2.7	120
49	7XNY\|1\|L2	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells	ELECTRON MICROSCOPY	2.5	120
50	6ZME\|1\|L7	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex	ELECTRON MICROSCOPY	3	120
51	6ZM7\|1\|L7	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex	ELECTRON MICROSCOPY	2.7	120
52	6ZMI\|1\|L7	SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex	ELECTRON MICROSCOPY	2.6	120
53	6ZMO\|1\|L7	SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex	ELECTRON MICROSCOPY	3.1	120
54	6Z6L\|1\|L7	Cryo-EM structure of human CCDC124 bound to 80S ribosomes	ELECTRON MICROSCOPY	3	120
55	6Z6N\|1\|L7	Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)	ELECTRON MICROSCOPY	2.9	120
56	6Z6M\|1\|L7	Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1	ELECTRON MICROSCOPY	3.1	120
57	6XA1\|1\|L7	Structure of a drug-like compound stalled human translation termination complex	ELECTRON MICROSCOPY	2.8	120
58	6QZP\|1\|L7	High-resolution cryo-EM structure of the human 80S ribosome	ELECTRON MICROSCOPY	2.9	120
59	9T6I\|1\|L7	In vitro reconstituted METAP1-NAA40-NAC bound 80S - State 2	ELECTRON MICROSCOPY	3.44	120
60	9RPV\|1\|M7	Structure of the ZAK-bound human disome	ELECTRON MICROSCOPY	2.35	120
61	9RU9\|1\|L7	RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)	ELECTRON MICROSCOPY	2.97	120
62	8G61\|1\|L7	mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)	ELECTRON MICROSCOPY	2.94	120
63	8G5Z\|1\|L7	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)	ELECTRON MICROSCOPY	2.64	120
64	8G6J\|1\|L7	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)	ELECTRON MICROSCOPY	2.8	120
65	8G60\|1\|L7	mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)	ELECTRON MICROSCOPY	2.54	120
66	8G5Y\|1\|L7	mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)	ELECTRON MICROSCOPY	2.29	120
67	8GLP\|1\|L7	mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)	ELECTRON MICROSCOPY	1.67	120
68	9C3H\|1\|L9	Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.	ELECTRON MICROSCOPY	2	120
69	9FQZ\|1\|L7	CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1	ELECTRON MICROSCOPY	2.85	119
70	9SPF\|1\|L7	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE	ELECTRON MICROSCOPY	2.4	119
71	9O3Y\|1\|L7	Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain	ELECTRON MICROSCOPY	2.2	120
72	9O3W\|1\|L7	Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain	ELECTRON MICROSCOPY	1.9	120
73	9O3V\|1\|L7	Human 80S ribosome stalled on MYC nascent chain	ELECTRON MICROSCOPY	2.2	120
74	9SPI\|1\|L7	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE	ELECTRON MICROSCOPY	2.4	119
75	29IW\|1\|DB	Human monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.	ELECTRON MICROSCOPY	1.77	119
76	29IZ\|1\|BB	Dormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2	ELECTRON MICROSCOPY	2.08	119
77	29IX\|1\|DB	Human monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.	ELECTRON MICROSCOPY	2.2	119
78	29IY\|1\|CB	Human monosomes, focus on 60S subunit; control.	ELECTRON MICROSCOPY	2.36	119
79	8QYX\|1\|B2	Human 60S ribosomal subunit	ELECTRON MICROSCOPY	1.78	119
80	9RG7\|1\|L7	In vitro reconstituted NAA40-NAC bound 80S	ELECTRON MICROSCOPY	2.72	120
81	8XSZ\|1\|L7	Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNA	ELECTRON MICROSCOPY	3.2	120
82	8XSY\|1\|L7	Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)	ELECTRON MICROSCOPY	3	120
83	8YOP\|1\|L7	Cryo-EM structure of the human 80S ribosome with 4 um Tigecycline	ELECTRON MICROSCOPY	2.2	120
84	8YOO\|1\|L7	Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline	ELECTRON MICROSCOPY	2	120
85	8K2C\|1\|L7	Cryo-EM structure of the human 80S ribosome with Tigecycline	ELECTRON MICROSCOPY	2.4	120
86	8A3D\|1\|B	Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound	ELECTRON MICROSCOPY	1.67	120
87	7F5S\|1\|L7	human delta-METTL18 60S ribosome	ELECTRON MICROSCOPY	2.72	120
88	8QOI\|1\|L7	Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA	ELECTRON MICROSCOPY	1.9	120
89	9WW4\|1\|AB	human 80S ribosome non-rotated state	ELECTRON MICROSCOPY	2.48	120
90	9WW5\|1\|AB	human 80S ribosome rotated state	ELECTRON MICROSCOPY	2.69	120
91	9VXN\|1\|L7	Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs	ELECTRON MICROSCOPY	2.51	120
92	9T6D\|1\|L7	NAA40-NAC bound human 80S (combined translation states)	ELECTRON MICROSCOPY	2.67	120
93	8XSX\|1\|L7	Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2	ELECTRON MICROSCOPY	2.4	120
94	6Y6X\|1\|L7	Tetracenomycin X bound to the human ribosome	ELECTRON MICROSCOPY	2.8	120
95	9P7W\|1\|L7	In situ human A-P state 80S ribosome	ELECTRON MICROSCOPY	2.93	120
96	9P7L\|1\|L7	In situ human Post-eEF1A-AT-P state 80S ribosome	ELECTRON MICROSCOPY	2.92	120
97	9P6Z\|1\|L7	In situ human P-Z state 80S ribosome	ELECTRON MICROSCOPY	2.97	120
98	9P7X\|1\|L7	In situ human A-P-Z state 80S ribosome	ELECTRON MICROSCOPY	2.83	120
99	9P7E\|1\|L7	In situ human Hibernating class5 80S ribosome	ELECTRON MICROSCOPY	2.59	120
100	9P7D\|1\|L7	In situ human Hibernating class4 80S ribosome	ELECTRON MICROSCOPY	2.57	120
101	9P7Y\|1\|L7	In situ human A-P-E state 80S ribosome	ELECTRON MICROSCOPY	2.75	120
102	9PA7\|1\|L7	In situ human 80S consensus ribosome with EBP1	ELECTRON MICROSCOPY	2.67	120
103	9PBE\|1\|L7	In situ human 80S ribosome (composite map)	ELECTRON MICROSCOPY	2.19	120
104	9P9K\|1\|L7	In situ human 60S ribosome with EIF6	ELECTRON MICROSCOPY	2.96	120
105	9P9J\|1\|L7	In situ human 60S ribosome	ELECTRON MICROSCOPY	2.87	120
106	9P76\|1\|L7	In situ human eEF1A-A/T-P state 80S ribosome	ELECTRON MICROSCOPY	2.83	120
107	9P72\|1\|L7	In situ human P-E state 80S ribosome	ELECTRON MICROSCOPY	2.8	120
108	9P7K\|1\|L7	In situ human post eEF1A-A/T-P-E state 80S ribosome	ELECTRON MICROSCOPY	2.8	120
109	9P8B\|1\|L7	In situ human eEF1A-A/T-P-E state 80S ribosome	ELECTRON MICROSCOPY	2.48	120
110	9P9H\|1\|L7	In situ human unrotated hibernating with CCDC124 state 80S ribosome	ELECTRON MICROSCOPY	2.84	120
111	9P9I\|1\|L7	In situ human unrotated hibernating without CCDC124 state 80S ribosome	ELECTRON MICROSCOPY	2.77	120
112	9P7N\|1\|L7	In situ human Post-eEF1A-A/T-P-Z state 80S ribosome	ELECTRON MICROSCOPY	2.83	120
113	9P7O\|1\|L7	In situ human AT-P-Z state ribosome	ELECTRON MICROSCOPY	2.65	120
114	9PKD\|1\|L7	In situ CHX and HHT treated 80S consensus ribosome	ELECTRON MICROSCOPY	2.42	120
115	9P7C\|1\|L7	In situ human Hibernating class3 80S ribosome	ELECTRON MICROSCOPY	2.78	120
116	9P7A\|1\|L7	In situ human hibernating class2 80S ribosome	ELECTRON MICROSCOPY	2.81	120
117	9P73\|1\|L7	In situ human eEF2-A/P-P/E state 80S ribosome	ELECTRON MICROSCOPY	2.66	120
118	9P8H\|1\|L7	In situ human A/P-P/E state 80S ribosome	ELECTRON MICROSCOPY	2.98	120
119	9B0P\|1\|L7	In situ human Hibernating class1 80S ribosome	ELECTRON MICROSCOPY	2.82	120
120	9P78\|1\|L7	In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome	ELECTRON MICROSCOPY	2.9	120
121	9PKB\|1\|L7	In situ HHT and CHX treated human hibernating state 80S ribosome	ELECTRON MICROSCOPY	3.05	120
122	9P79\|1\|L7	In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome	ELECTRON MICROSCOPY	3.1	120
123	9P8C\|1\|L7	In situ human Hibernating class1 (rotate3) without E tRNA state 80S ribosome	ELECTRON MICROSCOPY	3.11	120
124	9PKG\|1\|L7	In situ human P state 80S ribosome	ELECTRON MICROSCOPY	3.26	120
125	9GMO\|1\|B	eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16	ELECTRON MICROSCOPY	2.59	118
126	8OJ0\|1\|7	60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)	ELECTRON MICROSCOPY	3.3	120
127	8OJ8\|1\|7	60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)	ELECTRON MICROSCOPY	3.3	120
128	8OHD\|1\|7	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)	ELECTRON MICROSCOPY	3.1	120
129	9GY4\|1\|7	60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)	ELECTRON MICROSCOPY	3	120
130	9I2E\|1\|L7	NMT1-NAC bound human ribosome (combined translational states)	ELECTRON MICROSCOPY	2.95	120
131	9RUC\|1\|L7	WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)	ELECTRON MICROSCOPY	2.5	119
132	9B0Q\|1\|L7	In situ human top-back di-ribosome structure (Composite map)	ELECTRON MICROSCOPY	3.2	120
133	9B0Q\|1\|l7	In situ human top-back di-ribosome structure (Composite map)	ELECTRON MICROSCOPY	3.2	120
134	7OW7\|1\|B	EIF6-bound large subunit of the human ribosome	ELECTRON MICROSCOPY	2.2	120
135	28LN\|1\|B7	XBP1u-stalled RPL4 RNC in complex with NAC	ELECTRON MICROSCOPY	2.7	120
136	30HI\|1\|B7	Ternary complex of translating ribosome, NAC and NatB	ELECTRON MICROSCOPY	3.2	119
137	9WW6\|1\|AB	human 80S ribosome delta eL41 non-rotated state	ELECTRON MICROSCOPY	2.83	120
138	9WW7\|1\|AB	human 80S ribosome delta eL41 rotated state	ELECTRON MICROSCOPY	2.91	120
139	6LSR\|1\|5	Cryo-EM structure of a pre-60S ribosomal subunit - state B	ELECTRON MICROSCOPY	3.13	120
140	6LU8\|1\|5	Cryo-EM structure of a human pre-60S ribosomal subunit - state A	ELECTRON MICROSCOPY	3.13	120
141	6LSS\|1\|5	Cryo-EM structure of a pre-60S ribosomal subunit - state preA	ELECTRON MICROSCOPY	3.23	120
142	8FLB\|1\|L4	Human nuclear pre-60S ribosomal subunit (State K2)	ELECTRON MICROSCOPY	2.55	120
143	8FLA\|1\|L4	Human nuclear pre-60S ribosomal subunit (State K1)	ELECTRON MICROSCOPY	2.63	120
144	8FLC\|1\|L4	Human nuclear pre-60S ribosomal subunit (State K3)	ELECTRON MICROSCOPY	2.76	120
145	8FL7\|1\|L4	Human nuclear pre-60S ribosomal subunit (State J2)	ELECTRON MICROSCOPY	2.55	120
146	8FL6\|1\|L4	Human nuclear pre-60S ribosomal subunit (State J1)	ELECTRON MICROSCOPY	2.62	120
147	8FL9\|1\|L4	Human nuclear pre-60S ribosomal subunit (State J3)	ELECTRON MICROSCOPY	2.75	120
148	8FLF\|1\|L4	Human nuclear pre-60S ribosomal subunit (State L3)	ELECTRON MICROSCOPY	2.65	120
149	8FLE\|1\|L4	Human nuclear pre-60S ribosomal subunit (State L2)	ELECTRON MICROSCOPY	2.48	120
150	8FLD\|1\|L4	Human nuclear pre-60S ribosomal subunit (State L1)	ELECTRON MICROSCOPY	2.58	120
151	9N9J\|1\|L7	Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon	ELECTRON MICROSCOPY	3.2	120
152	9GUL\|1\|L7	Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex	ELECTRON MICROSCOPY	2.2	120
153	8INE\|1\|5	human nuclear pre-60S ribosomal particle - State G'	ELECTRON MICROSCOPY	3.2	120
154	8INF\|1\|5	human nuclear pre-60S ribosomal particle - State F'	ELECTRON MICROSCOPY	3	120
155	8IDY\|1\|5	human nuclear pre-60S ribosomal particle - State F	ELECTRON MICROSCOPY	3	120
156	8IDT\|1\|5	human nuclear pre-60S ribosomal particle - State G	ELECTRON MICROSCOPY	2.8	120
157	8IR3\|1\|5	human nuclear pre-60S ribosomal particle - State B'	ELECTRON MICROSCOPY	3.5	120
158	8IR1\|1\|W	human nuclear pre-60S ribosomal particle - State A	ELECTRON MICROSCOPY	3.3	120
159	8IE3\|1\|5	human nuclear pre-60S ribosomal particle - State E	ELECTRON MICROSCOPY	3.3	120
160	9G8M\|1\|L7	human 80S ribosome bound by a SKI2-exosome complex	ELECTRON MICROSCOPY	3.3	120
161	8FL4\|1\|L4	Human nuclear pre-60S ribosomal subunit (State I3)	ELECTRON MICROSCOPY	2.89	117
162	8FL3\|1\|L4	Human nuclear pre-60S ribosomal subunit (State I2)	ELECTRON MICROSCOPY	2.53	117
163	8FL2\|1\|L4	Human nuclear pre-60S ribosomal subunit (State I1)	ELECTRON MICROSCOPY	2.67	117
164	9QIW\|1\|L7	Human pre-60S - State 3	ELECTRON MICROSCOPY	3.04	120
165	8RL2\|1\|L7	Human pre-60S - State 5	ELECTRON MICROSCOPY	2.84	120
166	9QER\|1\|L7	Human pre-60S - State 1A	ELECTRON MICROSCOPY	2.9	120
167	9QET\|1\|L7	Human pre-60S - State 1B	ELECTRON MICROSCOPY	3.13	120
168	8FL0\|1\|L4	Human nucleolar pre-60S ribosomal subunit (State H)	ELECTRON MICROSCOPY	2.91	120

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.5_52752.63 Current

Release history

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