#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18A57|1|B (rep)5S ribosomal RNA5S ribosomal RNAListeria monocytogenes EGD-eBacteriaRF00001Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.Electron microscopy2.32022-11-02
28A5I|1|B5S ribosomal RNA5S ribosomal RNAListeria monocytogenes EGD-eBacteriaRF00001Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.Electron microscopy2.32022-11-02
38UUA|1|B5S ribosomal RNA5S Ribosomal RNAListeria innocuaBacteriaRF00001Cryo-EM structure of the Listeria innocua 50S ribosomal subunit in complex with HflXr (structure III)Electron microscopy2.72024-02-28
47NHN|1|B5S ribosomal RNA5S rRNAListeria monocytogenes EGD-eBacteriaRF00001VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenesElectron microscopy2.92021-05-05
58UU4|1|B5S ribosomal RNA5S Ribosomal RNAListeria innocuaBacteriaRF00001Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)Electron microscopy32024-02-28
68UU5|1|B5S ribosomal RNA5S Ribosomal RNAListeria innocuaBacteriaRF00001Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)Electron microscopy32024-02-28
78UU9|1|B5S ribosomal RNA5S Ribosomal RNAListeria innocuaBacteriaRF00001Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)Electron microscopy3.12024-02-28
88UU8|1|B5S ribosomal RNA5S Ribosomal RNAListeria innocuaBacteriaRF00001Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)Electron microscopy3.12024-02-28
98A63|1|B5S ribosomal RNA5S ribosomal RNAListeria monocytogenes EGD-eBacteriaRF00001Cryo-EM structure of Listeria monocytogenes 50S ribosomal subunit.Electron microscopy3.12022-11-02
108UU7|1|B5S ribosomal RNA5S Ribosomal RNAListeria innocuaBacteriaRF00001Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)Electron microscopy3.22024-02-28
118UU6|1|B5S ribosomal RNA5S Ribosomal RNAListeria innocuaBacteriaRF00001Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)Electron microscopy3.32024-02-28

Release history

Release3.3243.3253.3263.3273.3283.3293.3303.3313.332
Date2024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-24

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17NHN|1|BVgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenesELECTRON MICROSCOPY2.9114
28A57|1|BCryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.ELECTRON MICROSCOPY2.3114
38A63|1|BCryo-EM structure of Listeria monocytogenes 50S ribosomal subunit.ELECTRON MICROSCOPY3.1114
48A5I|1|BCryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.ELECTRON MICROSCOPY2.3114
58UU5|1|BCryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)ELECTRON MICROSCOPY3114
68UU4|1|BCryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)ELECTRON MICROSCOPY3114
78UU9|1|BCryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)ELECTRON MICROSCOPY3.1114
88UU8|1|BCryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)ELECTRON MICROSCOPY3.1114
98UUA|1|BCryo-EM structure of the Listeria innocua 50S ribosomal subunit in complex with HflXr (structure III)ELECTRON MICROSCOPY2.7114
108UU6|1|BCryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)ELECTRON MICROSCOPY3.3114
118UU7|1|BCryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)ELECTRON MICROSCOPY3.2114

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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