NR_3.5_64918.18

Members (49)
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#	IFE	Molecule	Organism	Title	Method	Res. Å	Date
1	7SOS\|1\|B (rep)	RNA (5'-R(APAPAPA)-3')	synthetic construct	LaM domain of human LARP1 in complex with AAAA RNA	X-ray diffraction	1.25	2022-08-03
2	6SCE\|1\|B	cyclic oligoadenylate	synthetic construct	Structure of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylate	X-ray diffraction	1.83	2020-02-19
3	6XL1\|1\|C	cA4	synthetic construct	crystal structure of cA4-activated Cad1(D294N)	X-ray diffraction	1.95	2020-12-30
4	8Q42\|1\|X	Cyclic tetraadenosine monophosphate (cA4)	synthetic construct	Crystal structure of cA4-bound Can2 (E341A) in complex with oligo-A DNA	X-ray diffraction	1.97	2023-11-22
5	6SCF\|1\|I	cyclic oligoadenylate	synthetic construct	A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate	X-ray diffraction	1.55	2019-10-30
6	6SCF\|1\|K	cyclic oligoadenylate	synthetic construct	A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate	X-ray diffraction	1.55	2019-10-30
7	6YUD\|1\|K	cyclic tetra-adenylate (cA4)	synthetic construct	Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)	X-ray diffraction	1.84	2020-08-19
8	6YUD\|1\|O	cyclic tetra-adenylate (cA4)	synthetic construct	Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)	X-ray diffraction	1.84	2020-08-19
9	6SCF\|1\|M	cyclic oligoadenylate	synthetic construct	A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate	X-ray diffraction	1.55	2019-10-30
10	6YUD\|1\|P	cyclic tetra-adenylate (cA4)	synthetic construct	Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)	X-ray diffraction	1.84	2020-08-19
11	6SCF\|1\|L	cyclic oligoadenylate	synthetic construct	A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate	X-ray diffraction	1.55	2019-10-30
12	6YUD\|1\|M	cyclic tetra-adenylate (cA4)	synthetic construct	Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)	X-ray diffraction	1.84	2020-08-19
13	6YUD\|1\|Q	cyclic tetra-adenylate (cA4)	synthetic construct	Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)	X-ray diffraction	1.84	2020-08-19
14	8T65\|1\|C	RNA (5'-R(PAPAPAPA)-3')	Nitrosococcus halophilus Nc 4	cA4 bound Cam1	X-ray diffraction	2.09	2024-01-10
15	8Q44\|1\|X	Cyclic tetraadenosine monophosphate (cA4)	synthetic construct	Crystal structure of cA4-bound Can2 (E364R) in complex with oligo-T DNA	X-ray diffraction	2.3	2023-11-22
16	8Q40\|1\|X	Cyclic tetraadenosine monophosphate (cA4)	synthetic construct	Crystal structure of cA4 activated Can2 in complex with a cleaved DNA substrate	X-ray diffraction	2.21	2023-11-22
17	8Q41\|1\|X	Cyclic tetraadenosine monophosphate (cA4)	synthetic construct	Crystal structure of Can2 (E341A) bound to cA4 and TTTAAA ssDNA	X-ray diffraction	2.38	2023-11-22
18	6WXQ\|1\|E	cyclic tetraadenylate	synthetic construct	Crystal structure of CRISPR-associated transcription factor Csa3 complexed with cA4	X-ray diffraction	2.05	2021-11-17
19	8Q43\|1\|X	Cyclic tetraadenosine monophosphate (cA4)	synthetic construct	Crystal structure of cA4-bound Can2 (E341A) in complex with oligo-C DNA	X-ray diffraction	2.28	2023-11-22
20	8BAO\|1\|C	Cyclic tetra-adenylate (cA4)	synthetic construct	Dysgonamonadaceae bacterium CRISPR ancillary nuclease 2	X-ray diffraction	2.06	2022-11-30
21	6W11\|1\|C	cA4	Saccharolobus solfataricus	The structure of Sulfolobus solfataricus Csa3 in complex with cyclic tetraadenylate (cA4)	X-ray diffraction	2.46	2021-03-10
22	6O6X\|1\|D	Cyclic RNA cA4	synthetic construct	Crystal structure of Csm6 W14A/E337A mutant in complex with cA4 by cocrystallization	X-ray diffraction	2.11	2019-07-31
23	4BA2\|1\|R	5'-R(APAPAPAP)-3'	Saccharolobus solfataricus	Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate	X-ray diffraction	2.5	2012-10-03
24	7BDV\|1\|F	cyclic tetra-adenylate	synthetic construct	Structure of Can2 from Sulfobacillus thermosulfidooxidans in complex with cyclic tetra-adenylate (cA4)	X-ray diffraction	2.02	2021-03-03
25	8B0R\|1\|D	RNA (5'-R(PAPAPAPA)-3')	Sulfurihydrogenibium	Structure of the CalpL/cA4 complex	X-ray diffraction	2.2	2022-11-16
26	7BDV\|1\|H	cyclic tetra-adenylate	synthetic construct	Structure of Can2 from Sulfobacillus thermosulfidooxidans in complex with cyclic tetra-adenylate (cA4)	X-ray diffraction	2.02	2021-03-03
27	6O6X\|1\|C	Cyclic RNA cA4	synthetic construct	Crystal structure of Csm6 W14A/E337A mutant in complex with cA4 by cocrystallization	X-ray diffraction	2.11	2019-07-31
28	7DID\|1\|C	RNA (5'-R(APAPAPA)-3')	Mycoplasma genitalium G37	Mycoplasma genitalium RNase R in complex with ribose methylated single-stranded RNA	X-ray diffraction	1.9	2021-03-17
29	8Q3Z\|1\|X	Cyclic tetraadenosine monophosphate (cA4)	synthetic construct	Crystal structure of cA4-bound Can2 from Thermoanaerobacter brockii	X-ray diffraction	3.15	2023-11-22
30	6O7B\|1\|C	Cyclic RNA cA4	synthetic construct	Crystal structure of Csm1-Csm4 cassette in complex with cA4	X-ray diffraction	2.4	2019-07-31
31	6O6V\|1\|C	Cyclic RNA cA4	synthetic construct	Crystal structure of Csm6 in complex with cA4 by soaking cA4 into Csm6	X-ray diffraction	2.35	2019-07-31
32	6WXX\|1\|Y	cA4	synthetic construct	crystal structure of cA4-activated Cad1	X-ray diffraction	3	2020-12-30
33	6WXX\|1\|X	cA4	synthetic construct	crystal structure of cA4-activated Cad1	X-ray diffraction	3	2020-12-30
34	6R7B\|1\|D	RNA (5'-R(PAPAPAPA)-3')	synthetic construct	Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 1	X-ray diffraction	3.12	2019-10-02
35	6R9R\|1\|D	DNA (5'-R(PAPAPAPA)-3')	synthetic construct	Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 2	X-ray diffraction	2.7	2019-10-02
36	8JH1\|1\|C	RNA (5'-R(PAPAPAPA)-3')	synthetic construct	Crystal Structure of the Csm6 Y161A mutant from Thermus thermophilus HB8 in complex with cyclic-tetraadenylate (cA4)	X-ray diffraction	2.89	2023-12-13
37	6OV0\|1\|E	RNA (5'-R(APAPAP(A23))-3')	synthetic construct	Crystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6	X-ray diffraction	2.8	2019-07-31
38	7YGH\|1\|C	RNA (5'-R(PAPAPAPA)-3')	synthetic construct	Crystal Structure of the ring nuclease Sso2081 from Saccharolobus solfataricus in complex with cyclic-tetraadenylate (cA4)	X-ray diffraction	3.11	2023-02-15
39	7YGL\|1\|C	RNA (5'-R(APAPAP(A23))-3')	synthetic construct	Crystal Structure of the ring nuclease Sso2081 from Saccharolobus solfataricus in complex with A4>p cleavage intermediate	X-ray diffraction	2.5	2023-02-15
40	6OV0\|1\|H	RNA (5'-R(APAPAP(A23))-3')	synthetic construct	Crystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6	X-ray diffraction	2.8	2019-07-31
41	6OV0\|1\|G	RNA (5'-R(APAPAP(A23))-3')	synthetic construct	Crystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6	X-ray diffraction	2.8	2019-07-31
42	6O6V\|1\|D	Cyclic RNA cA4	synthetic construct	Crystal structure of Csm6 in complex with cA4 by soaking cA4 into Csm6	X-ray diffraction	2.35	2019-07-31
43	6OV0\|1\|F	RNA (5'-R(APAPAP(A23))-3')	synthetic construct	Crystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6	X-ray diffraction	2.8	2019-07-31
44	6O7B\|1\|D	Cyclic RNA cA4	synthetic construct	Crystal structure of Csm1-Csm4 cassette in complex with cA4	X-ray diffraction	2.4	2019-07-31
45	6R9R\|1\|E	DNA (5'-R(PAPAPAPA)-3')	synthetic construct	Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 2	X-ray diffraction	2.7	2019-10-02
46	6R7B\|1\|E	RNA (5'-R(PAPAPAPA)-3')	synthetic construct	Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 1	X-ray diffraction	3.12	2019-10-02
47	7Z55\|1\|CCC	Cyclic RNA cA4	synthetic construct	Crystal Structure of the Ring Nuclease 0455 from Sulfolobus islandicus (Sis0455) in complex with its substrate	X-ray diffraction	1.664	2022-11-23
48	6O7I\|1\|I	RNA (5'-R(PAPAPAPA)-3')	synthetic construct	Cryo-EM structure of Csm-crRNA-target RNA ternary bigger complex in complex with cA4 in type III-A CRISPR-Cas system	Electron microscopy	3.2	2019-07-31
49	6O7H\|1\|K	Cyclic DNA cA4	synthetic construct	Cryo-EM structure of Csm-crRNA-target RNA ternary complex in complex with cA4 in type III-A CRISPR-Cas system	Electron microscopy	2.9	2019-07-31

Release history

Release	3.317	3.318	3.319	3.320	3.321	3.322	3.323	3.324	3.325	3.326	3.327	3.328	3.329	3.330	3.331	3.332
Date	2024-01-10	2024-01-17	2024-01-24	2024-01-31	2024-02-07	2024-02-14	2024-02-21	2024-02-28	2024-03-06	2024-03-13	2024-03-20	2024-03-27	2024-04-03	2024-04-10	2024-04-17	2024-04-24

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This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

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This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	7DID\|1\|C	Mycoplasma genitalium RNase R in complex with ribose methylated single-stranded RNA	X-RAY DIFFRACTION	1.9	3
2	6O7B\|1\|C	Crystal structure of Csm1-Csm4 cassette in complex with cA4	X-RAY DIFFRACTION	2.4	4
3	6OV0\|1\|E	Crystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6	X-RAY DIFFRACTION	2.8	3
4	6OV0\|1\|H	Crystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6	X-RAY DIFFRACTION	2.8	3
5	8B0R\|1\|D	Structure of the CalpL/cA4 complex	X-RAY DIFFRACTION	2.2	4
6	8BAO\|1\|C	Dysgonamonadaceae bacterium CRISPR ancillary nuclease 2	X-RAY DIFFRACTION	2.06	4
7	7BDV\|1\|F	Structure of Can2 from Sulfobacillus thermosulfidooxidans in complex with cyclic tetra-adenylate (cA4)	X-RAY DIFFRACTION	2.02	4
8	8Q40\|1\|X	Crystal structure of cA4 activated Can2 in complex with a cleaved DNA substrate	X-RAY DIFFRACTION	2.21	4
9	8Q42\|1\|X	Crystal structure of cA4-bound Can2 (E341A) in complex with oligo-A DNA	X-RAY DIFFRACTION	1.97	4
10	8Q44\|1\|X	Crystal structure of cA4-bound Can2 (E364R) in complex with oligo-T DNA	X-RAY DIFFRACTION	2.3	4
11	8Q41\|1\|X	Crystal structure of Can2 (E341A) bound to cA4 and TTTAAA ssDNA	X-RAY DIFFRACTION	2.38	4
12	8Q43\|1\|X	Crystal structure of cA4-bound Can2 (E341A) in complex with oligo-C DNA	X-RAY DIFFRACTION	2.28	4
13	8Q3Z\|1\|X	Crystal structure of cA4-bound Can2 from Thermoanaerobacter brockii	X-RAY DIFFRACTION	3.15	4
14	8JH1\|1\|C	Crystal Structure of the Csm6 Y161A mutant from Thermus thermophilus HB8 in complex with cyclic-tetraadenylate (cA4)	X-RAY DIFFRACTION	2.89	4
15	6WXQ\|1\|E	Crystal structure of CRISPR-associated transcription factor Csa3 complexed with cA4	X-RAY DIFFRACTION	2.05	4
16	8T65\|1\|C	cA4 bound Cam1	X-RAY DIFFRACTION	2.09	4
17	6SCF\|1\|I	A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate	X-RAY DIFFRACTION	1.55	4
18	6SCE\|1\|B	Structure of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylate	X-RAY DIFFRACTION	1.83	4
19	6YUD\|1\|M	Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)	X-RAY DIFFRACTION	1.84	4
20	6YUD\|1\|Q	Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)	X-RAY DIFFRACTION	1.84	4
21	6YUD\|1\|O	Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)	X-RAY DIFFRACTION	1.84	4
22	6YUD\|1\|P	Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)	X-RAY DIFFRACTION	1.84	4
23	6YUD\|1\|K	Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)	X-RAY DIFFRACTION	1.84	4
24	6O6V\|1\|C	Crystal structure of Csm6 in complex with cA4 by soaking cA4 into Csm6	X-RAY DIFFRACTION	2.35	4
25	6O6X\|1\|D	Crystal structure of Csm6 W14A/E337A mutant in complex with cA4 by cocrystallization	X-RAY DIFFRACTION	2.11	4
26	6R9R\|1\|D	Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 2	X-RAY DIFFRACTION	2.7	4
27	6R7B\|1\|D	Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 1	X-RAY DIFFRACTION	3.12	4
28	6O7B\|1\|D	Crystal structure of Csm1-Csm4 cassette in complex with cA4	X-RAY DIFFRACTION	2.4	4
29	6O7H\|1\|K	Cryo-EM structure of Csm-crRNA-target RNA ternary complex in complex with cA4 in type III-A CRISPR-Cas system	ELECTRON MICROSCOPY	2.9	4
30	6O7I\|1\|I	Cryo-EM structure of Csm-crRNA-target RNA ternary bigger complex in complex with cA4 in type III-A CRISPR-Cas system	ELECTRON MICROSCOPY	3.2	4
31	6SCF\|1\|L	A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate	X-RAY DIFFRACTION	1.55	4
32	6SCF\|1\|K	A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate	X-RAY DIFFRACTION	1.55	4
33	6SCF\|1\|M	A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate	X-RAY DIFFRACTION	1.55	4
34	6W11\|1\|C	The structure of Sulfolobus solfataricus Csa3 in complex with cyclic tetraadenylate (cA4)	X-RAY DIFFRACTION	2.46	4
35	7Z55\|1\|CCC	Crystal Structure of the Ring Nuclease 0455 from Sulfolobus islandicus (Sis0455) in complex with its substrate	X-RAY DIFFRACTION	1.664	4
36	6XL1\|1\|C	crystal structure of cA4-activated Cad1(D294N)	X-RAY DIFFRACTION	1.95	4
37	6WXX\|1\|Y	crystal structure of cA4-activated Cad1	X-RAY DIFFRACTION	3	4
38	6WXX\|1\|X	crystal structure of cA4-activated Cad1	X-RAY DIFFRACTION	3	4
39	7BDV\|1\|H	Structure of Can2 from Sulfobacillus thermosulfidooxidans in complex with cyclic tetra-adenylate (cA4)	X-RAY DIFFRACTION	2.02	4
40	6O6X\|1\|C	Crystal structure of Csm6 W14A/E337A mutant in complex with cA4 by cocrystallization	X-RAY DIFFRACTION	2.11	4
41	6O6V\|1\|D	Crystal structure of Csm6 in complex with cA4 by soaking cA4 into Csm6	X-RAY DIFFRACTION	2.35	4
42	7SOS\|1\|B	LaM domain of human LARP1 in complex with AAAA RNA	X-RAY DIFFRACTION	1.25	4
43	4BA2\|1\|R	Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate	X-RAY DIFFRACTION	2.5	4
44	6OV0\|1\|G	Crystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6	X-RAY DIFFRACTION	2.8	2
45	6R9R\|1\|E	Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 2	X-RAY DIFFRACTION	2.7	2
46	7YGL\|1\|C	Crystal Structure of the ring nuclease Sso2081 from Saccharolobus solfataricus in complex with A4>p cleavage intermediate	X-RAY DIFFRACTION	2.5	3
47	6OV0\|1\|F	Crystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6	X-RAY DIFFRACTION	2.8	2
48	7YGH\|1\|C	Crystal Structure of the ring nuclease Sso2081 from Saccharolobus solfataricus in complex with cyclic-tetraadenylate (cA4)	X-RAY DIFFRACTION	3.11	4
49	6R7B\|1\|E	Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 1	X-RAY DIFFRACTION	3.12	2

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.5_64918.18 Obsolete

Release history

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