NR_3.5_65061.61

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	8GLP\|1\|L5+ 8GLP\|1\|L8 (rep)	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)	Electron microscopy	1.67	3702	2023-04-19
2	9TV2\|1\|L5+ 9TV2\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV	Electron microscopy	2.1	3212	2026-07-01
3	9O3W\|1\|L5+ 9O3W\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain	Electron microscopy	1.9	3702	2026-03-04
4	8QYX\|1\|A2+ 8QYX\|1\|C2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 60S ribosomal subunit	Electron microscopy	1.78	3862	2024-12-11
5	8YOO\|1\|L5+ 8YOO\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline	Electron microscopy	2	3826	2024-07-10
6	8QFD\|1\|5+ 8QFD\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	UFL1 E3 ligase bound 60S ribosome	Electron microscopy	2.2	3274	2024-02-21
7	9SPI\|1\|L5+ 9SPI\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE	Electron microscopy	2.4	3562	2026-01-21
8	9C3H\|1\|L5+ 9C3H\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.	Electron microscopy	2	3679	2024-12-04
9	8A3D\|1\|A+ 8A3D\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound	Electron microscopy	1.67	3451	2023-03-08
10	9SPF\|1\|L5+ 9SPF\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE	Electron microscopy	2.4	3622	2026-01-21
11	9O3V\|1\|L5+ 9O3V\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 80S ribosome stalled on MYC nascent chain	Electron microscopy	2.2	3702	2026-03-04
12	9S3D\|1\|L5+ 9S3D\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NAC bound human RNC with 58 amino acid ARF1-linker	Electron microscopy	2.32	3804	2026-02-18
13	9I2D\|1\|L5+ 9I2D\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with 10 amino acid ARF1-linker	Electron microscopy	2.19	3804	2026-02-04
14	9S3B\|1\|L5+ 9S3B\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1	Electron microscopy	2.38	3804	2026-02-18
15	9S3C\|1\|L5+ 9S3C\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2	Electron microscopy	2.42	3804	2026-02-18
16	9QLO\|1\|L5+ 9QLO\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with full length ARF1 - State 1	Electron microscopy	2.47	3804	2026-02-18
17	9PBE\|1\|L5+ 9PBE\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human 80S ribosome (composite map)	Electron microscopy	2.19	3811	2025-12-24
18	8G5Y\|1\|L5+ 8G5Y\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)	Electron microscopy	2.29	3877	2023-04-19
19	9RUC\|1\|L5+ 9RUC\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)	Electron microscopy	2.5	3342	2026-05-13
20	9QLQ\|1\|L5+ 9QLQ\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with full length ARF1 - alternative State	Electron microscopy	2.57	3804	2026-02-18
21	8YOP\|1\|L5+ 8YOP\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with 4 um Tigecycline	Electron microscopy	2.2	3927	2024-07-10
22	9O3Y\|1\|L5+ 9O3Y\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain	Electron microscopy	2.2	3702	2026-03-04
23	9P7D\|1\|L5+ 9P7D\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating class4 80S ribosome	Electron microscopy	2.57	3811	2025-12-24
24	8QOI\|1\|L5+ 8QOI\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA (3773-MER), 5.8S rRNA (156-MER)	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA	Electron microscopy	1.9	3929	2024-06-12
25	9P8B\|1\|L5+ 9P8B\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human eEF1A-A/T-P-E state 80S ribosome	Electron microscopy	2.48	3811	2025-12-24
26	8G5Z\|1\|L5+ 8G5Z\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)	Electron microscopy	2.64	3843	2023-04-19
27	8JDK\|1\|D+ 8JDK\|1\|F	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	Electron microscopy	2.26	3668	2023-12-06
28	9P7E\|1\|L5+ 9P7E\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating class5 80S ribosome	Electron microscopy	2.59	3811	2025-12-24
29	8G60\|1\|L5+ 8G60\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)	Electron microscopy	2.54	3793	2023-04-19
30	9RPV\|1\|M5+ 9RPV\|1\|M8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA of the stalled 80S, 5.8S rRNA of the stalled 80S	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the ZAK-bound human disome	Electron microscopy	2.35	3702	2025-12-10
31	9GUL\|1\|L5+ 9GUL\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex	Electron microscopy	2.2	3823	2025-09-24
32	6ZMI\|1\|L5+ 6ZMI\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex	Electron microscopy	2.6	3929	2020-08-19
33	9FQZ\|1\|L5+ 9FQZ\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, LSU rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1	Electron microscopy	2.85	3630	2026-01-14
34	8XSX\|1\|L5+ 8XSX\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2	Electron microscopy	2.4	3927	2024-07-10
35	9QLP\|1\|L5+ 9QLP\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, RNA (156-MER)	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human RNC with full length ARF1 - State 2	Electron microscopy	2.75	3804	2026-02-18
36	8JDL\|1\|D+ 8JDL\|1\|F	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)	Electron microscopy	2.42	3668	2023-12-06
37	9P73\|1\|L5+ 9P73\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human eEF2-A/P-P/E state 80S ribosome	Electron microscopy	2.66	3811	2025-12-24
38	8JDJ\|1\|D+ 8JDJ\|1\|F	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	Electron microscopy	2.5	3668	2023-12-06
39	7F5S\|1\|L5+ 7F5S\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human delta-METTL18 60S ribosome	Electron microscopy	2.72	3871	2022-06-22
40	8OJ5\|1\|5+ 8OJ5\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	Electron microscopy	2.9	3622	2024-02-21
41	8K2C\|1\|L5+ 8K2C\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with Tigecycline	Electron microscopy	2.4	3927	2024-07-10
42	9P7O\|1\|L5+ 9P7O\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human AT-P-Z state ribosome	Electron microscopy	2.65	3811	2025-12-24
43	9RPV\|1\|L5+ 9RPV\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA of the collided 80S, 5.8S rRNA of the collided 80S	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the ZAK-bound human disome	Electron microscopy	2.35	3739	2025-12-10
44	9RUA\|1\|L5+ 9RUA\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)	Electron microscopy	2.9	3606	2026-06-03
45	9P7Y\|1\|L5+ 9P7Y\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human A-P-E state 80S ribosome	Electron microscopy	2.75	3811	2025-12-24
46	7XNY\|1\|L1+ 7XNY\|1\|L3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells	Electron microscopy	2.5	3929	2023-04-05
47	9P7C\|1\|L5+ 9P7C\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating class3 80S ribosome	Electron microscopy	2.78	3811	2025-12-24
48	8FLE\|1\|L3+ 8FLE\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State L2)	Electron microscopy	2.48	3526	2023-07-12
49	9PA7\|1\|L5+ 9PA7\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human 80S consensus ribosome with EBP1	Electron microscopy	2.67	3811	2025-12-24
50	6ZM7\|1\|L5+ 6ZM7\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex	Electron microscopy	2.7	3929	2020-07-29
51	9P9J\|1\|L5+ 9P9J\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human 60S ribosome	Electron microscopy	2.87	3811	2025-12-24
52	9MNC\|1\|L5+ 9MNC\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 80S ribosome bound to small molecule SW393071	Electron microscopy	2.33	3656	2026-06-24
53	9P7A\|1\|L5+ 9P7A\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human hibernating class2 80S ribosome	Electron microscopy	2.81	3811	2025-12-24
54	9P7X\|1\|L5+ 9P7X\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human A-P-Z state 80S ribosome	Electron microscopy	2.83	3811	2025-12-24
55	9P9I\|1\|L5+ 9P9I\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human unrotated hibernating without CCDC124 state 80S ribosome	Electron microscopy	2.77	3811	2025-12-24
56	8JDM\|1\|D+ 8JDM\|1\|F	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)	Electron microscopy	2.67	3668	2023-12-06
57	7OW7\|1\|A+ 7OW7\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	EIF6-bound large subunit of the human ribosome	Electron microscopy	2.2	3451	2022-10-05
58	7XNX\|1\|L1+ 7XNX\|1\|L3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells	Electron microscopy	2.7	3929	2023-04-05
59	6QZP\|1\|L5+ 6QZP\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA (3773-MER), 5.8S rRNA (156-MER)	Homo sapiens	Eukarya	RF02543 + RF00002	High-resolution cryo-EM structure of the human 80S ribosome	Electron microscopy	2.9	3929	2019-04-24
60	8IFD\|1\|1A+ 8IFD\|1\|1C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Dibekacin-added human 80S ribosome	Electron microscopy	2.59	3873	2024-02-14
61	8FLB\|1\|L3+ 8FLB\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State K2)	Electron microscopy	2.55	3574	2023-07-12
62	8FLD\|1\|L3+ 8FLD\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State L1)	Electron microscopy	2.58	3526	2023-07-12
63	8FL7\|1\|L3+ 8FL7\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State J2)	Electron microscopy	2.55	3563	2023-07-12
64	9P72\|1\|L5+ 9P72\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human P-E state 80S ribosome	Electron microscopy	2.8	3811	2025-12-24
65	9P7K\|1\|L5+ 9P7K\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human post eEF1A-A/T-P-E state 80S ribosome	Electron microscopy	2.8	3811	2025-12-24
66	9P76\|1\|L5+ 9P76\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human eEF1A-A/T-P state 80S ribosome	Electron microscopy	2.83	3811	2025-12-24
67	9P9H\|1\|L5+ 9P9H\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human unrotated hibernating with CCDC124 state 80S ribosome	Electron microscopy	2.84	3811	2025-12-24
68	8OHD\|1\|5+ 8OHD\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)	Electron microscopy	3.1	3622	2024-02-21
69	9P78\|1\|L5+ 9P78\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome	Electron microscopy	2.9	3811	2025-12-24
70	6Y2L\|1\|L5+ 6Y2L\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of human ribosome in POST state	Electron microscopy	3	3769	2020-04-15
71	8G61\|1\|L5+ 8G61\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)	Electron microscopy	2.94	3813	2023-04-19
72	9P7N\|1\|L5+ 9P7N\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Post-eEF1A-A/T-P-Z state 80S ribosome	Electron microscopy	2.83	3811	2025-12-24
73	8IFE\|1\|1A+ 8IFE\|1\|1C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Arbekacin-added human 80S ribosome	Electron microscopy	2.57	3873	2024-02-14
74	9RU9\|1\|L5+ 9RU9\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	23S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)	Electron microscopy	2.97	3679	2026-06-03
75	6Y6X\|1\|L5+ 6Y6X\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Tetracenomycin X bound to the human ribosome	Electron microscopy	2.8	3929	2020-07-08
76	9GMO\|1\|A+ 9GMO\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16	Electron microscopy	2.59	3542	2024-10-02
77	9P7W\|1\|L5+ 9P7W\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human A-P state 80S ribosome	Electron microscopy	2.93	3811	2025-12-24
78	6Z6M\|1\|L5+ 6Z6M\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1	Electron microscopy	3.1	3928	2020-07-29
79	6ZME\|1\|L5+ 6ZME\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex	Electron microscopy	3	3929	2020-08-12
80	9P6Z\|1\|L5+ 9P6Z\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human P-Z state 80S ribosome	Electron microscopy	2.97	3811	2025-12-24
81	9I2E\|1\|L5+ 9I2E\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	NMT1-NAC bound human ribosome (combined translational states)	Electron microscopy	2.95	3928	2026-02-04
82	7QVP\|1\|L5+ 7QVP\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human collided disome (di-ribosome) stalled on XBP1 mRNA	Electron microscopy	3	3767	2022-10-12
83	9RU8\|1\|L5+ 9RU8\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)	Electron microscopy	3	3599	2026-06-03
84	8FL2\|1\|L3+ 8FL2\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State I1)	Electron microscopy	2.67	3649	2023-07-12
85	6ZMO\|1\|L5+ 6ZMO\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex	Electron microscopy	3.1	3929	2020-08-19
86	9P7L\|1\|L5+ 9P7L\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Post-eEF1A-AT-P state 80S ribosome	Electron microscopy	2.92	3811	2025-12-24
87	8FLA\|1\|L3+ 8FLA\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State K1)	Electron microscopy	2.63	3574	2023-07-12
88	9RU7\|1\|L5+ 9RU7\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)	Electron microscopy	3	3527	2026-05-13
89	22TU\|1\|L5+ 22TU\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human 80S ribosome in complex with DHX29	Electron microscopy	3	3775	2026-04-01
90	8FL6\|1\|L3+ 8FL6\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State J1)	Electron microscopy	2.62	3559	2023-07-12
91	9KZU\|1\|L5+ 9KZU\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S_ribosomal_RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3	Electron microscopy	3	3819	2025-12-03
92	8FL3\|1\|L3+ 8FL3\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State I2)	Electron microscopy	2.53	3648	2023-07-12
93	8Y0X\|1\|L5+ 8Y0X\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Dormant ribosome with SERBP1	Electron microscopy	3.3	3814	2024-02-07
94	8Y0W\|1\|L5+ 8Y0W\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	dormant ribosome with eIF5A, eEF2 and SERBP1	Electron microscopy	3.4	3822	2024-02-07
95	9B0P\|1\|L5+ 9B0P\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA [Homo sapiens], 5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating class1 80S ribosome	Electron microscopy	2.82	3896	2025-03-19
96	6LQM\|1\|2+ 6LQM\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of a pre-60S ribosomal subunit - state C	Electron microscopy	3.09	3688	2020-08-26
97	9GY4\|1\|5+ 9GY4\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)	Electron microscopy	3	3676	2025-05-14
98	8IDT\|1\|2+ 8IDT\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State G	Electron microscopy	2.8	3680	2023-08-09
99	9P9K\|1\|L5+ 9P9K\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human 60S ribosome with EIF6	Electron microscopy	2.96	3811	2025-12-24
100	8G6J\|1\|L5+ 8G6J\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)	Electron microscopy	2.8	3843	2023-04-19
101	6Y0G\|1\|L5+ 6Y0G\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of human ribosome in classical-PRE state	Electron microscopy	3.2	3800	2020-04-15
102	9P8H\|1\|L5+ 9P8H\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human A/P-P/E state 80S ribosome	Electron microscopy	2.98	3811	2025-12-24
103	8INF\|1\|2+ 8INF\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State F'	Electron microscopy	3	3808	2023-08-09
104	8FLF\|1\|L3+ 8FLF\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State L3)	Electron microscopy	2.65	3479	2023-07-12
105	9N9J\|1\|L5+ 9N9J\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon	Electron microscopy	3.2	3874	2025-11-19
106	7QVP\|1\|L6+ 7QVP\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human collided disome (di-ribosome) stalled on XBP1 mRNA	Electron microscopy	3	3728	2022-10-12
107	8UKB\|1\|L5+ 8UKB\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosome	Electron microscopy	3.05	3896	2024-11-20
108	9I14\|1\|L5+ 9I14\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, LSU 28S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE	Electron microscopy	3.34	3612	2026-01-28
109	6OM0\|1\|t+ 6OM0\|1\|D	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs	Electron microscopy	3.1	3764	2019-06-19
110	8XSY\|1\|L5+ 8XSY\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)	Electron microscopy	3	3927	2024-07-10
111	8OJ8\|1\|5+ 8OJ8\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)	Electron microscopy	3.3	3663	2024-02-21
112	9G8M\|1\|L5+ 9G8M\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	human 80S ribosome bound by a SKI2-exosome complex	Electron microscopy	3.3	3810	2024-10-23
113	8OJ0\|1\|5+ 8OJ0\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)	Electron microscopy	3.3	3622	2024-02-21
114	6LSR\|1\|2+ 6LSR\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of a pre-60S ribosomal subunit - state B	Electron microscopy	3.13	3637	2020-08-26
115	6OLE\|1\|t+ 6OLE\|1\|D	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs	Electron microscopy	3.1	3764	2019-06-19
116	28LN\|1\|B5+ 28LN\|1\|B8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	XBP1u-stalled RPL4 RNC in complex with NAC	Electron microscopy	2.7	3794	2026-06-10
117	6XA1\|1\|L5+ 6XA1\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of a drug-like compound stalled human translation termination complex	Electron microscopy	2.8	3665	2020-10-07
118	6LU8\|1\|2+ 6LU8\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of a human pre-60S ribosomal subunit - state A	Electron microscopy	3.13	3633	2020-08-26
119	8FKV\|1\|L3+ 8FKV\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State D1)	Electron microscopy	2.47	2365	2023-07-12
120	8FL9\|1\|L3+ 8FL9\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State J3)	Electron microscopy	2.75	3515	2023-07-12
121	8RL2\|1\|L5+ 8RL2\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human pre-60S - State 5	Electron microscopy	2.84	3538	2025-01-15
122	9P8C\|1\|L5+ 9P8C\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating class1 (rotate3) without E tRNA state 80S ribosome	Electron microscopy	3.11	3811	2025-12-24
123	9P79\|1\|L5+ 9P79\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome	Electron microscopy	3.1	3811	2025-12-24
124	8FKW\|1\|L3+ 8FKW\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State D2)	Electron microscopy	2.5	2429	2023-07-12
125	8XSZ\|1\|L5+ 8XSZ\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNA	Electron microscopy	3.2	3824	2024-07-10
126	9KZX\|1\|L5+ 9KZX\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S_ribosomal_RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3	Electron microscopy	3.3	3745	2025-12-03
127	9QIW\|1\|L5+ 9QIW\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human pre-60S - State 3	Electron microscopy	3.04	3293	2025-04-30
128	8IDY\|1\|2+ 8IDY\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State F	Electron microscopy	3	3797	2023-08-09
129	7BHP\|1\|L5+ 7BHP\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of the human Ebp1 - 80S ribosome	Electron microscopy	3.3	3800	2021-02-03
130	8FLC\|1\|L3+ 8FLC\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State K3)	Electron microscopy	2.76	3527	2023-07-12
131	9M0P\|1\|L5+ 9M0P\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA\|HOMO SAPIENS, 5.8S ribosomal RNA\|HOMO SAPIENS	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of human 80S ribosome in complex with montanine	Electron microscopy	2.78	3443	2026-01-14
132	6Y57\|1\|L5+ 6Y57\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of human ribosome in hybrid-PRE state	Electron microscopy	3.5	3730	2020-04-15
133	8INE\|1\|2+ 8INE\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State G'	Electron microscopy	3.2	3692	2023-08-09
134	6LSS\|1\|2+ 6LSS\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of a pre-60S ribosomal subunit - state preA	Electron microscopy	3.23	3630	2020-08-26
135	8FKY\|1\|L3+ 8FKY\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State F)	Electron microscopy	2.67	2740	2023-07-12
136	8FKX\|1\|L3+ 8FKX\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State E)	Electron microscopy	2.59	2402	2023-07-12
137	9B0Q\|1\|l5+ 9B0Q\|1\|l8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA [Homo sapiens], RNA (156-MER)5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human top-back di-ribosome structure (Composite map)	Electron microscopy	3.2	3864	2025-03-19
138	9PKG\|1\|L5+ 9PKG\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human P state 80S ribosome	Electron microscopy	3.26	3811	2025-12-24
139	8IPY\|1\|2+ 8IPY\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State D'	Electron microscopy	3.2	3641	2023-08-09
140	8INK\|1\|2+ 8INK\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State D	Electron microscopy	3.2	3651	2023-08-09
141	9Y4G\|1\|A6+ 9Y4G\|1\|A5+ 9Y4G\|1\|A8	Large subunit ribosomal RNA + Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA (157-MER), LSU-alpha rRNA, LSU-beta rRNA (2108-MER)	Ctenomyidae	Eukaryota	RF02543 + RF02543 + RF00002	Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)	Electron microscopy	3.3	3992	2026-02-18
142	8FL4\|1\|L3+ 8FL4\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nuclear pre-60S ribosomal subunit (State I3)	Electron microscopy	2.89	3640	2023-07-12
143	9B0Q\|1\|L5+ 9B0Q\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA [Homo sapiens], RNA (156-MER)5.8S rRNA [Homo sapiens]	Homo sapiens	Eukarya	RF02543 + RF00002	In situ human top-back di-ribosome structure (Composite map)	Electron microscopy	3.2	3864	2025-03-19
144	8IPD\|1\|2+ 8IPD\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State C	Electron microscopy	3.2	3641	2023-08-09
145	8FKQ\|1\|L3+ 8FKQ\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State A2)	Electron microscopy	2.76	1715	2023-07-12
146	8FKU\|1\|L3+ 8FKU\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State C2)	Electron microscopy	2.82	2337	2023-07-12
147	8FKS\|1\|L3+ 8FKS\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State B2)	Electron microscopy	2.88	1976	2023-07-12
148	8FKT\|1\|L3+ 8FKT\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State C1)	Electron microscopy	2.81	2277	2023-07-12
149	6OLI\|1\|t+ 6OLI\|1\|D	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)	Electron microscopy	3.5	3764	2019-06-19
150	8FKR\|1\|L3+ 8FKR\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State B1)	Electron microscopy	2.89	1921	2023-07-12
151	8IE3\|1\|2+ 8IE3\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State E	Electron microscopy	3.3	3675	2023-08-09
152	9Y49\|1\|A6+ 9Y49\|1\|A5+ 9Y49\|1\|A8	Large subunit ribosomal RNA + Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA (157-MER), LSU-alpha rRNA (1722-MER), LSU-beta rRNA (2069-MER)	Ctenomyidae	Eukaryota	RF02543 + RF02543 + RF00002	Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)	Electron microscopy	3.4	3941	2026-02-18
153	8ONY\|1\|5	Large subunit ribosomal RNA	28S rRNA	Homo sapiens	Eukarya	RF02543	Human Methionine Aminopeptidase 2 at the 80S ribosome	Electron microscopy	2.92	156	2024-02-21
154	8FKP\|1\|L3+ 8FKP\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State A1)	Electron microscopy	2.85	1659	2023-07-12
155	8IR1\|1\|2+ 8IR1\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRMA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State A	Electron microscopy	3.3	3524	2023-08-09
156	8IR3\|1\|2+ 8IR3\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	human nuclear pre-60S ribosomal particle - State B'	Electron microscopy	3.5	3696	2023-08-09
157	6OLG\|1\|A2+ 6OLG\|1\|A3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)	Electron microscopy	3.4	3769	2019-06-19
158	8FKZ\|1\|L3+ 8FKZ\|1\|L1	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Human nucleolar pre-60S ribosomal subunit (State G)	Electron microscopy	3.04	2987	2023-07-12
159	8FL0\|1\|L3	Large subunit ribosomal RNA	28S rRNA	Homo sapiens	Eukarya	RF02543	Human nucleolar pre-60S ribosomal subunit (State H)	Electron microscopy	2.91	1558	2023-07-12
160	6SXO\|1\|L5	Large subunit ribosomal RNA	28S ribosomal RNA including ES27L-B (2839-3265)	Homo sapiens	Eukarya	RF02543	Cryo-EM structure of the human Ebp1-ribosome complex	Electron microscopy	3.3	268	2020-02-19
161	6Z6N\|1\|L5+ 6Z6N\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)	Electron microscopy	2.9	3928	2020-07-29
162	6Z6L\|1\|L5+ 6Z6L\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo-EM structure of human CCDC124 bound to 80S ribosomes	Electron microscopy	3	3928	2020-07-29
163	5AJ0\|1\|A2+ 5AJ0\|1\|A3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Homo sapiens	Eukarya	RF02543 + RF00002	Cryo electron microscopy of actively translating human polysomes (POST state).	Electron microscopy	3.5	3769	2015-05-20
164	9RG7\|1\|L5+ 9RG7\|1\|L8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Homo sapiens	Eukarya	RF02543 + RF00002	In vitro reconstituted NAA40-NAC bound 80S	Electron microscopy	2.72	3825	2026-06-17

Release history

Release	4.46
Date	2026-07-01

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	9Y49\|1\|A6+ 9Y49\|1\|A5+ 9Y49\|1\|A8	Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)	ELECTRON MICROSCOPY	3.4	3941
2	9Y4G\|1\|A6+ 9Y4G\|1\|A5+ 9Y4G\|1\|A8	Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)	ELECTRON MICROSCOPY	3.3	3992
3	9B0Q\|1\|L5+ 9B0Q\|1\|L8	In situ human top-back di-ribosome structure (Composite map)	ELECTRON MICROSCOPY	3.2	3864
4	7OW7\|1\|A+ 7OW7\|1\|C	EIF6-bound large subunit of the human ribosome	ELECTRON MICROSCOPY	2.2	3451
5	8A3D\|1\|A+ 8A3D\|1\|C	Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound	ELECTRON MICROSCOPY	1.67	3451
6	8QOI\|1\|L5+ 8QOI\|1\|L8	Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA	ELECTRON MICROSCOPY	1.9	3929
7	7F5S\|1\|L5+ 7F5S\|1\|L8	human delta-METTL18 60S ribosome	ELECTRON MICROSCOPY	2.72	3871
8	8G60\|1\|L5+ 8G60\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)	ELECTRON MICROSCOPY	2.54	3793
9	8GLP\|1\|L5+ 8GLP\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)	ELECTRON MICROSCOPY	1.67	3702
10	8G5Y\|1\|L5+ 8G5Y\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)	ELECTRON MICROSCOPY	2.29	3877
11	9RU9\|1\|L5+ 9RU9\|1\|L8	RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)	ELECTRON MICROSCOPY	2.97	3679
12	9RPV\|1\|M5+ 9RPV\|1\|M8	Structure of the ZAK-bound human disome	ELECTRON MICROSCOPY	2.35	3702
13	8G61\|1\|L5+ 8G61\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)	ELECTRON MICROSCOPY	2.94	3813
14	9RUC\|1\|L5+ 9RUC\|1\|L8	WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)	ELECTRON MICROSCOPY	2.5	3342
15	8G6J\|1\|L5+ 8G6J\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)	ELECTRON MICROSCOPY	2.8	3843
16	8G5Z\|1\|L5+ 8G5Z\|1\|L8	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)	ELECTRON MICROSCOPY	2.64	3843
17	9O3W\|1\|L5+ 9O3W\|1\|L8	Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain	ELECTRON MICROSCOPY	1.9	3702
18	9O3Y\|1\|L5+ 9O3Y\|1\|L8	Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain	ELECTRON MICROSCOPY	2.2	3702
19	9O3V\|1\|L5+ 9O3V\|1\|L8	Human 80S ribosome stalled on MYC nascent chain	ELECTRON MICROSCOPY	2.2	3702
20	9SPF\|1\|L5+ 9SPF\|1\|L8	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE	ELECTRON MICROSCOPY	2.4	3622
21	9SPI\|1\|L5+ 9SPI\|1\|L8	CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE	ELECTRON MICROSCOPY	2.4	3562
22	8IFD\|1\|1A+ 8IFD\|1\|1C	Dibekacin-added human 80S ribosome	ELECTRON MICROSCOPY	2.59	3873
23	8IFE\|1\|1A+ 8IFE\|1\|1C	Arbekacin-added human 80S ribosome	ELECTRON MICROSCOPY	2.57	3873
24	9KZU\|1\|L5+ 9KZU\|1\|L8	Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3	ELECTRON MICROSCOPY	3	3819
25	7BHP\|1\|L5+ 7BHP\|1\|L8	Cryo-EM structure of the human Ebp1 - 80S ribosome	ELECTRON MICROSCOPY	3.3	3800
26	8XSX\|1\|L5+ 8XSX\|1\|L8	Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2	ELECTRON MICROSCOPY	2.4	3927
27	8XSZ\|1\|L5+ 8XSZ\|1\|L8	Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNA	ELECTRON MICROSCOPY	3.2	3824
28	8XSY\|1\|L5+ 8XSY\|1\|L8	Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)	ELECTRON MICROSCOPY	3	3927
29	8K2C\|1\|L5+ 8K2C\|1\|L8	Cryo-EM structure of the human 80S ribosome with Tigecycline	ELECTRON MICROSCOPY	2.4	3927
30	8YOP\|1\|L5+ 8YOP\|1\|L8	Cryo-EM structure of the human 80S ribosome with 4 um Tigecycline	ELECTRON MICROSCOPY	2.2	3927
31	9RG7\|1\|L5+ 9RG7\|1\|L8	In vitro reconstituted NAA40-NAC bound 80S	ELECTRON MICROSCOPY	2.72	3825
32	8YOO\|1\|L5+ 8YOO\|1\|L8	Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline	ELECTRON MICROSCOPY	2	3826
33	9MNC\|1\|L5+ 9MNC\|1\|L1	Human 80S ribosome bound to small molecule SW393071	ELECTRON MICROSCOPY	2.33	3656
34	9C3H\|1\|L5+ 9C3H\|1\|L1	Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.	ELECTRON MICROSCOPY	2	3679
35	9I2D\|1\|L5+ 9I2D\|1\|L8	NMT1-NAC bound human RNC with 10 amino acid ARF1-linker	ELECTRON MICROSCOPY	2.19	3804
36	9S3B\|1\|L5+ 9S3B\|1\|L8	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1	ELECTRON MICROSCOPY	2.38	3804
37	9S3C\|1\|L5+ 9S3C\|1\|L8	NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2	ELECTRON MICROSCOPY	2.42	3804
38	9S3D\|1\|L5+ 9S3D\|1\|L8	NAC bound human RNC with 58 amino acid ARF1-linker	ELECTRON MICROSCOPY	2.32	3804
39	9QLQ\|1\|L5+ 9QLQ\|1\|L8	NMT1-NAC bound human RNC with full length ARF1 - alternative State	ELECTRON MICROSCOPY	2.57	3804
40	9QLO\|1\|L5+ 9QLO\|1\|L8	NMT1-NAC bound human RNC with full length ARF1 - State 1	ELECTRON MICROSCOPY	2.47	3804
41	9QLP\|1\|L5+ 9QLP\|1\|L8	NMT1-NAC bound human RNC with full length ARF1 - State 2	ELECTRON MICROSCOPY	2.75	3804
42	6Y2L\|1\|L5+ 6Y2L\|1\|L8	Structure of human ribosome in POST state	ELECTRON MICROSCOPY	3	3769
43	7QVP\|1\|L5+ 7QVP\|1\|L8	Human collided disome (di-ribosome) stalled on XBP1 mRNA	ELECTRON MICROSCOPY	3	3767
44	22TU\|1\|L5+ 22TU\|1\|L8	Human 80S ribosome in complex with DHX29	ELECTRON MICROSCOPY	3	3775
45	6Y0G\|1\|L5+ 6Y0G\|1\|L8	Structure of human ribosome in classical-PRE state	ELECTRON MICROSCOPY	3.2	3800
46	9P79\|1\|L5+ 9P79\|1\|L8	In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome	ELECTRON MICROSCOPY	3.1	3811
47	9P7X\|1\|L5+ 9P7X\|1\|L8	In situ human A-P-Z state 80S ribosome	ELECTRON MICROSCOPY	2.83	3811
48	9P7O\|1\|L5+ 9P7O\|1\|L8	In situ human AT-P-Z state ribosome	ELECTRON MICROSCOPY	2.65	3811
49	9P7N\|1\|L5+ 9P7N\|1\|L8	In situ human Post-eEF1A-A/T-P-Z state 80S ribosome	ELECTRON MICROSCOPY	2.83	3811
50	9P6Z\|1\|L5+ 9P6Z\|1\|L8	In situ human P-Z state 80S ribosome	ELECTRON MICROSCOPY	2.97	3811
51	9FQZ\|1\|L5+ 9FQZ\|1\|L8	CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1	ELECTRON MICROSCOPY	2.85	3630
52	9P8C\|1\|L5+ 9P8C\|1\|L8	In situ human Hibernating class1 (rotate3) without E tRNA state 80S ribosome	ELECTRON MICROSCOPY	3.11	3811
53	9P7W\|1\|L5+ 9P7W\|1\|L8	In situ human A-P state 80S ribosome	ELECTRON MICROSCOPY	2.93	3811
54	9P7Y\|1\|L5+ 9P7Y\|1\|L8	In situ human A-P-E state 80S ribosome	ELECTRON MICROSCOPY	2.75	3811
55	9P9K\|1\|L5+ 9P9K\|1\|L8	In situ human 60S ribosome with EIF6	ELECTRON MICROSCOPY	2.96	3811
56	9P9J\|1\|L5+ 9P9J\|1\|L8	In situ human 60S ribosome	ELECTRON MICROSCOPY	2.87	3811
57	9PKG\|1\|L5+ 9PKG\|1\|L8	In situ human P state 80S ribosome	ELECTRON MICROSCOPY	3.26	3811
58	9P7L\|1\|L5+ 9P7L\|1\|L8	In situ human Post-eEF1A-AT-P state 80S ribosome	ELECTRON MICROSCOPY	2.92	3811
59	9P76\|1\|L5+ 9P76\|1\|L8	In situ human eEF1A-A/T-P state 80S ribosome	ELECTRON MICROSCOPY	2.83	3811
60	9P72\|1\|L5+ 9P72\|1\|L8	In situ human P-E state 80S ribosome	ELECTRON MICROSCOPY	2.8	3811
61	9P7K\|1\|L5+ 9P7K\|1\|L8	In situ human post eEF1A-A/T-P-E state 80S ribosome	ELECTRON MICROSCOPY	2.8	3811
62	9P8B\|1\|L5+ 9P8B\|1\|L8	In situ human eEF1A-A/T-P-E state 80S ribosome	ELECTRON MICROSCOPY	2.48	3811
63	9P9I\|1\|L5+ 9P9I\|1\|L8	In situ human unrotated hibernating without CCDC124 state 80S ribosome	ELECTRON MICROSCOPY	2.77	3811
64	9P9H\|1\|L5+ 9P9H\|1\|L8	In situ human unrotated hibernating with CCDC124 state 80S ribosome	ELECTRON MICROSCOPY	2.84	3811
65	9PA7\|1\|L5+ 9PA7\|1\|L8	In situ human 80S consensus ribosome with EBP1	ELECTRON MICROSCOPY	2.67	3811
66	9PBE\|1\|L5+ 9PBE\|1\|L8	In situ human 80S ribosome (composite map)	ELECTRON MICROSCOPY	2.19	3811
67	9P78\|1\|L5+ 9P78\|1\|L8	In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome	ELECTRON MICROSCOPY	2.9	3811
68	9P7A\|1\|L5+ 9P7A\|1\|L8	In situ human hibernating class2 80S ribosome	ELECTRON MICROSCOPY	2.81	3811
69	9P7C\|1\|L5+ 9P7C\|1\|L8	In situ human Hibernating class3 80S ribosome	ELECTRON MICROSCOPY	2.78	3811
70	9P7D\|1\|L5+ 9P7D\|1\|L8	In situ human Hibernating class4 80S ribosome	ELECTRON MICROSCOPY	2.57	3811
71	9P7E\|1\|L5+ 9P7E\|1\|L8	In situ human Hibernating class5 80S ribosome	ELECTRON MICROSCOPY	2.59	3811
72	9P73\|1\|L5+ 9P73\|1\|L8	In situ human eEF2-A/P-P/E state 80S ribosome	ELECTRON MICROSCOPY	2.66	3811
73	9P8H\|1\|L5+ 9P8H\|1\|L8	In situ human A/P-P/E state 80S ribosome	ELECTRON MICROSCOPY	2.98	3811
74	9B0Q\|1\|l5+ 9B0Q\|1\|l8	In situ human top-back di-ribosome structure (Composite map)	ELECTRON MICROSCOPY	3.2	3864
75	8UKB\|1\|L5+ 8UKB\|1\|L8	In situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosome	ELECTRON MICROSCOPY	3.05	3896
76	9B0P\|1\|L5+ 9B0P\|1\|L8	In situ human Hibernating class1 80S ribosome	ELECTRON MICROSCOPY	2.82	3896
77	9I2E\|1\|L5+ 9I2E\|1\|L8	NMT1-NAC bound human ribosome (combined translational states)	ELECTRON MICROSCOPY	2.95	3928
78	6Z6M\|1\|L5+ 6Z6M\|1\|L8	Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1	ELECTRON MICROSCOPY	3.1	3928
79	8Y0X\|1\|L5+ 8Y0X\|1\|L8	Dormant ribosome with SERBP1	ELECTRON MICROSCOPY	3.3	3814
80	8Y0W\|1\|L5+ 8Y0W\|1\|L8	dormant ribosome with eIF5A, eEF2 and SERBP1	ELECTRON MICROSCOPY	3.4	3822
81	6ZME\|1\|L5+ 6ZME\|1\|L8	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex	ELECTRON MICROSCOPY	3	3929
82	6ZMO\|1\|L5+ 6ZMO\|1\|L8	SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex	ELECTRON MICROSCOPY	3.1	3929
83	6ZMI\|1\|L5+ 6ZMI\|1\|L8	SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex	ELECTRON MICROSCOPY	2.6	3929
84	6ZM7\|1\|L5+ 6ZM7\|1\|L8	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex	ELECTRON MICROSCOPY	2.7	3929
85	6Z6L\|1\|L5+ 6Z6L\|1\|L8	Cryo-EM structure of human CCDC124 bound to 80S ribosomes	ELECTRON MICROSCOPY	3	3928
86	6Z6N\|1\|L5+ 6Z6N\|1\|L8	Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)	ELECTRON MICROSCOPY	2.9	3928
87	6Y6X\|1\|L5+ 6Y6X\|1\|L8	Tetracenomycin X bound to the human ribosome	ELECTRON MICROSCOPY	2.8	3929
88	6QZP\|1\|L5+ 6QZP\|1\|L8	High-resolution cryo-EM structure of the human 80S ribosome	ELECTRON MICROSCOPY	2.9	3929
89	7XNX\|1\|L1+ 7XNX\|1\|L3	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells	ELECTRON MICROSCOPY	2.7	3929
90	7XNY\|1\|L1+ 7XNY\|1\|L3	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells	ELECTRON MICROSCOPY	2.5	3929
91	9I14\|1\|L5+ 9I14\|1\|L8	CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE	ELECTRON MICROSCOPY	3.34	3612
92	9RPV\|1\|L5+ 9RPV\|1\|L8	Structure of the ZAK-bound human disome	ELECTRON MICROSCOPY	2.35	3739
93	6Y57\|1\|L5+ 6Y57\|1\|L8	Structure of human ribosome in hybrid-PRE state	ELECTRON MICROSCOPY	3.5	3730
94	7QVP\|1\|L6+ 7QVP\|1\|L1	Human collided disome (di-ribosome) stalled on XBP1 mRNA	ELECTRON MICROSCOPY	3	3728
95	9KZX\|1\|L5+ 9KZX\|1\|L8	Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3	ELECTRON MICROSCOPY	3.3	3745
96	9GUL\|1\|L5+ 9GUL\|1\|L8	Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex	ELECTRON MICROSCOPY	2.2	3823
97	9N9J\|1\|L5+ 9N9J\|1\|L8	Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon	ELECTRON MICROSCOPY	3.2	3874
98	8JDM\|1\|D+ 8JDM\|1\|F	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)	ELECTRON MICROSCOPY	2.67	3668
99	8JDK\|1\|D+ 8JDK\|1\|F	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.26	3668
100	8JDJ\|1\|D+ 8JDJ\|1\|F	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)	ELECTRON MICROSCOPY	2.5	3668
101	8JDL\|1\|D+ 8JDL\|1\|F	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)	ELECTRON MICROSCOPY	2.42	3668
102	8QFD\|1\|5+ 8QFD\|1\|8	UFL1 E3 ligase bound 60S ribosome	ELECTRON MICROSCOPY	2.2	3274
103	9RU7\|1\|L5+ 9RU7\|1\|L8	WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)	ELECTRON MICROSCOPY	3	3527
104	9RU8\|1\|L5+ 9RU8\|1\|L8	WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)	ELECTRON MICROSCOPY	3	3599
105	9RUA\|1\|L5+ 9RUA\|1\|L8	RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)	ELECTRON MICROSCOPY	2.9	3606
106	8OJ5\|1\|5+ 8OJ5\|1\|8	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	ELECTRON MICROSCOPY	2.9	3622
107	8OHD\|1\|5+ 8OHD\|1\|8	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)	ELECTRON MICROSCOPY	3.1	3622
108	8OJ8\|1\|5+ 8OJ8\|1\|8	60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)	ELECTRON MICROSCOPY	3.3	3663
109	8OJ0\|1\|5+ 8OJ0\|1\|8	60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)	ELECTRON MICROSCOPY	3.3	3622
110	9GY4\|1\|5+ 9GY4\|1\|8	60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)	ELECTRON MICROSCOPY	3	3676
111	9GMO\|1\|A+ 9GMO\|1\|C	eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16	ELECTRON MICROSCOPY	2.59	3542
112	6XA1\|1\|L5+ 6XA1\|1\|L8	Structure of a drug-like compound stalled human translation termination complex	ELECTRON MICROSCOPY	2.8	3665
113	6LSR\|1\|2+ 6LSR\|1\|8	Cryo-EM structure of a pre-60S ribosomal subunit - state B	ELECTRON MICROSCOPY	3.13	3637
114	6LQM\|1\|2+ 6LQM\|1\|8	Cryo-EM structure of a pre-60S ribosomal subunit - state C	ELECTRON MICROSCOPY	3.09	3688
115	8QYX\|1\|A2+ 8QYX\|1\|C2	Human 60S ribosomal subunit	ELECTRON MICROSCOPY	1.78	3862
116	28LN\|1\|B5+ 28LN\|1\|B8	XBP1u-stalled RPL4 RNC in complex with NAC	ELECTRON MICROSCOPY	2.7	3794
117	9TV2\|1\|L5+ 9TV2\|1\|L8	80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV	ELECTRON MICROSCOPY	2.1	3212
118	6OLG\|1\|A2+ 6OLG\|1\|A3	Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)	ELECTRON MICROSCOPY	3.4	3769
119	5AJ0\|1\|A2+ 5AJ0\|1\|A3	Cryo electron microscopy of actively translating human polysomes (POST state).	ELECTRON MICROSCOPY	3.5	3769
120	6OM0\|1\|t+ 6OM0\|1\|D	Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs	ELECTRON MICROSCOPY	3.1	3764
121	6OLE\|1\|t+ 6OLE\|1\|D	Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs	ELECTRON MICROSCOPY	3.1	3764
122	6OLI\|1\|t+ 6OLI\|1\|D	Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)	ELECTRON MICROSCOPY	3.5	3764
123	9M0P\|1\|L5+ 9M0P\|1\|L8	Cryo-EM structure of human 80S ribosome in complex with montanine	ELECTRON MICROSCOPY	2.78	3443
124	9G8M\|1\|L5+ 9G8M\|1\|L8	human 80S ribosome bound by a SKI2-exosome complex	ELECTRON MICROSCOPY	3.3	3810
125	8FLF\|1\|L3+ 8FLF\|1\|L1	Human nuclear pre-60S ribosomal subunit (State L3)	ELECTRON MICROSCOPY	2.65	3479
126	8FLE\|1\|L3+ 8FLE\|1\|L1	Human nuclear pre-60S ribosomal subunit (State L2)	ELECTRON MICROSCOPY	2.48	3526
127	8FLD\|1\|L3+ 8FLD\|1\|L1	Human nuclear pre-60S ribosomal subunit (State L1)	ELECTRON MICROSCOPY	2.58	3526
128	8FL6\|1\|L3+ 8FL6\|1\|L1	Human nuclear pre-60S ribosomal subunit (State J1)	ELECTRON MICROSCOPY	2.62	3559
129	8FL7\|1\|L3+ 8FL7\|1\|L1	Human nuclear pre-60S ribosomal subunit (State J2)	ELECTRON MICROSCOPY	2.55	3563
130	8FLA\|1\|L3+ 8FLA\|1\|L1	Human nuclear pre-60S ribosomal subunit (State K1)	ELECTRON MICROSCOPY	2.63	3574
131	8FLB\|1\|L3+ 8FLB\|1\|L1	Human nuclear pre-60S ribosomal subunit (State K2)	ELECTRON MICROSCOPY	2.55	3574
132	8FL9\|1\|L3+ 8FL9\|1\|L1	Human nuclear pre-60S ribosomal subunit (State J3)	ELECTRON MICROSCOPY	2.75	3515
133	8FLC\|1\|L3+ 8FLC\|1\|L1	Human nuclear pre-60S ribosomal subunit (State K3)	ELECTRON MICROSCOPY	2.76	3527
134	6LU8\|1\|2+ 6LU8\|1\|8	Cryo-EM structure of a human pre-60S ribosomal subunit - state A	ELECTRON MICROSCOPY	3.13	3633
135	6LSS\|1\|2+ 6LSS\|1\|8	Cryo-EM structure of a pre-60S ribosomal subunit - state preA	ELECTRON MICROSCOPY	3.23	3630
136	8IDT\|1\|2+ 8IDT\|1\|8	human nuclear pre-60S ribosomal particle - State G	ELECTRON MICROSCOPY	2.8	3680
137	8IDY\|1\|2+ 8IDY\|1\|8	human nuclear pre-60S ribosomal particle - State F	ELECTRON MICROSCOPY	3	3797
138	8IE3\|1\|2+ 8IE3\|1\|8	human nuclear pre-60S ribosomal particle - State E	ELECTRON MICROSCOPY	3.3	3675
139	8INE\|1\|2+ 8INE\|1\|8	human nuclear pre-60S ribosomal particle - State G'	ELECTRON MICROSCOPY	3.2	3692
140	8INF\|1\|2+ 8INF\|1\|8	human nuclear pre-60S ribosomal particle - State F'	ELECTRON MICROSCOPY	3	3808
141	8IPD\|1\|2+ 8IPD\|1\|8	human nuclear pre-60S ribosomal particle - State C	ELECTRON MICROSCOPY	3.2	3641
142	8INK\|1\|2+ 8INK\|1\|8	human nuclear pre-60S ribosomal particle - State D	ELECTRON MICROSCOPY	3.2	3651
143	8IPY\|1\|2+ 8IPY\|1\|8	human nuclear pre-60S ribosomal particle - State D'	ELECTRON MICROSCOPY	3.2	3641
144	8FL4\|1\|L3+ 8FL4\|1\|L1	Human nuclear pre-60S ribosomal subunit (State I3)	ELECTRON MICROSCOPY	2.89	3640
145	8FL3\|1\|L3+ 8FL3\|1\|L1	Human nuclear pre-60S ribosomal subunit (State I2)	ELECTRON MICROSCOPY	2.53	3648
146	8FL2\|1\|L3+ 8FL2\|1\|L1	Human nuclear pre-60S ribosomal subunit (State I1)	ELECTRON MICROSCOPY	2.67	3649
147	8FKZ\|1\|L3+ 8FKZ\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State G)	ELECTRON MICROSCOPY	3.04	2987
148	8FL0\|1\|L3	Human nucleolar pre-60S ribosomal subunit (State H)	ELECTRON MICROSCOPY	2.91	1558
149	9QIW\|1\|L5+ 9QIW\|1\|L8	Human pre-60S - State 3	ELECTRON MICROSCOPY	3.04	3293
150	8RL2\|1\|L5+ 8RL2\|1\|L8	Human pre-60S - State 5	ELECTRON MICROSCOPY	2.84	3538
151	8IR1\|1\|2+ 8IR1\|1\|8	human nuclear pre-60S ribosomal particle - State A	ELECTRON MICROSCOPY	3.3	3524
152	8IR3\|1\|2+ 8IR3\|1\|8	human nuclear pre-60S ribosomal particle - State B'	ELECTRON MICROSCOPY	3.5	3696
153	8FKS\|1\|L3+ 8FKS\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State B2)	ELECTRON MICROSCOPY	2.88	1976
154	8FKQ\|1\|L3+ 8FKQ\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State A2)	ELECTRON MICROSCOPY	2.76	1715
155	8FKP\|1\|L3+ 8FKP\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State A1)	ELECTRON MICROSCOPY	2.85	1659
156	8FKR\|1\|L3+ 8FKR\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State B1)	ELECTRON MICROSCOPY	2.89	1921
157	8FKV\|1\|L3+ 8FKV\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State D1)	ELECTRON MICROSCOPY	2.47	2365
158	8FKT\|1\|L3+ 8FKT\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State C1)	ELECTRON MICROSCOPY	2.81	2277
159	8FKY\|1\|L3+ 8FKY\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State F)	ELECTRON MICROSCOPY	2.67	2740
160	8FKX\|1\|L3+ 8FKX\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State E)	ELECTRON MICROSCOPY	2.59	2402
161	8FKW\|1\|L3+ 8FKW\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State D2)	ELECTRON MICROSCOPY	2.5	2429
162	8FKU\|1\|L3+ 8FKU\|1\|L1	Human nucleolar pre-60S ribosomal subunit (State C2)	ELECTRON MICROSCOPY	2.82	2337
163	6SXO\|1\|L5	Cryo-EM structure of the human Ebp1-ribosome complex	ELECTRON MICROSCOPY	3.3	268
164	8ONY\|1\|5	Human Methionine Aminopeptidase 2 at the 80S ribosome	ELECTRON MICROSCOPY	2.92	156

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.5_65061.61 Current

Release history

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