Equivalence class NR_3.5_76503.2 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 7UOB|1|T+ 7UOB|1|P (rep) | Product RNA (35-MER), Template RNA (55-MER) | synthetic construct | SARS-CoV-2 replication-transcription complex bound to GTP, in a pre-catalytic state | Electron microscopy | 2.68 | 2022-11-30 | |||
2 | 7UOE|1|T+ 7UOE|1|P | Product RNA (35-MER), Template RNA (55-MER) | synthetic construct | SARS-CoV-2 replication-transcription complex bound to CTP, in a pre-catalytic state | Electron microscopy | 2.67 | 2022-11-30 | |||
3 | 8SQ9|1|T+ 8SQ9|1|P | Primer RNA, Template RNA | Severe acute respiratory syndrome coronavirus | SARS-CoV-2 replication-transcription complex bound to nsp9 and UMPCPP, as a pre-catalytic NMPylation intermediate | Electron microscopy | 2.9 | 2023-11-22 | |||
4 | 7UO9|1|T+ 7UO9|1|P | Product RNA (35-MER), Template RNA (55-MER) | synthetic construct | SARS-CoV-2 replication-transcription complex bound to UTP, in a pre-catalytic state | Electron microscopy | 3.13 | 2022-11-30 |
Release history
Release | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_3.5_76503.2 | NR_3.5_76503.1 | 3.310 | (3) 7UO9|1|T+7UO9|1|P, 7UOB|1|T+7UOB|1|P, 7UOE|1|T+7UOE|1|P | (1) 8SQ9|1|T+8SQ9|1|P | (0) |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
#S | View | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|---|
1 | 7UOE|1|T+ 7UOE|1|P | SARS-CoV-2 replication-transcription complex bound to CTP, in a pre-catalytic state | ELECTRON MICROSCOPY | 2.67 | 37 | |
2 | 7UOB|1|T+ 7UOB|1|P | SARS-CoV-2 replication-transcription complex bound to GTP, in a pre-catalytic state | ELECTRON MICROSCOPY | 2.68 | 36 | |
3 | 7UO9|1|T+ 7UO9|1|P | SARS-CoV-2 replication-transcription complex bound to UTP, in a pre-catalytic state | ELECTRON MICROSCOPY | 3.13 | 35 | |
4 | 8SQ9|1|T+ 8SQ9|1|P | SARS-CoV-2 replication-transcription complex bound to nsp9 and UMPCPP, as a pre-catalytic NMPylation intermediate | ELECTRON MICROSCOPY | 2.9 | 35 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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