1 | 5J7L|1|DA (rep) | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-ray diffraction | 3 | 2016-07-27 |
2 | 5J8A|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-ray diffraction | 3.1 | 2016-07-06 |
3 | 5JC9|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-ray diffraction | 3.03 | 2016-07-06 |
4 | 4YBB|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
5 | 5IT8|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 3.12 | 2016-07-27 |
6 | 4WOI|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-ray diffraction | 3 | 2015-08-05 |
7 | 4WOI|1|CA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-ray diffraction | 3 | 2015-08-05 |
8 | 6I7V|1|DA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Ribosomal protein paralogs bL31 and bL36 | X-ray diffraction | 2.9 | 2018-12-05 |
9 | 5J91|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-ray diffraction | 2.96 | 2016-07-06 |
10 | 4V9P|1|EA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
11 | 5J88|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-ray diffraction | 3.32 | 2016-07-06 |
12 | 4V9P|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
13 | 4V9P|1|GA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
14 | 4V9P|1|AA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
15 | 6LKQ|1|t | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin | X-ray diffraction | 3.1 | 2020-05-06 |
16 | 4V9D|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-ray diffraction | 3 | 2014-07-09 |
17 | 4V9O|1|AA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
18 | 4V9O|1|EA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
19 | 4WWW|1|RA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to CEM-101 | X-ray diffraction | 3.1 | 2014-12-24 |
20 | 4V9O|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
21 | 4V6C|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.19 | 2014-07-09 |
22 | 5J7L|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-ray diffraction | 3 | 2016-07-27 |
23 | 4V7T|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-ray diffraction | 3.19 | 2014-07-09 |
24 | 4U27|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-ray diffraction | 2.8 | 2014-07-30 |
25 | 4WF1|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to negamycin. | X-ray diffraction | 3.09 | 2014-11-05 |
26 | 5J8A|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-ray diffraction | 3.1 | 2016-07-06 |
27 | 5JC9|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-ray diffraction | 3.03 | 2016-07-06 |
28 | 4V7U|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to erythromycin. | X-ray diffraction | 3.1 | 2014-07-09 |
29 | 4V7V|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to clindamycin. | X-ray diffraction | 3.29 | 2014-07-09 |
30 | 4V52|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-ray diffraction | 3.21 | 2014-07-09 |
31 | 4U24|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
32 | 4U25|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-ray diffraction | 2.9 | 2014-07-30 |
33 | 4V9D|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-ray diffraction | 3 | 2014-07-09 |
34 | 4U26|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-ray diffraction | 2.8 | 2014-07-30 |
35 | 4V7S|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to telithromycin. | X-ray diffraction | 3.25 | 2014-07-09 |
36 | 4V57|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-ray diffraction | 3.5 | 2014-07-09 |
37 | 4V52|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-ray diffraction | 3.21 | 2014-07-09 |
38 | 4V57|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-ray diffraction | 3.5 | 2014-07-09 |
39 | 4V9O|1|GA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
40 | 4U1U|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to quinupristin. | X-ray diffraction | 2.95 | 2014-07-30 |
41 | 4V85|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome. | X-ray diffraction | 3.2 | 2014-07-09 |
42 | 4V54|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-ray diffraction | 3.3 | 2014-07-09 |
43 | 4V64|1|DB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-ray diffraction | 3.5 | 2014-07-09 |
44 | 4V50|1|DB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-ray diffraction | 3.22 | 2014-07-09 |
45 | 4V54|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-ray diffraction | 3.3 | 2014-07-09 |
46 | 4V64|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-ray diffraction | 3.5 | 2014-07-09 |
47 | 4V50|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-ray diffraction | 3.22 | 2014-07-09 |
48 | 4YBB|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
49 | 4U1V|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to linopristin. | X-ray diffraction | 3 | 2014-07-30 |
50 | 5J88|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-ray diffraction | 3.32 | 2016-07-06 |
51 | 4V9C|1|DA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Allosteric control of the ribosome by small-molecule antibiotics | X-ray diffraction | 3.3 | 2014-07-09 |
52 | 4U20|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
53 | 6I7V|1|CA | Large subunit ribosomal RNA | 23S ribsomal RNA | Escherichia coli | Bacteria | RF02541 | Ribosomal protein paralogs bL31 and bL36 | X-ray diffraction | 2.9 | 2018-12-05 |
54 | 4U27|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-ray diffraction | 2.8 | 2014-07-30 |
55 | 4V4Q|1|DB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
56 | 4V4Q|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
57 | 4U25|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-ray diffraction | 2.9 | 2014-07-30 |
58 | 4U1U|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to quinupristin. | X-ray diffraction | 2.95 | 2014-07-30 |
59 | 4V9C|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Allosteric control of the ribosome by small-molecule antibiotics | X-ray diffraction | 3.3 | 2014-07-09 |
60 | 4U1V|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to linopristin. | X-ray diffraction | 3 | 2014-07-30 |
61 | 5IT8|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 3.12 | 2016-07-27 |
62 | 4WF1|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to negamycin. | X-ray diffraction | 3.09 | 2014-11-05 |
63 | 4U24|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
64 | 4U26|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-ray diffraction | 2.8 | 2014-07-30 |
65 | 4U20|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
66 | 4V6C|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.19 | 2014-07-09 |
67 | 5J91|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-ray diffraction | 2.96 | 2016-07-06 |
68 | 4WWW|1|YA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to CEM-101 | X-ray diffraction | 3.1 | 2014-12-24 |
69 | 4V7T|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-ray diffraction | 3.19 | 2014-07-09 |
70 | 4V7V|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to clindamycin. | X-ray diffraction | 3.29 | 2014-07-09 |
71 | 4V7S|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to telithromycin. | X-ray diffraction | 3.25 | 2014-07-09 |
72 | 4V7U|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to erythromycin. | X-ray diffraction | 3.1 | 2014-07-09 |
73 | 5J5B|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the WT E coli ribosome bound to tetracycline | X-ray diffraction | 2.8 | 2016-07-27 |
74 | 4V4H|1|DB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
75 | 4V4H|1|BB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
76 | 5J5B|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the WT E coli ribosome bound to tetracycline | X-ray diffraction | 2.8 | 2016-07-27 |
77 | 6HRM|1|1 | Small subunit ribosomal RNA | stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S d2d8 stapled ribosome | Electron microscopy | 2.96 | 2018-12-19 |
78 | 8B0X|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli B | Bacteria | RF02541 | Translating 70S ribosome in the unrotated state (P and E, tRNAs) | Electron microscopy | 1.55 | 2022-11-30 |
79 | 8CGK|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli BW25113 | Bacteria | RF02541 | Lincomycin and Avilamycin bound to the 50S subunit | Electron microscopy | 1.64 | 2023-07-19 |
80 | 8CGV|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli BW25113 | Bacteria | RF02541 | Tiamulin bound to the 50S subunit | Electron microscopy | 1.66 | 2023-08-02 |
81 | 8CEU|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli BW25113 | Bacteria | RF02541 | Retapamulin and Capreomycin bound to the 50S subunit | Electron microscopy | 1.83 | 2023-07-26 |
82 | 8FTO|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S ribosome with an improved MS2 tag inserted in H98 | Electron microscopy | 1.85 | 2023-08-02 |
83 | 8E30|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound streptogramin A analog 3142 | Electron microscopy | 1.91 | 2023-06-28 |
84 | 8CAM|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli BW25113 | Bacteria | RF02541 | Evernimicin bound to the 50S subunit | Electron microscopy | 1.86 | 2023-07-26 |
85 | 8AYE|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S ribosome bound to thermorubin and fMet-tRNA | Electron microscopy | 1.96 | 2023-03-01 |
86 | 8E3O|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to solithromycin and VM1 | Electron microscopy | 1.99 | 2023-06-28 |
87 | 7K00|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | Electron microscopy | 1.98 | 2020-09-23 |
88 | 8CGD|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli BW25113 | Bacteria | RF02541 | Clindamycin bound to the 50S subunit | Electron microscopy | 1.98 | 2023-07-26 |
89 | 8E49|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to antibiotic analog SLC31 | Electron microscopy | 2.05 | 2023-06-28 |
90 | 8G6W|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe | Electron microscopy | 2.02 | 2023-04-05 |
91 | 7QQ3|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A. | Electron microscopy | 2.1 | 2023-01-18 |
92 | 8BIM|1|0 | Large subunit ribosomal RNA | 23S rRNA RRLG-RRNA | Escherichia coli K-12 | Bacteria | RF02541 | Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site | Electron microscopy | 2.04 | 2023-08-16 |
93 | 8E43|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound streptogramin A analog 3336 | Electron microscopy | 2.09 | 2023-06-28 |
94 | 7ZP8|1|b | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S E. coli ribosome with a stalled filamin domain 5 nascent chain | Electron microscopy | 2.2 | 2022-08-10 |
95 | 8BIL|1|0 | Large subunit ribosomal RNA | 23S rRNA RRLG-RRNA | Escherichia coli K-12 | Bacteria | RF02541 | Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site. | Electron microscopy | 2.04 | 2023-08-16 |
96 | 8G6Y|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe | Electron microscopy | 2.09 | 2023-04-05 |
97 | 8E41|1|I | Large subunit ribosomal RNA | 50S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to tiamulin and VS1 | Electron microscopy | 2.13 | 2023-06-28 |
98 | 8EMM|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates | Electron microscopy | 2.1 | 2023-05-31 |
99 | 6XZ7|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet). | Electron microscopy | 2.1 | 2020-07-22 |
100 | 8ANA|1|a | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli BW25113 | Bacteria | RF02541 | Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit | Electron microscopy | 2.1 | 2023-03-08 |
101 | 8BGE|1|0 | Large subunit ribosomal RNA | 23S rRNA RRLG-RRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.11 | 2023-08-16 |
102 | 7LVK|1|I | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cfr-modified 50S subunit from Escherichia coli | Electron microscopy | 2.2 | 2021-12-15 |
103 | 7Z20|1|b | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain | Electron microscopy | 2.29 | 2022-08-10 |
104 | 6PJ6|1|I | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High resolution cryo-EM structure of E.coli 50S | Electron microscopy | 2.2 | 2020-01-22 |
105 | 8E35|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound SAB002 | Electron microscopy | 2.27 | 2023-06-28 |
106 | 8E48|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to antibiotic analog SLC30 | Electron microscopy | 2.27 | 2023-06-28 |
107 | 7N1P|1|23 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation | Electron microscopy | 2.33 | 2021-07-14 |
108 | 8E33|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound streptogramin analog SAB001 | Electron microscopy | 2.23 | 2023-06-28 |
109 | 8BHL|1|0 | Large subunit ribosomal RNA | 23S rRNA RRLG-RRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.21 | 2023-08-16 |
110 | 7PJS|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C) | Electron microscopy | 2.35 | 2021-10-20 |
111 | 8E3M|1|I | Large subunit ribosomal RNA | 50S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to L-linker solithromycin conjugate | Electron microscopy | 2.25 | 2023-06-28 |
112 | 7S1H|1|I | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Wild-type Escherichia coli ribosome with antibiotic linezolid | Electron microscopy | 2.35 | 2021-11-17 |
113 | 8E47|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to antibiotic analog SLC26 | Electron microscopy | 2.32 | 2023-06-28 |
114 | 8E45|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to antibiotic analog SLC17 | Electron microscopy | 2.3 | 2023-06-28 |
115 | 8EIU|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S ribosome with A-loop mutations U2554C and U2555C | Electron microscopy | 2.24 | 2023-02-01 |
116 | 8E42|1|I | Large subunit ribosomal RNA | 50S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to tiamulin and azithromycin | Electron microscopy | 2.29 | 2023-06-28 |
117 | 8E46|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to antibiotic analog SLC21 | Electron microscopy | 2.32 | 2023-06-28 |
118 | 8E32|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1 | Electron microscopy | 2.35 | 2023-06-28 |
119 | 8E3L|1|I | Large subunit ribosomal RNA | 50S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to D-linker solithromycin conjugate | Electron microscopy | 2.35 | 2023-06-28 |
120 | 7S1K|1|I | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid | Electron microscopy | 2.42 | 2022-01-19 |
121 | 7O1A|1|BA | Large subunit ribosomal RNA | Ribosomal RNA 23S | Escherichia coli K-12 | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan | Electron microscopy | 2.4 | 2021-09-01 |
122 | 8AKN|1|a | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli BW25113 | Bacteria | RF02541 | Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome | Electron microscopy | 2.3 | 2023-03-08 |
123 | 8BF7|1|0 | Large subunit ribosomal RNA | 23S rRNA RRLG-RRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.33 | 2023-08-16 |
124 | 8G6X|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe | Electron microscopy | 2.31 | 2023-03-22 |
125 | 7S1J|1|I | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Wild-type Escherichia coli ribosome with antibiotic radezolid | Electron microscopy | 2.47 | 2022-03-02 |
126 | 7Y7G|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) | Electron microscopy | 2.34 | 2023-10-25 |
127 | 7S1I|1|I | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Wild-type Escherichia coli stalled ribosome with antibiotic radezolid | Electron microscopy | 2.48 | 2022-03-02 |
128 | 7S1G|1|I | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | wild-type Escherichia coli stalled ribosome with antibiotic linezolid | Electron microscopy | 2.48 | 2021-11-17 |
129 | 8E36|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound streptogramin A analog 3146 | Electron microscopy | 2.38 | 2023-06-28 |
130 | 8BHP|1|0 | Large subunit ribosomal RNA | 23S rRNA RRLG-RRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.37 | 2023-08-16 |
131 | 7BL4|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle | Electron microscopy | 2.4 | 2021-05-12 |
132 | 7YLA|1|I | Large subunit ribosomal RNA | Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of 50S-HflX complex | Electron microscopy | 2.52 | 2023-01-04 |
133 | 7N2U|1|23 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation | Electron microscopy | 2.53 | 2021-07-14 |
134 | 7N2V|1|23 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1) | Electron microscopy | 2.54 | 2021-07-14 |
135 | 7ZOD|1|b | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia | Electron microscopy | 2.56 | 2022-08-10 |
136 | 7Y7E|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU) | Electron microscopy | 2.41 | 2023-10-25 |
137 | 7SA4|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Damaged 70S ribosome with PrfH bound | Electron microscopy | 2.55 | 2022-08-03 |
138 | 7Y7F|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC) | Electron microscopy | 2.43 | 2023-10-25 |
139 | 6YS3|1|b | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide | Electron microscopy | 2.58 | 2020-09-30 |
140 | 7UG7|1|23 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B | Electron microscopy | 2.58 | 2022-05-18 |
141 | 6YSS|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state | Electron microscopy | 2.6 | 2020-08-19 |
142 | 6PCR|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 40o | Electron microscopy | 2.5 | 2020-06-17 |
143 | 6PC6|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 47 | Electron microscopy | 2.5 | 2020-06-17 |
144 | 6PC7|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 46 | Electron microscopy | 2.5 | 2020-06-17 |
145 | 7Y7C|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU) | Electron microscopy | 2.51 | 2023-10-25 |
146 | 7Y7H|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC) | Electron microscopy | 2.51 | 2023-10-25 |
147 | 8E44|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to antibiotic analog SLC09 | Electron microscopy | 2.53 | 2023-06-28 |
148 | 7NWT|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV) | Electron microscopy | 2.66 | 2021-12-15 |
149 | 7N30|1|23 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation | Electron microscopy | 2.66 | 2021-07-14 |
150 | 6XZB|1|A2 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification). | Electron microscopy | 2.54 | 2020-11-04 |
151 | 7ZQ5|1|b | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S E. coli ribosome with truncated uL23 and uL24 loops | Electron microscopy | 2.7 | 2022-08-10 |
152 | 7N31|1|23 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating 70S ribosome complex in a post-translocation (POST) conformation | Electron microscopy | 2.69 | 2021-07-14 |
153 | 7O1C|1|BA | Large subunit ribosomal RNA | Ribosomal RNA 23S | Escherichia coli K-12 | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan | Electron microscopy | 2.6 | 2021-09-01 |
154 | 7ZTA|1|23S1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide | Electron microscopy | 2.7 | 2023-04-12 |
155 | 6TBV|1|23S1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2) | Electron microscopy | 2.7 | 2020-01-01 |
156 | 6TC3|1|23S1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1) | Electron microscopy | 2.7 | 2020-01-01 |
157 | 7Y7D|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU) | Electron microscopy | 2.58 | 2023-10-25 |
158 | 8BH4|1|0 | Large subunit ribosomal RNA | 23S rRNA RRLG-RRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.62 | 2023-08-16 |
159 | 7ZQ6|1|b | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain | Electron microscopy | 2.75 | 2022-08-10 |
160 | 6PCQ|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to VM2 | Electron microscopy | 2.6 | 2020-06-17 |
161 | 7N2C|1|23 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2) | Electron microscopy | 2.72 | 2021-07-14 |
162 | 8EKC|1|A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA | Electron microscopy | 2.7 | 2022-12-07 |
163 | 6XZA|1|A2 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification). | Electron microscopy | 2.66 | 2020-11-04 |
164 | 7M5D|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I) | Electron microscopy | 2.8 | 2022-10-19 |
165 | 6QDW|1|b | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide | Electron microscopy | 2.83 | 2020-01-15 |
166 | 6PC5|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compounds 46 and VS1 | Electron microscopy | 2.7 | 2020-06-17 |
167 | 7NSO|1|A | Large subunit ribosomal RNA | 23S rRNA (2903-MER) | Escherichia coli | Bacteria | RF02541 | Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA | Electron microscopy | 2.9 | 2021-07-14 |
168 | 7ST2|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII) | Electron microscopy | 2.9 | 2022-02-23 |
169 | 7OT5|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | CspA-70 cotranslational folding intermediate 1 | Electron microscopy | 2.9 | 2022-01-19 |
170 | 7OTC|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli BL21(DE3) | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B | Electron microscopy | 2.9 | 2022-05-11 |
171 | 5AFI|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | Electron microscopy | 2.9 | 2015-03-11 |
172 | 7B5K|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain. | Electron microscopy | 2.9 | 2021-05-26 |
173 | 8BHJ|1|0 | Large subunit ribosomal RNA | 23S rRNA RRLG-RRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.81 | 2023-08-16 |
174 | 6WYV|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compounds 47 and VS1 | Electron microscopy | 2.75 | 2020-06-17 |
175 | 8AM9|1|a | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli BW25113 | Bacteria | RF02541 | Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome | Electron microscopy | 2.8 | 2023-03-08 |
176 | 6PCT|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 41q | Electron microscopy | 2.8 | 2020-06-17 |
177 | 6U48|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S with phazolicin (PHZ) bound in exit tunnel | Electron microscopy | 2.87 | 2019-09-18 |
178 | 6Y69|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX | Electron microscopy | 2.86 | 2020-07-01 |
179 | 8SYL|1|A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs | Electron microscopy | 2.9 | 2023-08-09 |
180 | 6PCS|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 40e | Electron microscopy | 2.8 | 2020-06-17 |
181 | 7O19|1|BA | Large subunit ribosomal RNA | Ribosomal RNA 23S | Escherichia coli K-12 | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan | Electron microscopy | 2.9 | 2021-09-01 |
182 | 7ST6|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Pre translocation, non-rotated 70S ribosome (Structure I) | Electron microscopy | 3 | 2022-02-23 |
183 | 7TOS|1|23S | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20 | Electron microscopy | 2.9 | 2022-05-25 |
184 | 6WNT|1|4 | 23s-5s joint ribosomal RNA | 23s-5s joint ribosomal RNA | Escherichia coli | Bacteria | RF00001 | 50S ribosomal subunit without free 5S rRNA and perturbed PTC | Electron microscopy | 3.1 | 2020-06-24 |
185 | 8BGH|1|0 | Large subunit ribosomal RNA | 23S rRNA RRLG-RRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.88 | 2023-08-16 |
186 | 5NWY|1|N | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex | Electron microscopy | 2.9 | 2017-07-19 |
187 | 6WD0|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A) | Electron microscopy | 3 | 2020-07-01 |
188 | 7OII|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | CspA-70 cotranslational folding intermediate 2 | Electron microscopy | 3 | 2022-01-19 |
189 | 7OIF|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | CspA-27 cotranslational folding intermediate 2 | Electron microscopy | 3 | 2022-01-19 |
190 | 6WDE|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B) | Electron microscopy | 3 | 2020-07-01 |
191 | 8B7Y|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B. | Electron microscopy | 3 | 2023-01-25 |
192 | 8BHN|1|0 | Large subunit ribosomal RNA | 23S rRNA RRLG-RRNA | Escherichia coli K-12 | Bacteria | RF02541 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.85 | 2023-08-16 |
193 | 5H5U|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Mechanistic insights into the alternative translation termination by ArfA and RF2 | Electron microscopy | 3.01 | 2017-01-25 |
194 | 7OIZ|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide | Electron microscopy | 2.9 | 2021-09-15 |
195 | 7P3K|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control) | Electron microscopy | 2.9 | 2021-10-27 |
196 | 7NWW|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | CspA-27 cotranslational folding intermediate 1 | Electron microscopy | 3.05 | 2022-01-19 |
197 | 6ORE|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Release complex 70S | Electron microscopy | 2.9 | 2019-06-19 |
198 | 7Q4K|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain | Electron microscopy | 3 | 2022-11-16 |
199 | 6PC8|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 40q | Electron microscopy | 2.9 | 2020-06-17 |
200 | 5MDV|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state) | Electron microscopy | 2.97 | 2016-12-14 |
201 | 8G2U|1|B | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms | Electron microscopy | 3 | 2023-12-06 |
202 | 6H4N|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome | Electron microscopy | 3 | 2018-09-05 |
203 | 7AC7|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Structure of accomodated trans-translation complex on E. Coli stalled ribosome. | Electron microscopy | 3.08 | 2021-08-18 |
204 | 7NSQ|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA | Electron microscopy | 3.1 | 2021-07-14 |
205 | 6WNW|1|4 | 23s-5s joint ribosomal RNA | 23s-5s joint ribosomal RNA | Escherichia coli | Bacteria | RF00001 | Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA | Electron microscopy | 3.2 | 2020-06-24 |
206 | 6ZU1|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in uncoupled state 2 | Electron microscopy | 3 | 2020-09-16 |
207 | 6ZTO|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in uncoupled state 1 | Electron microscopy | 3 | 2020-09-23 |
208 | 6ZTP|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in uncoupled state 6 | Electron microscopy | 3 | 2020-09-16 |
209 | 6PCH|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 21 | Electron microscopy | 2.9 | 2020-06-17 |
210 | 6OM6|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA | Electron microscopy | 3.1 | 2021-02-10 |
211 | 6X7K|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.1 | 2020-09-02 |
212 | 6YSR|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the P+9 stalled ribosome complex | Electron microscopy | 3.1 | 2020-08-19 |
213 | 7PJY|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP) | Electron microscopy | 3.1 | 2021-10-20 |
214 | 7PJV|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi) | Electron microscopy | 3.1 | 2021-10-20 |
215 | 7NBU|1|a | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome. | Electron microscopy | 3.11 | 2022-03-02 |
216 | 8AP4|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA | Electron microscopy | 3 | 2022-11-16 |
217 | 5MDW|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state) | Electron microscopy | 3.06 | 2016-12-14 |
218 | 6SZS|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis | Electron microscopy | 3.06 | 2019-12-04 |
219 | 5MGP|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs | Electron microscopy | 3.1 | 2016-12-14 |
220 | 7K54|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS) | Electron microscopy | 3.2 | 2021-07-28 |
221 | 7K53|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS) | Electron microscopy | 3.2 | 2021-07-28 |
222 | 7SSN|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B) | Electron microscopy | 3.2 | 2022-02-23 |
223 | 7LV0|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS) | Electron microscopy | 3.2 | 2021-07-28 |
224 | 7SSO|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A) | Electron microscopy | 3.2 | 2022-02-23 |
225 | 7ST7|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio) | Electron microscopy | 3.2 | 2022-02-23 |
226 | 8G34|1|B | Large subunit ribosomal RNA | 23S | Escherichia coli | Bacteria | RF02541 | Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate | Electron microscopy | 3.2 | 2023-12-06 |
227 | 8G38|1|B | Large subunit ribosomal RNA | 23S | Escherichia coli | Bacteria | RF02541 | Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate | Electron microscopy | 3.2 | 2023-12-06 |
228 | 5MDZ|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S ribosome (empty A site) | Electron microscopy | 3.1 | 2016-12-14 |
229 | 6S0K|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA, tRNA-CCA | Escherichia coli | Bacteria | RF02541 | Ribosome nascent chain in complex with SecA | Electron microscopy | 3.1 | 2019-10-09 |
230 | 5U9G|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I) | Electron microscopy | 3.2 | 2017-03-22 |
231 | 5U9F|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II) | Electron microscopy | 3.2 | 2017-03-22 |
232 | 6WDD|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A) | Electron microscopy | 3.2 | 2020-07-01 |
233 | 5UYM|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III) | Electron microscopy | 3.2 | 2017-06-07 |
234 | 7OIG|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | CspA-27 cotranslational folding intermediate 3 | Electron microscopy | 3.2 | 2022-01-19 |
235 | 7ACJ|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Structure of translocated trans-translation complex on E. coli stalled ribosome. | Electron microscopy | 3.2 | 2021-08-18 |
236 | 6ENU|1|A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P) | Electron microscopy | 3.1 | 2017-11-22 |
237 | 6X6T|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.2 | 2020-09-02 |
238 | 6YST|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state | Electron microscopy | 3.2 | 2020-08-19 |
239 | 7ABZ|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome. | Electron microscopy | 3.21 | 2021-08-18 |
240 | 6QUL|1|A | Large subunit ribosomal RNA | 23S rRNA, P-site fMet-tRNA(fMet) | Escherichia coli | Bacteria | RF02541 | Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid | Electron microscopy | 3 | 2019-04-10 |
241 | 6VWL|1|2 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation) | Electron microscopy | 3.1 | 2020-06-03 |
242 | 5WFS|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) | Electron microscopy | 3 | 2018-05-02 |
243 | 7BL5|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli str. K-12 substr. MG1655 | Bacteria | RF02541 | pre-50S-ObgE particle | Electron microscopy | 3.3 | 2021-05-12 |
244 | 7K55|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS) | Electron microscopy | 3.3 | 2021-07-28 |
245 | 7JT1|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III) | Electron microscopy | 3.3 | 2020-11-11 |
246 | 7SSD|1|1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Mid translocation intermediate with EF-G bound with GDP (Structure IV) | Electron microscopy | 3.3 | 2022-02-23 |
247 | 6WDG|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B) | Electron microscopy | 3.3 | 2020-07-01 |
248 | 8G31|1|B | Large subunit ribosomal RNA | 23S | Escherichia coli | Bacteria | RF02541 | Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate | Electron microscopy | 3.2 | 2023-12-06 |
249 | 6WDF|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A) | Electron microscopy | 3.3 | 2020-07-01 |
250 | 6WD1|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B) | Electron microscopy | 3.3 | 2020-07-01 |
251 | 6OG7|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II) | Electron microscopy | 3.3 | 2019-09-25 |
252 | 5WE4|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu wt complex with GppNHp | Electron microscopy | 3.1 | 2018-04-25 |
253 | 6OFX|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Non-rotated ribosome (Structure I) | Electron microscopy | 3.3 | 2019-09-25 |
254 | 3JBV|1|b | Large subunit ribosomal RNA | RNA (2903-MER) | Escherichia coli | Bacteria | RF02541 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.32 | 2016-01-27 |
255 | 7CPJ|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | ycbZ-stalled 70S ribosome | Electron microscopy | 3.3 | 2021-12-08 |
256 | 6C4I|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Conformation of methylated GGQ in the peptidyl transferase center during translation termination | Electron microscopy | 3.24 | 2018-02-21 |
257 | 5WDT|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu H84A complex with GppNHp | Electron microscopy | 3 | 2018-04-25 |
258 | 7QGN|1|N | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the SmrB-bound E. coli disome - stalled 70S ribosome | Electron microscopy | 3.37 | 2022-04-27 |
259 | 7BV8|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Mature 50S ribosomal subunit from RrmJ knock out E.coli strain | Electron microscopy | 3.14 | 2020-07-01 |
260 | 6ENF|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P | Electron microscopy | 3.2 | 2017-11-22 |
261 | 7K50|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Pre-translocation non-frameshifting(CCA-A) complex (Structure I) | Electron microscopy | 3.4 | 2021-07-28 |
262 | 7K52|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III) | Electron microscopy | 3.4 | 2021-07-28 |
263 | 6WNV|1|4 | 23s-5s joint ribosomal RNA | 23s-5s joint ribosomal RNA | Escherichia coli | Bacteria | RF00001 | 70S ribosome without free 5S rRNA and with a perturbed PTC | Electron microscopy | 3.5 | 2020-06-24 |
264 | 6OGI|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V) | Electron microscopy | 3.4 | 2019-09-25 |
265 | 5GAE|1|A | Large subunit ribosomal RNA | 23S rRNA, tRNA CCA end (5'-R(P*CP*CP*A)-3') | Escherichia coli | Bacteria | RF02541 | RNC in complex with a translocating SecYEG | Electron microscopy | 3.33 | 2016-01-27 |
266 | 8A3L|1|a | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Structural insights into the binding of bS1 to the ribosome | Electron microscopy | 3.42 | 2023-05-10 |
267 | 3JCE|1|A | Large subunit ribosomal RNA | 23 ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4) | Electron microscopy | 3.2 | 2016-01-13 |
268 | 7ACR|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Structure of post-translocated trans-translation complex on E. coli stalled ribosome. | Electron microscopy | 3.44 | 2021-08-18 |
269 | 5MDY|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state) | Electron microscopy | 3.35 | 2016-12-21 |
270 | 5LZD|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA) | Electron microscopy | 3.4 | 2016-11-23 |
271 | 7D6Z|1|A | Large subunit ribosomal RNA | 23S ribosomal rRNA | Escherichia coli | Bacteria | RF02541 | Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor | Electron microscopy | 3.4 | 2021-04-07 |
272 | 6ZTM|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in collided state without NusG | Electron microscopy | 3.3 | 2020-09-16 |
273 | 5WE6|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA | Electron microscopy | 3.4 | 2018-04-25 |
274 | 6I0Y|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel | Electron microscopy | 3.2 | 2018-12-05 |
275 | 7NSP|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA | Electron microscopy | 3.5 | 2021-08-11 |
276 | 7JT2|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | 70S ribosome stalled on long mRNA with ArfB bound in the A site | Electron microscopy | 3.5 | 2020-11-11 |
277 | 7K51|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II) | Electron microscopy | 3.5 | 2021-07-28 |
278 | 6X7F|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.5 | 2020-09-02 |
279 | 6BU8|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome with S1 domains 1 and 2 (Class 1) | Electron microscopy | 3.5 | 2018-01-31 |
280 | 5WFK|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3) | Electron microscopy | 3.4 | 2018-05-02 |
281 | 5O2R|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome | Electron microscopy | 3.4 | 2017-07-26 |
282 | 5LZE|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C) | Electron microscopy | 3.5 | 2016-11-23 |
283 | 8C8Y|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM captures early ribosome assembly in action | Electron microscopy | 3.03 | 2023-04-05 |
284 | 6ZTJ|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA) | Electron microscopy | 3.4 | 2020-09-16 |
285 | 5U4I|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | Electron microscopy | 3.5 | 2017-01-11 |
286 | 6VWN|1|2 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II) | Electron microscopy | 3.4 | 2020-06-03 |
287 | 6VWM|1|2 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I) | Electron microscopy | 3.4 | 2020-06-03 |
288 | 7OJ0|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2 | Electron microscopy | 3.5 | 2021-09-15 |
289 | 5IQR|1|1 | Large subunit ribosomal RNA | LSU rRNA | Escherichia coli | Bacteria | RF02541 | Structure of RelA bound to the 70S ribosome | Electron microscopy | 3 | 2016-05-04 |
290 | 6OSQ|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | RF1 accommodated state bound Release complex 70S at long incubation time point | Electron microscopy | 3.5 | 2019-06-26 |
291 | 7BL3|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | pre-50S-ObgE particle state 2 | Electron microscopy | 3.5 | 2021-05-12 |
292 | 6ORL|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | RF1 pre-accommodated 70S complex at 24 ms | Electron microscopy | 3.5 | 2019-06-19 |
293 | 7ODE|1|I | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | E. coli 50S ribosome LiCl core particle | Electron microscopy | 2.84 | 2022-06-01 |
294 | 6ZTL|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in collided state bound to NusG | Electron microscopy | 3.5 | 2020-09-16 |
295 | 8C8Z|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM captures early ribosome assembly in action | Electron microscopy | 3.12 | 2023-04-05 |
296 | 8C90|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM captures early ribosome assembly in action | Electron microscopy | 3.15 | 2023-04-05 |
297 | 8CGJ|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli BW25113 | Bacteria | RF02541 | Streptomycin bound to the 30S body | Electron microscopy | 1.79 | 2023-07-26 |
298 | 8CGU|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli BW25113 | Bacteria | RF02541 | Gentamicin bound to the 30S body | Electron microscopy | 1.89 | 2023-07-26 |
299 | 8CEP|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli BW25113 | Bacteria | RF02541 | Round2 30S head (no antibiotic) | Electron microscopy | 2.04 | 2023-07-19 |
300 | 8CGR|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli BW25113 | Bacteria | RF02541 | Apramycin bound to the 30S body | Electron microscopy | 2.12 | 2023-07-26 |
301 | 6C4H|1|A | Large subunit ribosomal RNA | 23S rRNA, P-site tRNA fMet | Escherichia coli | Bacteria | RF02541 | Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region) | Electron microscopy | 3.1 | 2018-02-21 |
302 | 8C99|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Time limited cryo-EM reveals early ribosome assembly in action | Electron microscopy | 3.29 | 2023-04-05 |