#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14WF9|1|Y (rep)5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycinX-ray diffraction3.432015-10-21
24WFA|1|Y5S ribosomal RNA5S rRNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolidX-ray diffraction3.392015-10-21
34WFB|1|Y5S ribosomal RNA5S rRNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205X-ray diffraction3.432015-10-21
45NRG|1|Y5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02X-ray diffraction3.442017-08-09
56S0Z|1|B5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.Electron microscopy2.32019-08-21
66S0X|1|B5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.Electron microscopy2.422019-08-21
76HMA|1|B5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunitElectron microscopy2.652018-11-14
85NGM|1|AB5S ribosomal RNA5S Ribosomal RNAStaphylococcus aureusBacteriaRF000012.9S structure of the 70S ribosome composing the S. aureus 100S complexElectron microscopy2.92017-10-04
96DDD|1|25S ribosomal RNA5S rRNAStaphylococcus aureusBacteriaRF00001Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-5Electron microscopy3.12019-03-20
106DDG|1|25S ribosomal RNA5S rRNAStaphylococcus aureusBacteriaRF00001Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-6Electron microscopy3.12019-03-20
116S12|1|B5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).Electron microscopy3.22019-08-21

Release history

Release3.883.893.903.913.923.933.943.953.963.973.98
Date2019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_83891.13NR_3.5_83891.123.88(8) 4WF9|1|Y, 4WFA|1|Y, 4WFB|1|Y, 5NGM|1|AB, 5NRG|1|Y, 6DDD|1|2, 6DDG|1|2, 6HMA|1|B(3) 6S0X|1|B, 6S0Z|1|B, 6S12|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_83891.13NR_3.5_44396.13.99(2) 6DDD|1|2, 6DDG|1|2(9) 4WF9|1|Y, 4WFA|1|Y, 4WFB|1|Y, 5NGM|1|AB, 5NRG|1|Y, 6HMA|1|B, 6S0X|1|B, 6S0Z|1|B, 6S12|1|B(0)
NR_3.5_83891.13NR_3.5_83891.143.99(9) 4WF9|1|Y, 4WFA|1|Y, 4WFB|1|Y, 5NGM|1|AB, 5NRG|1|Y, 6HMA|1|B, 6S0X|1|B, 6S0Z|1|B, 6S12|1|B(2) 6DDD|1|2, 6DDG|1|2(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
15NRG|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02X-RAY DIFFRACTION3.44114
24WF9|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycinX-RAY DIFFRACTION3.43114
34WFB|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205X-RAY DIFFRACTION3.43114
44WFA|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolidX-RAY DIFFRACTION3.39114
56S12|1|BErythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).ELECTRON MICROSCOPY3.2115
66S0X|1|BErythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.ELECTRON MICROSCOPY2.42115
76S0Z|1|BErythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.ELECTRON MICROSCOPY2.3114
86HMA|1|BImproved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunitELECTRON MICROSCOPY2.65115
95NGM|1|AB2.9S structure of the 70S ribosome composing the S. aureus 100S complexELECTRON MICROSCOPY2.9115
106DDG|1|2Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-6ELECTRON MICROSCOPY3.1104
116DDD|1|2Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-5ELECTRON MICROSCOPY3.1104

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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