Equivalence class NR_3.5_85511.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9ZNG|1|1 (rep) | Large subunit ribosomal RNA | 23S rRNA | Methanosarcina acetivorans | Archaea | RF02540 | Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriD | Electron microscopy | 2.06 | 2711 | 2026-01-28 |
| 2 | 9ZNF|1|1 | Large subunit ribosomal RNA | 23S rRNA | Methanosarcina acetivorans | Archaea | RF02540 | Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriA and SriB | Electron microscopy | 2.03 | 2716 | 2026-01-28 |
| 3 | 9NTA|1|BA | Large subunit ribosomal RNA | 23S rRNA | Methanosarcina acetivorans | Archaea | RF02540 | Methanosarcina acetivorans 50S subunit obtained from methanol-grown cells | Electron microscopy | 2.38 | 2884 | 2025-09-24 |
| 4 | 9ZNI|1|1 | Large subunit ribosomal RNA | 23S rRNA | Methanosarcina acetivorans | Archaea | RF02540 | Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriC and SriD | Electron microscopy | 2.89 | 2711 | 2026-01-28 |
| 5 | 9NRI|1|BA | Large subunit ribosomal RNA | 23S rRNA | Methanosarcina acetivorans | Archaea | RF02540 | Methanosarcina acetivorans 50S subunit obtained from acetate-grown cells | Electron microscopy | 2.85 | 2884 | 2025-09-24 |
| 6 | 9O17|1|BA | Large subunit ribosomal RNA | 23S rRNA | Methanosarcina acetivorans | Archaea | RF02540 | Cryo-EM structure of Methanosarcina acetivorans 70S ribosome | Electron microscopy | 2.92 | 2776 | 2025-09-24 |
Release history
| Release | 4.24 |
|---|---|
| Date | 2026-01-28 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9ZNF|1|1 | Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriA and SriB | ELECTRON MICROSCOPY | 2.03 | 2716 | |
| 2 | 9ZNI|1|1 | Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriC and SriD | ELECTRON MICROSCOPY | 2.89 | 2711 | |
| 3 | 9ZNG|1|1 | Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriD | ELECTRON MICROSCOPY | 2.06 | 2711 | |
| 4 | 9NTA|1|BA | Methanosarcina acetivorans 50S subunit obtained from methanol-grown cells | ELECTRON MICROSCOPY | 2.38 | 2884 | |
| 5 | 9O17|1|BA | Cryo-EM structure of Methanosarcina acetivorans 70S ribosome | ELECTRON MICROSCOPY | 2.92 | 2776 | |
| 6 | 9NRI|1|BA | Methanosarcina acetivorans 50S subunit obtained from acetate-grown cells | ELECTRON MICROSCOPY | 2.85 | 2884 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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