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Equivalence class NR_3.5_93855.4 Obsolete

Showing 1 to 6 of 6 entries
#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
16VMI|1|AA (rep)Small subunit ribosomal RNA12s rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)Electron microscopy2.969442020-08-05
26VLZ|1|AASmall subunit ribosomal RNA12s rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)Electron microscopy2.979442020-08-05
36RW4|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3Electron microscopy2.979552020-06-03
46RW5|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3Electron microscopy3.149552020-06-03
56ZSC|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with E-site tRNAElectron microscopy3.59272020-09-16
63J9M|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome (class 1)Electron microscopy3.59232015-04-15

Release history

Release3.1583.1593.160
Date2020-12-232020-12-302021-01-06

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_93855.4NR_3.5_93855.33.158(6) 3J9M|1|AA, 6RW4|1|A, 6RW5|1|A, 6VLZ|1|AA, 6VMI|1|AA, 6ZSC|1|AA(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_93855.4NR_3.5_93855.53.161(6) 3J9M|1|AA, 6RW4|1|A, 6RW5|1|A, 6VLZ|1|AA, 6VMI|1|AA, 6ZSC|1|AA(0) (2) 6ZM5|1|AA, 6ZM6|1|AA

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

Showing 1 to 6 of 6 entries
#SViewPDBTitleMethodResolution#NTs
16RW4|1|AStructure of human mitochondrial 28S ribosome in complex with mitochondrial IF3ELECTRON MICROSCOPY2.97955
26RW5|1|AStructure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3ELECTRON MICROSCOPY3.14955
33J9M|1|AAStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.5923
46ZSC|1|AAHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.5927
56VMI|1|AAStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.96944
66VLZ|1|AAStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.97944

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

6RW4|1|A:6RW4|1|A = 06RW4|1|A:6RW5|1|A = 0.01396RW4|1|A:3J9M|1|AA = 0.04986RW4|1|A:6ZSC|1|AA = 0.05686RW4|1|A:6VMI|1|AA = 0.07456RW4|1|A:6VLZ|1|AA = 0.08036RW5|1|A:6RW4|1|A = 0.01396RW5|1|A:6RW5|1|A = 06RW5|1|A:3J9M|1|AA = 0.04896RW5|1|A:6ZSC|1|AA = 0.05606RW5|1|A:6VMI|1|AA = 0.07416RW5|1|A:6VLZ|1|AA = 0.07953J9M|1|AA:6RW4|1|A = 0.04983J9M|1|AA:6RW5|1|A = 0.04893J9M|1|AA:3J9M|1|AA = 03J9M|1|AA:6ZSC|1|AA = 0.04133J9M|1|AA:6VMI|1|AA = 0.06463J9M|1|AA:6VLZ|1|AA = 0.07546ZSC|1|AA:6RW4|1|A = 0.05686ZSC|1|AA:6RW5|1|A = 0.05606ZSC|1|AA:3J9M|1|AA = 0.04136ZSC|1|AA:6ZSC|1|AA = 06ZSC|1|AA:6VMI|1|AA = 0.06906ZSC|1|AA:6VLZ|1|AA = 0.07946VMI|1|AA:6RW4|1|A = 0.07456VMI|1|AA:6RW5|1|A = 0.07416VMI|1|AA:3J9M|1|AA = 0.06466VMI|1|AA:6ZSC|1|AA = 0.06906VMI|1|AA:6VMI|1|AA = 06VMI|1|AA:6VLZ|1|AA = 0.04546VLZ|1|AA:6RW4|1|A = 0.08036VLZ|1|AA:6RW5|1|A = 0.07956VLZ|1|AA:3J9M|1|AA = 0.07546VLZ|1|AA:6ZSC|1|AA = 0.07946VLZ|1|AA:6VMI|1|AA = 0.04546VLZ|1|AA:6VLZ|1|AA = 06RW4|1|A6RW5|1|A3J9M|1|AA6ZSC|1|AA6VMI|1|AA6VLZ|1|AADiscrepancy0.000.020.040.060.08

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