RNA 3D Hub //

Equivalence class NR_3.5_97014.2 Current

Showing 1 to 3 of 3 entries
#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
14V5K|1|AX (rep)MRNAsynthetic constructStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.2162014-07-09
24V8X|1|AX5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*AP*AP*AP *AP*AP*UP*G U2M A2M A2MP*AP*AP*AP*A)-3'synthetic constructStructure of Thermus thermophilus ribosomeX-ray diffraction3.35112014-07-09
37MSH|1|zmRNAMycobacterium tuberculosis H37RvMtb 70SIC in complex with MtbEttA at Pre_R1 stateElectron microscopy3.2362022-02-02

Release history

Release3.3823.3833.3843.3853.3863.3873.3883.3893.3903.3913.392
Date2025-04-092025-04-162025-04-232025-04-302025-05-072025-05-142025-05-212025-05-282025-06-042025-06-112025-06-18

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

Showing 1 to 3 of 3 entries
#SViewPDBTitleMethodResolution#NTs
14V8X|1|AXStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.3511
24V5K|1|AXStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.216
37MSH|1|zMtb 70SIC in complex with MtbEttA at Pre_R1 stateELECTRON MICROSCOPY3.236

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

4V8X|1|AX:4V8X|1|AX = 04V8X|1|AX:4V5K|1|AX = 0.13614V8X|1|AX:7MSH|1|z not available4V5K|1|AX:4V8X|1|AX = 0.13614V5K|1|AX:4V5K|1|AX = 04V5K|1|AX:7MSH|1|z = 0.20297MSH|1|z:4V8X|1|AX not available7MSH|1|z:4V5K|1|AX = 0.20297MSH|1|z:7MSH|1|z = 04V8X|1|AX4V5K|1|AX7MSH|1|zDiscrepancy0.000.050.100.150.20

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