Equivalence class NR_4.0_00699.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8AS7|1|P+ 8AS7|1|G+ 8AS7|1|T (rep) | RNA (5'-R(*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*CP*AP*GP*A)-3'), RNA (5'-R(P*AP*CP*A)-3'), RNA (5'-R(P*CP*UP*GP*GP*GP*CP*GP*GP*UP*CP*UP*UP*UP*GP*UP*GP*U)-3') | SFTS virus AH12 | Structure of the SFTSV L protein stalled at early elongation [EARLY-ELONGATION] | Electron microscopy | 2.6 | 37 | 2023-01-18 | |||
| 2 | 8R6U|1|P+ 8R6U|1|T+ 8R6U|1|G | RNA (5'-R(P*CP*UP*GP*GP*GP*CP*GP*GP*UP*CP*UP*UP*UP*GP*UP*GP*U)-3'), RNA primer, RNA primer tail-end | SFTS virus AH12 | Structure of the SFTSV L protein in a transcription-priming state without capped RNA [TRANSCRIPTION-PRIMING (in vitro)] | Electron microscopy | 2.98 | 37 | 2024-04-24 | |||
| 3 | 8R6W|1|P+ 8R6W|1|T+ 8R6W|1|G | RNA (5'-R(*AP*CP*AP*C)-3'), RNA (5'-R(*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*CP*AP*G)-3'), RNA (5'-R(P*CP*UP*GP*GP*GP*CP*GP*GP*UP*CP*UP*UP*UP*GP*UP*GP*U)-3') | SFTS virus AH12 | Structure of the SFTSV L protein in a transcription-priming state with bound capped RNA [TRANSCRIPTION-PRIMING] | Electron microscopy | 3.35 | 37 | 2024-04-24 | |||
| 4 | 8R6Y|1|P+ 8R6Y|1|T+ 8R6Y|1|G | RNA (5'-R(*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*CP*AP*G)-3'), RNA (5'-R(P*AP*CP*A)-3'), RNA (5'-R(P*CP*UP*GP*GP*GP*CP*GP*GP*UP*AP*AP*AP*UP*GP*U)-3') | SFTS virus AH12 | Structure of the SFTSV L protein stalled in a transcription-specific early elongation state with bound capped RNA [TRANSCRIPTION-EARLY-ELONGATION] | Electron microscopy | 3.4 | 34 | 2024-04-24 | |||
| 5 | 8ASB|1|P+ 8ASB|1|T | RNA (5'-R(*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*CP*AP*GP*A)-3'), RNA (5'-R(P*UP*CP*UP*GP*GP*GP*CP*GP*GP*UP*CP*UP*UP*UP*GP*UP*GP*U)-3') | SFTS virus AH12 | Structure of the SFTSV L protein stalled at early elongation with the endonuclease domain in a raised conformation [EARLY-ELONGATION-ENDO] | Electron microscopy | 3.6 | 35 | 2023-01-18 | |||
| 6 | 8ASD|1|P | RNA (5'-R(P*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*CP*AP*GP*AP*UP*GP*A)-3') | SFTS virus AH12 | Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION] | Electron microscopy | 2.6 | 11 | 2023-01-18 | |||
| 7 | 8AS6|1|P | RNA (5'-R(*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*C)-3') | SFTS virus AH12 | Structure of the SFTSV L protein bound to 5' cRNA hook [5' HOOK] | Electron microscopy | 3.4 | 14 | 2023-01-18 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 8ASB|1|P+ 8ASB|1|T | Structure of the SFTSV L protein stalled at early elongation with the endonuclease domain in a raised conformation [EARLY-ELONGATION-ENDO] | ELECTRON MICROSCOPY | 3.6 | 35 | |
| 2 | 8ASD|1|P | Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION] | ELECTRON MICROSCOPY | 2.6 | 11 | |
| 3 | 8AS7|1|P+ 8AS7|1|G+ 8AS7|1|T | Structure of the SFTSV L protein stalled at early elongation [EARLY-ELONGATION] | ELECTRON MICROSCOPY | 2.6 | 37 | |
| 4 | 8R6U|1|P+ 8R6U|1|T+ 8R6U|1|G | Structure of the SFTSV L protein in a transcription-priming state without capped RNA [TRANSCRIPTION-PRIMING (in vitro)] | ELECTRON MICROSCOPY | 2.98 | 37 | |
| 5 | 8R6W|1|P+ 8R6W|1|T+ 8R6W|1|G | Structure of the SFTSV L protein in a transcription-priming state with bound capped RNA [TRANSCRIPTION-PRIMING] | ELECTRON MICROSCOPY | 3.35 | 37 | |
| 6 | 8R6Y|1|P+ 8R6Y|1|T+ 8R6Y|1|G | Structure of the SFTSV L protein stalled in a transcription-specific early elongation state with bound capped RNA [TRANSCRIPTION-EARLY-ELONGATION] | ELECTRON MICROSCOPY | 3.4 | 34 | |
| 7 | 8AS6|1|P | Structure of the SFTSV L protein bound to 5' cRNA hook [5' HOOK] | ELECTRON MICROSCOPY | 3.4 | 14 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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