Equivalence class NR_4.0_04229.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9NH5|1|Z+ 9NH5|1|Y (rep) | U7 small nuclear RNA + Histone 3' UTR stem-loop | Methylated H2A* pre-mRNA, U7 snRNA | Homo sapiens | Eukarya | RF00066 + RF00032 | CRYO-EM STRUCTURE OF HUMAN U7 SNRNP WITH METHYLATED noncleavable H2A* SUBSTRATE PRE-MRNA (core region) | Electron microscopy | 2.82 | 49 | 2026-01-21 |
| 2 | 9NH6|1|Z+ 9NH6|1|Y | U7 small nuclear RNA + Histone 3' UTR stem-loop | Methylated H2A* pre-mRNA, U7 snRNA | Homo sapiens | Eukarya | RF00066 + RF00032 | CRYO-EM STRUCTURE OF HUMAN U7 SNRNP WITH METHYLATED noncleavable H2A* SUBSTRATE PRE-MRNA (COMPOSITE MAP) | Electron microscopy | 2.82 | 49 | 2026-01-21 |
| 3 | 6V4X|1|Z+ 6V4X|1|Y | U7 small nuclear RNA + Histone 3' UTR stem-loop | modified H2a pre-mRNA, U7 snRNA | Homo sapiens | Eukarya | RF00066 + RF00032 | Cryo-EM structure of an active human histone pre-mRNA 3'-end processing machinery at 3.2 Angstrom resolution | Electron microscopy | 3.2 | 52 | 2020-02-19 |
| 4 | 9NB1|1|Z+ 9NB1|1|Y | U7 small nuclear RNA + Histone 3' UTR stem-loop | modified H2a pre-mRNA, U7 snRNA | Homo sapiens | Eukarya | RF00066 + RF00032 | CRYO-EM STRUCTURE OF human U7 SNRNP WITH MUTANT LSM11 that disrupts contacts with CPSF73 | Electron microscopy | 3.85 | 58 | 2026-01-21 |
| 5 | 9N96|1|Z+ 9N96|1|Y | U7 small nuclear RNA + Histone 3' UTR stem-loop | modified H2a pre-mRNA, U7 snRNA | Homo sapiens | Eukarya | RF00066 + RF00032 | CRYO-EM STRUCTURE OF human U7 SM RING IN COMPLEX WITH SYMPLEKIN N-TERMINAL DOMAIN | Electron microscopy | 3.18 | 43 | 2026-01-21 |
Release history
| Release | 4.23 |
|---|---|
| Date | 2026-01-21 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9NH5|1|Z+ 9NH5|1|Y | CRYO-EM STRUCTURE OF HUMAN U7 SNRNP WITH METHYLATED noncleavable H2A* SUBSTRATE PRE-MRNA (core region) | ELECTRON MICROSCOPY | 2.82 | 49 | |
| 2 | 9NH6|1|Z+ 9NH6|1|Y | CRYO-EM STRUCTURE OF HUMAN U7 SNRNP WITH METHYLATED noncleavable H2A* SUBSTRATE PRE-MRNA (COMPOSITE MAP) | ELECTRON MICROSCOPY | 2.82 | 49 | |
| 3 | 6V4X|1|Z+ 6V4X|1|Y | Cryo-EM structure of an active human histone pre-mRNA 3'-end processing machinery at 3.2 Angstrom resolution | ELECTRON MICROSCOPY | 3.2 | 52 | |
| 4 | 9NB1|1|Z+ 9NB1|1|Y | CRYO-EM STRUCTURE OF human U7 SNRNP WITH MUTANT LSM11 that disrupts contacts with CPSF73 | ELECTRON MICROSCOPY | 3.85 | 58 | |
| 5 | 9N96|1|Z+ 9N96|1|Y | CRYO-EM STRUCTURE OF human U7 SM RING IN COMPLEX WITH SYMPLEKIN N-TERMINAL DOMAIN | ELECTRON MICROSCOPY | 3.18 | 43 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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