NR_4.0_10157.27

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	4U26\|1\|BB (rep)	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	119	2014-07-30
2	5MDW\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.06	120	2016-12-14
3	3J9Y\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	Electron microscopy	3.9	120	2015-04-15
4	5AFI\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	120	2015-03-11
5	5J88\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	120	2016-07-06
6	4U20\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	118	2014-07-30
7	4WWW\|1\|RB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	118	2014-12-24
8	4WF1\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	119	2014-11-05
9	4U27\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	119	2014-07-30
10	4U24\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	119	2014-07-30
11	4V6E\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	117	2014-07-09
12	4V6D\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	117	2014-07-09
13	5KCR\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution	Electron microscopy	3.6	120	2016-08-17
14	5H5U\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Mechanistic insights into the alternative translation termination by ArfA and RF2	Electron microscopy	3.01	120	2017-01-25
15	5LZE\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	Electron microscopy	3.5	120	2016-11-23
16	5J8A\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	120	2016-07-06
17	5J7L\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	120	2016-07-27
18	4YBB\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	120	2015-03-18
19	4V7T\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	118	2014-07-09
20	4V7V\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	118	2014-07-09
21	4V6D\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	118	2014-07-09
22	5J88\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	118	2016-07-06
23	4U1U\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	118	2014-07-30
24	4U25\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	119	2014-07-30
25	4U1U\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	119	2014-07-30
26	4U1V\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	119	2014-07-30
27	4V9C\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	119	2014-07-09
28	4V56\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	117	2014-07-09
29	4V56\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	117	2014-07-09
30	4V6C\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	117	2014-07-09
31	5MDY\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.35	120	2016-12-21
32	5GAG\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	RNC in complex with SRP-SR in the closed state	Electron microscopy	3.8	120	2016-01-27
33	5MGP\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	Electron microscopy	3.1	120	2016-12-14
34	5J5B\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	120	2016-07-27
35	5JC9\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	120	2016-07-06
36	5IT8\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	120	2016-07-27
37	5J91\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	120	2016-07-06
38	5IQR\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	118	2016-05-04
39	5JU8\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA	Electron microscopy	3.6	118	2016-07-20
40	4V6C\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	118	2014-07-09
41	4V7S\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	118	2014-07-09
42	5J7L\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	118	2016-07-27
43	4U20\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	119	2014-07-30
44	4V9D\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	119	2014-07-09
45	4V55\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	117	2014-07-09
46	4V50\|1\|BA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	117	2014-07-09
47	4V54\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	117	2014-07-09
48	4V54\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	117	2014-07-09
49	4V50\|1\|DA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	117	2014-07-09
50	4V55\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	117	2014-07-09
51	4V7S\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	117	2014-07-09
52	5UYM\|1\|02	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	Electron microscopy	3.2	120	2017-06-07
53	5KPX\|1\|28	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	Electron microscopy	3.9	120	2016-09-28
54	5MDZ\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S ribosome (empty A site)	Electron microscopy	3.1	120	2016-12-14
55	5GAH\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	RNC in complex with SRP with detached NG domain	Electron microscopy	3.8	120	2016-01-27
56	5LZD\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	Electron microscopy	3.4	120	2016-11-23
57	5GAD\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	RNC-SRP-SR complex early state	Electron microscopy	3.7	120	2016-01-27
58	3J9Z\|1\|LB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	Electron microscopy	3.6	120	2015-07-01
59	4V6E\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	118	2014-07-09
60	4V7U\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	118	2014-07-09
61	4V9P\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
62	5J8A\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	118	2016-07-06
63	5IT8\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	118	2016-07-27
64	5J91\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	118	2016-07-06
65	4YBB\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	118	2015-03-18
66	5J5B\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	118	2016-07-27
67	4U27\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	118	2014-07-30
68	4V9D\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	118	2014-07-09
69	4WF1\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	118	2014-11-05
70	4U25\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	118	2014-07-30
71	4WOI\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	119	2015-08-05
72	4V64\|1\|BA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	117	2014-07-09
73	4V64\|1\|DA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	117	2014-07-09
74	4V7T\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	117	2014-07-09
75	5KPW\|1\|28	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	Electron microscopy	3.9	120	2016-09-28
76	5KPS\|1\|29	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)	Electron microscopy	3.9	120	2016-09-28
77	5MDV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	120	2016-12-14
78	5GAE\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	RNC in complex with a translocating SecYEG	Electron microscopy	3.33	120	2016-01-27
79	4V9O\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
80	3J7Z\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the E. coli 50S subunit with ErmCL nascent chain	Electron microscopy	3.9	118	2014-10-22
81	4UY8\|1\|B	5S ribosomal RNA	RRNA-5S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00001	Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome	Electron microscopy	3.8	118	2014-10-29
82	5JTE\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA	Electron microscopy	3.6	118	2016-07-20
83	4WOI\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	118	2015-08-05
84	5JC9\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	118	2016-07-06
85	4U24\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	118	2014-07-30
86	4U1V\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	118	2014-07-30
87	4V57\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	117	2014-07-09
88	4V4Q\|1\|BA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	117	2014-07-09
89	4V53\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	117	2014-07-09
90	4V52\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	117	2014-07-09
91	4V4H\|1\|BA	5S ribosomal RNA	5S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	117	2014-07-09
92	4V4Q\|1\|DA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	117	2014-07-09
93	4V4H\|1\|DA	5S ribosomal RNA	5S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	117	2014-07-09
94	4V53\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	117	2014-07-09
95	4V52\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	117	2014-07-09
96	4V57\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	117	2014-07-09
97	5UYQ\|1\|02	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)	Electron microscopy	3.8	120	2017-06-07
98	3JA1\|1\|LB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	Electron microscopy	3.6	120	2015-07-01
99	4V85\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-ray diffraction	3.2	118	2014-07-09
100	4V9O\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
101	4U26\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	118	2014-07-30
102	4V7V\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	117	2014-07-09
103	4WWW\|1\|YB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	117	2014-12-24
104	5LZA\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)	Electron microscopy	3.6	120	2016-11-23
105	4V9P\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
106	4V9P\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
107	5U9G\|1\|02	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	Electron microscopy	3.2	119	2017-03-22
108	3JCJ\|1\|0	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	Electron microscopy	3.7	118	2016-03-09
109	3JCD\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	Electron microscopy	3.7	118	2016-01-13
110	4V9O\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
111	4V89\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-ray diffraction	3.7	118	2014-07-09
112	5U9F\|1\|02	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	Electron microscopy	3.2	119	2017-03-22
113	5UYK\|1\|02	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	Electron microscopy	3.9	120	2017-06-07
114	3JCE\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	118	2016-01-13
115	5U4I\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.5	118	2017-01-11
116	4V9O\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
117	4V9P\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	118	2014-07-09
118	5UYN\|1\|02	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)	Electron microscopy	4	120	2017-06-07
119	5UYP\|1\|02	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)	Electron microscopy	3.9	120	2017-06-07
120	5KCS\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution	Electron microscopy	3.9	120	2016-08-17
121	4V7U\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	117	2014-07-09
122	3JBV\|1\|a	5S ribosomal RNA	RNA (118-MER)	Escherichia coli	Bacteria	RF00001	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.32	117	2016-01-27
123	5L3P\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	Electron microscopy	3.7	120	2016-07-20
124	3JBU\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.64	118	2016-01-27
125	4V9C\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	118	2014-07-09
126	4V5B\|1\|AA	5S ribosomal RNA	5S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00001	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	117	2014-07-09
127	4V5B\|1\|CA	5S ribosomal RNA	5S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00001	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	117	2014-07-09

Release history

Release	2.131
Date	2017-06-11

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_10157.27	NR_4.0_10157.26	2.131	(122) 3J7Z\|1\|B, 3J9Y\|1\|B, 3J9Z\|1\|LB, 3JA1\|1\|LB, 3JBU\|1\|a, 3JBV\|1\|a, 3JCD\|1\|B, 3JCE\|1\|B, 3JCJ\|1\|0, 4U1U\|1\|BB, 4U1U\|1\|DB, 4U1V\|1\|BB, 4U1V\|1\|DB, 4U20\|1\|BB, 4U20\|1\|DB, 4U24\|1\|BB, 4U24\|1\|DB, 4U25\|1\|BB, 4U25\|1\|DB, 4U26\|1\|BB, 4U26\|1\|DB, 4U27\|1\|BB, 4U27\|1\|DB, 4UY8\|1\|B, 4V4H\|1\|BA, 4V4H\|1\|DA, 4V4Q\|1\|BA, 4V4Q\|1\|DA, 4V50\|1\|BA, 4V50\|1\|DA, 4V52\|1\|BA, 4V52\|1\|DA, 4V53\|1\|BA, 4V53\|1\|DA, 4V54\|1\|BA, 4V54\|1\|DA, 4V55\|1\|BA, 4V55\|1\|DA, 4V56\|1\|BA, 4V56\|1\|DA, 4V57\|1\|BA, 4V57\|1\|DA, 4V5B\|1\|AA, 4V5B\|1\|CA, 4V64\|1\|BA, 4V64\|1\|DA, 4V6C\|1\|BB, 4V6C\|1\|DB, 4V6D\|1\|BB, 4V6D\|1\|DB, 4V6E\|1\|BB, 4V6E\|1\|DB, 4V7S\|1\|BB, 4V7S\|1\|DB, 4V7T\|1\|BB, 4V7T\|1\|DB, 4V7U\|1\|BB, 4V7U\|1\|DB, 4V7V\|1\|BB, 4V7V\|1\|DB, 4V85\|1\|BB, 4V89\|1\|BB, 4V9C\|1\|BB, 4V9C\|1\|DB, 4V9D\|1\|CB, 4V9D\|1\|DB, 4V9O\|1\|AB, 4V9O\|1\|CB, 4V9O\|1\|EB, 4V9O\|1\|GB, 4V9P\|1\|AB, 4V9P\|1\|CB, 4V9P\|1\|EB, 4V9P\|1\|GB, 4WF1\|1\|BB, 4WF1\|1\|DB, 4WOI\|1\|BB, 4WOI\|1\|CB, 4WWW\|1\|RB, 4WWW\|1\|YB, 4YBB\|1\|CB, 4YBB\|1\|DB, 5AFI\|1\|B, 5GAD\|1\|B, 5GAE\|1\|B, 5GAG\|1\|B, 5GAH\|1\|B, 5H5U\|1\|B, 5IQR\|1\|3, 5IT8\|1\|CB, 5IT8\|1\|DB, 5J5B\|1\|CB, 5J5B\|1\|DB, 5J7L\|1\|CB, 5J7L\|1\|DB, 5J88\|1\|CB, 5J88\|1\|DB, 5J8A\|1\|CB, 5J8A\|1\|DB, 5J91\|1\|CB, 5J91\|1\|DB, 5JC9\|1\|CB, 5JC9\|1\|DB, 5JTE\|1\|BB, 5JU8\|1\|BB, 5KCR\|1\|1B, 5KCS\|1\|1B, 5KPS\|1\|29, 5KPW\|1\|28, 5KPX\|1\|28, 5L3P\|1\|B, 5LZA\|1\|B, 5LZD\|1\|B, 5LZE\|1\|B, 5MDV\|1\|3, 5MDW\|1\|3, 5MDY\|1\|3, 5MDZ\|1\|3, 5MGP\|1\|B, 5U4I\|1\|B, 5U9F\|1\|02, 5U9G\|1\|02	(5) 5UYK\|1\|02, 5UYM\|1\|02, 5UYN\|1\|02, 5UYP\|1\|02, 5UYQ\|1\|02	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_4.0_10157.27	NR_4.0_10157.28	2.132	(127) 3J7Z\|1\|B, 3J9Y\|1\|B, 3J9Z\|1\|LB, 3JA1\|1\|LB, 3JBU\|1\|a, 3JBV\|1\|a, 3JCD\|1\|B, 3JCE\|1\|B, 3JCJ\|1\|0, 4U1U\|1\|BB, 4U1U\|1\|DB, 4U1V\|1\|BB, 4U1V\|1\|DB, 4U20\|1\|BB, 4U20\|1\|DB, 4U24\|1\|BB, 4U24\|1\|DB, 4U25\|1\|BB, 4U25\|1\|DB, 4U26\|1\|BB, 4U26\|1\|DB, 4U27\|1\|BB, 4U27\|1\|DB, 4UY8\|1\|B, 4V4H\|1\|BA, 4V4H\|1\|DA, 4V4Q\|1\|BA, 4V4Q\|1\|DA, 4V50\|1\|BA, 4V50\|1\|DA, 4V52\|1\|BA, 4V52\|1\|DA, 4V53\|1\|BA, 4V53\|1\|DA, 4V54\|1\|BA, 4V54\|1\|DA, 4V55\|1\|BA, 4V55\|1\|DA, 4V56\|1\|BA, 4V56\|1\|DA, 4V57\|1\|BA, 4V57\|1\|DA, 4V5B\|1\|AA, 4V5B\|1\|CA, 4V64\|1\|BA, 4V64\|1\|DA, 4V6C\|1\|BB, 4V6C\|1\|DB, 4V6D\|1\|BB, 4V6D\|1\|DB, 4V6E\|1\|BB, 4V6E\|1\|DB, 4V7S\|1\|BB, 4V7S\|1\|DB, 4V7T\|1\|BB, 4V7T\|1\|DB, 4V7U\|1\|BB, 4V7U\|1\|DB, 4V7V\|1\|BB, 4V7V\|1\|DB, 4V85\|1\|BB, 4V89\|1\|BB, 4V9C\|1\|BB, 4V9C\|1\|DB, 4V9D\|1\|CB, 4V9D\|1\|DB, 4V9O\|1\|AB, 4V9O\|1\|CB, 4V9O\|1\|EB, 4V9O\|1\|GB, 4V9P\|1\|AB, 4V9P\|1\|CB, 4V9P\|1\|EB, 4V9P\|1\|GB, 4WF1\|1\|BB, 4WF1\|1\|DB, 4WOI\|1\|BB, 4WOI\|1\|CB, 4WWW\|1\|RB, 4WWW\|1\|YB, 4YBB\|1\|CB, 4YBB\|1\|DB, 5AFI\|1\|B, 5GAD\|1\|B, 5GAE\|1\|B, 5GAG\|1\|B, 5GAH\|1\|B, 5H5U\|1\|B, 5IQR\|1\|3, 5IT8\|1\|CB, 5IT8\|1\|DB, 5J5B\|1\|CB, 5J5B\|1\|DB, 5J7L\|1\|CB, 5J7L\|1\|DB, 5J88\|1\|CB, 5J88\|1\|DB, 5J8A\|1\|CB, 5J8A\|1\|DB, 5J91\|1\|CB, 5J91\|1\|DB, 5JC9\|1\|CB, 5JC9\|1\|DB, 5JTE\|1\|BB, 5JU8\|1\|BB, 5KCR\|1\|1B, 5KCS\|1\|1B, 5KPS\|1\|29, 5KPW\|1\|28, 5KPX\|1\|28, 5L3P\|1\|B, 5LZA\|1\|B, 5LZD\|1\|B, 5LZE\|1\|B, 5MDV\|1\|3, 5MDW\|1\|3, 5MDY\|1\|3, 5MDZ\|1\|3, 5MGP\|1\|B, 5U4I\|1\|B, 5U9F\|1\|02, 5U9G\|1\|02, 5UYK\|1\|02, 5UYM\|1\|02, 5UYN\|1\|02, 5UYP\|1\|02, 5UYQ\|1\|02	(0)	(2) 5NP6\|1\|Z, 5UYL\|1\|02

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	5U4I\|1\|B	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.5	118
2	3JCD\|1\|B	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	ELECTRON MICROSCOPY	3.7	118
3	3JCE\|1\|B	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	118
4	5H5U\|1\|B	Mechanistic insights into the alternative translation termination by ArfA and RF2	ELECTRON MICROSCOPY	3.01	120
5	5LZD\|1\|B	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	ELECTRON MICROSCOPY	3.4	120
6	5GAG\|1\|B	RNC in complex with SRP-SR in the closed state	ELECTRON MICROSCOPY	3.8	120
7	5GAH\|1\|B	RNC in complex with SRP with detached NG domain	ELECTRON MICROSCOPY	3.8	120
8	5GAD\|1\|B	RNC-SRP-SR complex early state	ELECTRON MICROSCOPY	3.7	120
9	5LZE\|1\|B	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	ELECTRON MICROSCOPY	3.5	120
10	5LZA\|1\|B	Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)	ELECTRON MICROSCOPY	3.6	120
11	5U9G\|1\|02	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	ELECTRON MICROSCOPY	3.2	119
12	5U9F\|1\|02	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	ELECTRON MICROSCOPY	3.2	119
13	5L3P\|1\|B	Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	ELECTRON MICROSCOPY	3.7	120
14	5KCS\|1\|1B	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution	ELECTRON MICROSCOPY	3.9	120
15	3J9Y\|1\|B	Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	ELECTRON MICROSCOPY	3.9	120
16	5AFI\|1\|B	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	120
17	5MGP\|1\|B	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	ELECTRON MICROSCOPY	3.1	120
18	5UYM\|1\|02	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	ELECTRON MICROSCOPY	3.2	120
19	5UYN\|1\|02	70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)	ELECTRON MICROSCOPY	4	120
20	5UYK\|1\|02	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	ELECTRON MICROSCOPY	3.9	120
21	5UYP\|1\|02	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)	ELECTRON MICROSCOPY	3.9	120
22	5UYQ\|1\|02	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)	ELECTRON MICROSCOPY	3.8	120
23	5KPS\|1\|29	Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)	ELECTRON MICROSCOPY	3.9	120
24	5KPX\|1\|28	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	ELECTRON MICROSCOPY	3.9	120
25	5KPW\|1\|28	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	ELECTRON MICROSCOPY	3.9	120
26	5GAE\|1\|B	RNC in complex with a translocating SecYEG	ELECTRON MICROSCOPY	3.33	120
27	3JCJ\|1\|0	Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	ELECTRON MICROSCOPY	3.7	118
28	4V9O\|1\|CB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
29	4V9O\|1\|AB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
30	4UY8\|1\|B	Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome	ELECTRON MICROSCOPY	3.8	118
31	3J7Z\|1\|B	Structure of the E. coli 50S subunit with ErmCL nascent chain	ELECTRON MICROSCOPY	3.9	118
32	4V9P\|1\|CB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
33	4V9P\|1\|AB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
34	4V89\|1\|BB	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-RAY DIFFRACTION	3.7	118
35	4V85\|1\|BB	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-RAY DIFFRACTION	3.2	118
36	4V6D\|1\|BB	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	118
37	4V6E\|1\|BB	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	118
38	4WWW\|1\|RB	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	118
39	4V7S\|1\|BB	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	118
40	4V6C\|1\|BB	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	118
41	4V7T\|1\|BB	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	118
42	4V7V\|1\|BB	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	118
43	4V7U\|1\|BB	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	118
44	4U1V\|1\|BB	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	119
45	4U20\|1\|BB	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	119
46	4U1U\|1\|BB	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	119
47	4WF1\|1\|BB	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	119
48	4U27\|1\|BB	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	119
49	4U25\|1\|BB	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	119
50	4U24\|1\|BB	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	119
51	4U26\|1\|BB	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	119
52	4V9D\|1\|CB	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	119
53	4V9C\|1\|DB	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	119
54	4WOI\|1\|BB	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	119
55	5KCR\|1\|1B	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution	ELECTRON MICROSCOPY	3.6	120
56	4YBB\|1\|DB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	120
57	5J91\|1\|DB	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	120
58	5J5B\|1\|DB	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	120
59	5IT8\|1\|DB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	120
60	5J8A\|1\|DB	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	120
61	5J7L\|1\|DB	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	120
62	5JC9\|1\|DB	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	120
63	5J88\|1\|DB	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	120
64	5IQR\|1\|3	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	118
65	5MDY\|1\|3	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.35	120
66	5MDV\|1\|3	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	120
67	5MDZ\|1\|3	Structure of the 70S ribosome (empty A site)	ELECTRON MICROSCOPY	3.1	120
68	5MDW\|1\|3	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.06	120
69	4V9P\|1\|EB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
70	4V9O\|1\|EB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
71	4YBB\|1\|CB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	118
72	5JC9\|1\|CB	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	118
73	5J7L\|1\|CB	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	118
74	5J8A\|1\|CB	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	118
75	5J5B\|1\|CB	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	118
76	5J91\|1\|CB	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	118
77	5IT8\|1\|CB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	118
78	5J88\|1\|CB	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	118
79	5JU8\|1\|BB	Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA	ELECTRON MICROSCOPY	3.6	118
80	5JTE\|1\|BB	Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA	ELECTRON MICROSCOPY	3.6	118
81	4V9D\|1\|DB	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	118
82	4U1U\|1\|DB	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	118
83	4U20\|1\|DB	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	118
84	4U1V\|1\|DB	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	118
85	4WF1\|1\|DB	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	118
86	4U27\|1\|DB	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	118
87	4U25\|1\|DB	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	118
88	4U24\|1\|DB	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	118
89	4U26\|1\|DB	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	118
90	4V9C\|1\|BB	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	118
91	4WOI\|1\|CB	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	118
92	4V6D\|1\|DB	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	117
93	4V6E\|1\|DB	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	117
94	4V7U\|1\|DB	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	117
95	4V7V\|1\|DB	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	117
96	4V7T\|1\|DB	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	117
97	4V6C\|1\|DB	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	117
98	4V7S\|1\|DB	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	117
99	4WWW\|1\|YB	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	117
100	4V9P\|1\|GB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
101	4V9O\|1\|GB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
102	3J9Z\|1\|LB	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	ELECTRON MICROSCOPY	3.6	120
103	3JA1\|1\|LB	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	ELECTRON MICROSCOPY	3.6	120
104	4V50\|1\|DA	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	117
105	4V50\|1\|BA	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	117
106	4V54\|1\|BA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	117
107	4V64\|1\|BA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	117
108	4V55\|1\|BA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	117
109	4V53\|1\|BA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	117
110	4V52\|1\|BA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	117
111	4V57\|1\|BA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	117
112	4V57\|1\|DA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	117
113	4V52\|1\|DA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	117
114	4V54\|1\|DA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	117
115	4V55\|1\|DA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	117
116	4V53\|1\|DA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	117
117	4V64\|1\|DA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	117
118	4V56\|1\|DA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	117
119	4V56\|1\|BA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	117
120	4V4H\|1\|BA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	117
121	4V4Q\|1\|BA	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	117
122	4V5B\|1\|AA	Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	117
123	4V5B\|1\|CA	Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	117
124	4V4Q\|1\|DA	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	117
125	4V4H\|1\|DA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	117
126	3JBV\|1\|a	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.32	117
127	3JBU\|1\|a	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.64	118

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_4.0_10157.27 Obsolete

Release history

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