#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
19TJW|1|B (rep)Transfer RNAtRNA(leu)Escherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase mutant R178A, tRNA(leu) and the leucyl adenylate analog LeuAMS in the aminoacyl transfer stateX-ray diffraction2.235802026-08-05
29TJV|1|BTransfer RNAtRNA(leu)Escherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase mutant W177A, tRNA(leu) and the leucyl adenylate analog LeuAMS in the aminoacyl transfer stateX-ray diffraction2.277792026-08-05
39TJW|1|DTransfer RNAtRNA(leu)Escherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase mutant R178A, tRNA(leu) and the leucyl adenylate analog LeuAMS in the aminoacyl transfer stateX-ray diffraction2.235782026-08-05
43ZGZ|1|BTransfer RNATRNA-LEU UAA ISOACCEPTOREscherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and toxic moiety from agrocin 84 (TM84) in aminoacylation-like conformationX-ray diffraction2.4822013-01-30
59TJU|1|BTransfer RNAtRNA(leu)Escherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase bound to tRNA(leu) and Leucinol in the editing stateX-ray diffraction1.782802026-08-05
69TJV|1|DTransfer RNAtRNA(leu)Escherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase mutant W177A, tRNA(leu) and the leucyl adenylate analog LeuAMS in the aminoacyl transfer stateX-ray diffraction2.277772026-08-05
74AQ7|1|BTransfer RNAE. COLI TRNALEU UAA ISOACCEPTOREscherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformationX-ray diffraction2.5792012-06-13
84AS1|1|BTransfer RNATRNA-LEU5 (UAA ISOACEPTOR)Escherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole AN2679 in the editing conformationX-ray diffraction2.02832012-06-13
93ZGZ|1|ETransfer RNATRNA-LEU UAA ISOACCEPTOREscherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and toxic moiety from agrocin 84 (TM84) in aminoacylation-like conformationX-ray diffraction2.4802013-01-30
108POT|1|BTransfer RNAtRNA(leu)Escherichia coli K-12BacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole cmpd9 in the editing conformationX-ray diffraction2.149842024-06-12
114ARI|1|BTransfer RNATRNA-LEU5 (UAA ISOACEPTOR)Escherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole AN2679 in the editing conformationX-ray diffraction2.08802012-06-13
125OMW|1|BTransfer RNAL-leucyl-tRNAEscherichia coliBacteriaRF00005Mutant T252A of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformationX-ray diffraction2.6832017-11-15
134AQ7|1|ETransfer RNAE. COLI TRNALEU UAA ISOACCEPTOREscherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformationX-ray diffraction2.5772012-06-13
143ZJT|1|BTransfer RNATRNALEU5 UAA ISOACCEPTOREscherichia coliBacteriaRF00005Ternary complex of E.coli leucyl-tRNA synthetase, tRNA(Leu)574 and the benzoxaborole AN3017 in the editing conformationX-ray diffraction2.2832013-04-17
155OMW|1|ETransfer RNAL-leucyl-tRNAEscherichia coliBacteriaRF00005Mutant T252A of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformationX-ray diffraction2.6772017-11-15
164CQN|1|BTransfer RNAESCHERICHIA COLI TRNA-LEU UAA ISOACCEPTOREscherichia coliBacteriaRF00005Crystal structure of the E.coli LeuRS-tRNA complex with the non- cognate isoleucyl adenylate analogueX-ray diffraction2.5822014-07-02
173ZJU|1|BTransfer RNATRNALEU5 UAA ISOACCEPTOREscherichia coliBacteriaRF00005Ternary complex of E .coli leucyl-tRNA synthetase, tRNA(Leu) and the benzoxaborole AN3016 in the editing conformationX-ray diffraction2.4802013-04-17
185ON2|1|BTransfer RNAtRNA(leu)Escherichia coliBacteriaRF00005Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformationX-ray diffraction3.1852017-11-15
195ONH|1|BTransfer RNAL-leucyl-tRNA(Leu)Escherichia coliBacteriaRF00005Quaternary complex of wild type E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformationX-ray diffraction3.1822017-11-15
204ARC|1|BTransfer RNATRNA-LEU5 (UAA ISOACCEPTOR)Escherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucine in the editing conformationX-ray diffraction2712012-06-13
215ON2|1|ETransfer RNAtRNA(leu)Escherichia coliBacteriaRF00005Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformationX-ray diffraction3.1812017-11-15
225ONH|1|ETransfer RNAL-leucyl-tRNA(Leu)Escherichia coliBacteriaRF00005Quaternary complex of wild type E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformationX-ray diffraction3.1832017-11-15
235ON3|1|BTransfer RNAtRNA(leu)Escherichia coliBacteriaRF00005Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of leucine in the aminoacylation conformationX-ray diffraction3.1792017-11-15
249TJT|1|BTransfer RNAtRNA(leu)Escherichia coliBacteriaRF00005Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole cmpd6 in the pre-activation stateX-ray diffraction2.87822026-08-05
254CQN|1|ETransfer RNAESCHERICHIA COLI TRNA-LEU UAA ISOACCEPTOREscherichia coliBacteriaRF00005Crystal structure of the E.coli LeuRS-tRNA complex with the non- cognate isoleucyl adenylate analogueX-ray diffraction2.5792014-07-02
263ZJV|1|BTransfer RNATRNALEU5 UAA ISOACCEPTOREscherichia coliBacteriaRF00005Ternary complex of E .coli leucyl-tRNA synthetase, tRNA(Leu) and the benzoxaborole AN3213 in the editing conformationX-ray diffraction2.31852013-04-17
275ON3|1|ETransfer RNAtRNA(leu)Escherichia coliBacteriaRF00005Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of leucine in the aminoacylation conformationX-ray diffraction3.1792017-11-15
282NQP|1|FTransfer RNAtransfer RNARF00005Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-ray diffraction3.5712007-05-15

Release history

Release4.51
Date2026-08-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
14CQN|1|ECrystal structure of the E.coli LeuRS-tRNA complex with the non- cognate isoleucyl adenylate analogueX-RAY DIFFRACTION2.579
29TJV|1|DTernary complex of E. coli leucyl-tRNA synthetase mutant W177A, tRNA(leu) and the leucyl adenylate analog LeuAMS in the aminoacyl transfer stateX-RAY DIFFRACTION2.27777
39TJW|1|DTernary complex of E. coli leucyl-tRNA synthetase mutant R178A, tRNA(leu) and the leucyl adenylate analog LeuAMS in the aminoacyl transfer stateX-RAY DIFFRACTION2.23578
45OMW|1|EMutant T252A of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformationX-RAY DIFFRACTION2.677
54AQ7|1|ETernary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformationX-RAY DIFFRACTION2.577
65ONH|1|EQuaternary complex of wild type E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformationX-RAY DIFFRACTION3.183
75ON2|1|EQuaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformationX-RAY DIFFRACTION3.181
85ON3|1|EQuaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of leucine in the aminoacylation conformationX-RAY DIFFRACTION3.179
93ZGZ|1|ETernary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and toxic moiety from agrocin 84 (TM84) in aminoacylation-like conformationX-RAY DIFFRACTION2.480
103ZGZ|1|BTernary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and toxic moiety from agrocin 84 (TM84) in aminoacylation-like conformationX-RAY DIFFRACTION2.482
115ON3|1|BQuaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of leucine in the aminoacylation conformationX-RAY DIFFRACTION3.179
125ONH|1|BQuaternary complex of wild type E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformationX-RAY DIFFRACTION3.182
135ON2|1|BQuaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformationX-RAY DIFFRACTION3.185
144AQ7|1|BTernary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformationX-RAY DIFFRACTION2.579
155OMW|1|BMutant T252A of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformationX-RAY DIFFRACTION2.683
169TJW|1|BTernary complex of E. coli leucyl-tRNA synthetase mutant R178A, tRNA(leu) and the leucyl adenylate analog LeuAMS in the aminoacyl transfer stateX-RAY DIFFRACTION2.23580
179TJV|1|BTernary complex of E. coli leucyl-tRNA synthetase mutant W177A, tRNA(leu) and the leucyl adenylate analog LeuAMS in the aminoacyl transfer stateX-RAY DIFFRACTION2.27779
184CQN|1|BCrystal structure of the E.coli LeuRS-tRNA complex with the non- cognate isoleucyl adenylate analogueX-RAY DIFFRACTION2.582
192NQP|1|FCrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-RAY DIFFRACTION3.571
209TJU|1|BTernary complex of E. coli leucyl-tRNA synthetase bound to tRNA(leu) and Leucinol in the editing stateX-RAY DIFFRACTION1.78280
213ZJT|1|BTernary complex of E.coli leucyl-tRNA synthetase, tRNA(Leu)574 and the benzoxaborole AN3017 in the editing conformationX-RAY DIFFRACTION2.283
224ARC|1|BTernary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucine in the editing conformationX-RAY DIFFRACTION271
234ARI|1|BTernary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole AN2679 in the editing conformationX-RAY DIFFRACTION2.0880
243ZJU|1|BTernary complex of E .coli leucyl-tRNA synthetase, tRNA(Leu) and the benzoxaborole AN3016 in the editing conformationX-RAY DIFFRACTION2.480
254AS1|1|BTernary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole AN2679 in the editing conformationX-RAY DIFFRACTION2.0283
263ZJV|1|BTernary complex of E .coli leucyl-tRNA synthetase, tRNA(Leu) and the benzoxaborole AN3213 in the editing conformationX-RAY DIFFRACTION2.3185
279TJT|1|BTernary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole cmpd6 in the pre-activation stateX-RAY DIFFRACTION2.8782
288POT|1|BTernary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole cmpd9 in the editing conformationX-RAY DIFFRACTION2.14984

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2026 BGSU RNA group. Database contents are licensed under Creative Commons Attribution 4.0 International (CC BY 4.0). Page generated in 0.0649 s