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Equivalence class NR_4.0_13899.2 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
14WZJ|1|XXX (rep)U4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
24WZJ|1|VVU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
34WZJ|1|YYU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
44WZJ|1|VVVU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
54WZJ|1|YYYYU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
64WZJ|1|XXU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
74WZJ|1|VU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
84WZJ|1|XXXXU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
94WZJ|1|YYYU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
104WZJ|1|VVVVU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
114WZJ|1|XU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14
124WZJ|1|YU4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor.Homo sapiensSpliceosomal U4 snRNP core domainX-ray diffraction3.6682015-01-14

Release history

Release3.3783.3793.3803.3813.3823.3833.3843.3853.3863.3873.3883.3893.3903.3913.3923.3933.3943.3953.3963.3973.3983.399
Date2025-03-132025-03-192025-03-262025-04-022025-04-092025-04-162025-04-232025-04-302025-05-072025-05-142025-05-212025-05-282025-06-042025-06-112025-06-182025-06-252025-07-022025-07-092025-07-162025-07-232025-07-302025-08-06

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
14WZJ|1|YSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
24WZJ|1|XSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
34WZJ|1|VVSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
44WZJ|1|VVVVSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
54WZJ|1|XXXSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
64WZJ|1|YYSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
74WZJ|1|YYYYSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
84WZJ|1|XXXXSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
94WZJ|1|VVVSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
104WZJ|1|YYYSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
114WZJ|1|XXSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668
124WZJ|1|VSpliceosomal U4 snRNP core domainX-RAY DIFFRACTION3.668

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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