#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
14YCO|1|D (rep)Transfer RNAtRNApheEscherichia coliBacteriaRF00005E. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-ray diffraction2.1742015-04-22
24YCO|1|ETransfer RNAtRNApheEscherichia coliBacteriaRF00005E. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-ray diffraction2.1672015-04-22
34YCO|1|FTransfer RNAtRNApheEscherichia coliBacteriaRF00005E. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-ray diffraction2.1712015-04-22
43FOZ|1|CtRNA(Phe)Structure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe)X-ray diffraction2.5742009-01-20
54WOI|1|DWTransfer RNAMessenger RNA, Phenylalanine specific transfer RNA, tRNA-PheEscherichia coliBacteriaRF000054,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction3762015-08-05
65NDK|1|X1Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.95762017-12-13
74V9H|1|AVTransfer RNAmRNA, PE hybrid state tRNA PheEscherichia coliBacteriaRF00005Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-ray diffraction2.86742014-07-09
83L0U|1|ATransfer RNAUnmodified tRNAPheEscherichia coliBacteriaRF00005The crystal structure of unmodified tRNAPhe from Escherichia coliX-ray diffraction3732010-03-16
92ZM5|1|CTransfer RNAtRNA(Phe)Escherichia coliBacteriaRF00005Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-ray diffraction2.55742009-04-14
105NDK|1|X4Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.95762017-12-13
114V5R|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.1762014-07-09
124V9D|1|BVTransfer RNAmessenger RNA, phenylalanine specific transfer RNAEscherichia coliBacteriaRF00005Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction3762014-07-09
134V5R|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.1762014-07-09
146QNR|1|2KTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.1762019-06-19
154V5P|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.1762014-07-09
164V5P|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.1762014-07-09
172ZXU|1|CTransfer RNAtRNA(Phe)Escherichia coliBacteriaRF00005Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-ray diffraction2.75742009-05-26
187AZO|1|PSIBTransfer RNAPhe-tRNA, RNA (30-MER)Escherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.3762022-06-01
194V6F|1|CCTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.1762014-07-09
205NDJ|1|X1Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.15762018-05-02
217AZO|1|PSIATransfer RNAPhe-tRNA, RNA (30-MER)Escherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.3762022-06-01
226QNR|1|2LTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.1762019-06-19
235NDJ|1|X4Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.15762018-05-02
244WQU|1|BWTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.8762015-01-28
254V5S|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.1762014-07-09
268G2C|1|1wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.65742023-12-27
274W2E|1|wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.9762014-10-01
284V5Q|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.1762014-07-09
294WQF|1|BWTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.8762015-01-28
304V5S|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.1762014-07-09
314V5E|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.45762014-07-09
328G2B|1|1wTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.55732023-12-27
335J4B|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6742016-04-27
348G2C|1|2wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.65722023-12-27
356C5L|1|AVTransfer RNAE-site tRNA PHE OR P-site tRNA PHE (unmodified bases), mRNAEscherichia coliBacteriaRF00005Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-ray diffraction3.2762018-02-21
366CFJ|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8742018-03-07
374V5E|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.45762014-07-09
387RQ8|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.5742021-10-13
395W4K|1|1yTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7742017-08-30
408G2B|1|1yTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.55742023-12-27
414V5J|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.1762014-07-09
424V5Q|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.1762014-07-09
436XHY|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.6742020-12-23
445WIT|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6742018-02-14
456C5L|1|CVTransfer RNAE-site tRNA PHE OR P-site tRNA PHE (unmodified bases), mRNAEscherichia coliBacteriaRF00005Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-ray diffraction3.2762018-02-21
466CFJ|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8742018-03-07
478G2A|1|1wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45742023-12-27
488G2B|1|2wTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.55702023-12-27
496CFJ|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8722018-03-07
508G29|1|1wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.55742023-12-27
518EV7|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.89742023-08-09
525J4C|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8742016-04-27
535WIS|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7742018-02-14
545J4C|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8742016-04-27
554V6F|1|BCTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.1762014-07-09
566Y3G|1|FTransfer RNARNA (75-MER)Escherichia coliBacteriaRF00005Crystal structure of phenylalanine tRNA from Escherichia coliX-ray diffraction3.1752020-12-30
574WQU|1|DWTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.8762015-01-28
588EV7|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.89742023-08-09
594V5D|1|CVTransfer RNAMRNA, P AND A-SITE PHE-TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.5762014-07-09
606XHW|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.5742020-12-23
614V5D|1|AVTransfer RNAMRNA, P AND A-SITE PHE-TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.5762014-07-09
628CVK|1|1wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5742022-10-19
638G29|1|2wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.55722023-12-27
646CFJ|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8732018-03-07
655WIS|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7742018-02-14
664WT1|1|1KTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.05762015-06-10
677AZS|1|PSIATransfer RNAmRNA, Phe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.1762022-06-08
685J4B|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6742016-04-27
696XHV|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.4742020-12-23
705NDK|1|W1Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.95762017-12-13
717AZS|1|PSIBTransfer RNAmRNA, Phe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.1762022-06-08
726XHY|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.6722020-12-23
735J4C|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8722016-04-27
744V51|1|AWTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.8762014-07-09
754WQF|1|DWTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.8762015-01-28
765J4B|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6722016-04-27
774WT1|1|3KTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.05762015-06-10
788G2B|1|2yTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.55732023-12-27
794V5J|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.1762014-07-09
804V9C|1|AVTransfer RNAMessenger RNA, mRNA, Phenylalanine specific transfer RNA, tRNA-PheEscherichia coliBacteriaRF00005Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.3762014-07-09
818G2A|1|2wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45722023-12-27
827RQ9|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.6742021-10-13
835J4B|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6732016-04-27
847AZO|1|ESIBTransfer RNAPhe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.3762022-06-01
855J4C|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8732016-04-27
865W4K|1|1wTransfer RNAmRNA, tRNA, A-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7742017-08-30
877RQ8|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.5732021-10-13
885NDK|1|W4Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.95762017-12-13
898CVJ|1|1wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4742022-10-19
906ND5|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.6742019-03-20
914WOI|1|AXTransfer RNAMessenger RNA, Phenylalanine specific transfer RNA, tRNA-PheEscherichia coliBacteriaRF000054,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction3762015-08-05
928G2D|1|1wTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.7742023-12-27
934W2G|1|AWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.55742014-10-15
944WQR|1|3KTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.15762015-06-10
957AZO|1|ESIATransfer RNAPhe-tRNA, RNA (30-MER)Escherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.3762022-06-01
966XHW|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.5722020-12-23
978G2D|1|1yTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.7742023-12-27
985WIS|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7732018-02-14
995WIT|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6722018-02-14
1008EV6|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.946742023-08-09
1016XHV|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.4722020-12-23
1028CVK|1|2wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5722022-10-19
1035DOY|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.6742015-12-30
1045W4K|1|2yTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7732017-08-30
1052ZM5|1|DTransfer RNAtRNA(Phe)Escherichia coliBacteriaRF00005Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-ray diffraction2.55692009-04-14
1068CVL|1|1wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.3742022-10-19
1077RQ9|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.6732021-10-13
1088EV7|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.89722023-08-09
1094Y4P|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.5742015-03-18
1104V9D|1|AVTransfer RNAmessenger RNA, phenylalanine specific transfer RNAEscherichia coliBacteriaRF00005Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction3762014-07-09
1117RQ9|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.6722021-10-13
1124Z3S|1|1yTransfer RNAA/E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.65742015-06-03
1134WSD|1|1KTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.95762015-06-10
1147RQ8|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.5712021-10-13
1155DOY|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.6752015-12-30
1168CVJ|1|2wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4722022-10-19
1174WT1|1|3LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.05762015-06-10
1188EV7|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.89732023-08-09
1194V5S|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.1762014-07-09
1205DOY|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.6732015-12-30
1214V51|1|CWTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.8762014-07-09
1226ND5|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.6742019-03-20
1234W2I|1|AWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.7742014-10-15
1248CVL|1|2wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.3722022-10-19
1258G2D|1|2yTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.7732023-12-27
1264WSD|1|3LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.95762015-06-10
1274V6F|1|BDTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.1762014-07-09
1284W2I|1|CWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.7722014-10-15
1294Z3S|1|2yTransfer RNAA/E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.65732015-06-03
1304Z3S|1|1wTransfer RNAA/E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.65742015-06-03
1315W4K|1|2wTransfer RNAmRNA, tRNA, A-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7722017-08-30
1324WQR|1|3LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.15762015-06-10
1331VY4|1|AWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.6742014-08-20
1344V5S|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.1762014-07-09
1356ND5|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.6732019-03-20
1364WPO|1|BYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.8742015-01-28
1374Y4P|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.5732015-03-18
1387AZO|1|ASIBTransfer RNAPhe-tRNA, RNA (30-MER)Escherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.3762022-06-01
1398EV6|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.946732023-08-09
1407RQ9|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.6702021-10-13
1414WRO|1|1KTransfer RNARNA (30-MER), tRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.05742015-06-10
1428EV6|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.946742023-08-09
1434W2G|1|CWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.55722014-10-15
1444V5D|1|CWTransfer RNAE-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.5762014-07-09
1456UO1|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.95732019-11-27
1464V5L|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-ray diffraction3.1762014-07-09
1476UO1|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.95692019-11-27
1484WSD|1|3KTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.95752015-06-10
1494W2I|1|AYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.7742014-10-15
1504V5D|1|AWTransfer RNAE-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.5762014-07-09
1514W2F|1|AWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.4742014-10-15
1524Y4P|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.5742015-03-18
1535NDJ|1|W1Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.15762018-05-02
1544Z3S|1|2wTransfer RNAA/E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.65732015-06-03
1554WT1|1|1LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.05762015-06-10
1566UO1|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.95742019-11-27
1574W2I|1|CYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.7732014-10-15
1581VY4|1|AYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.6742014-08-20
1598G2D|1|2wTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.7722023-12-27
1604V5D|1|AYTransfer RNAMRNA, P AND A-SITE PHE-TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.5762014-07-09
1614V5E|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.45762014-07-09
1626QNR|1|1KTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.1762019-06-19
1635NDJ|1|W4Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.15762018-05-02
1644WZO|1|3KTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.3762015-06-10
1657AZO|1|ASIATransfer RNAPhe-tRNA, RNA (30-MER)Escherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.3762022-06-01
1664WPO|1|DYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.8732015-01-28
1674W2G|1|AYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.55742014-10-15
1684V5J|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.1762014-07-09
1696XHY|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.6742020-12-23
1704V5G|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-ray diffraction3.6762014-07-09
1716UO1|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.95712019-11-27
1725WIS|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7722018-02-14
1734V5G|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-ray diffraction3.6762014-07-09
1744V5D|1|CYTransfer RNAMRNA, P AND A-SITE PHE-TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.5762014-07-09
1756QNR|1|3LTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.1762019-06-19
1764V5J|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.1762014-07-09
1772ZXU|1|DTransfer RNAtRNA(Phe)Escherichia coliBacteriaRF00005Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-ray diffraction2.75692009-05-26
1784V5Q|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.1762014-07-09
1794V5Q|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.1762014-07-09
1806QNR|1|1LTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.1762019-06-19
1817RQ8|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.5692021-10-13
1824WQR|1|1KTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.15762015-06-10
1835NDK|1|V4Transfer RNAtRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.95762017-12-13
1844W2G|1|CYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.55732014-10-15
1858EV6|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.946722023-08-09
1864V6F|1|CDTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.1762014-07-09
1878G2C|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.65742023-12-27
1885NDJ|1|V4Transfer RNAtRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.15762018-05-02
1895WIT|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6742018-02-14
1906QNR|1|5KTransfer RNAE. coli tRNAPheEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.1762019-06-19
1914WZO|1|3LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.3762015-06-10
1926QNR|1|3KTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.1762019-06-19
1936ND5|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.6722019-03-20
1944V5G|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-ray diffraction3.6762014-07-09
1954W2F|1|AYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.4742014-10-15
1964Y4P|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.5722015-03-18
1971VY7|1|AYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.852014-08-20
1986C5L|1|CWTransfer RNAE-site tRNA PHE OR P-site tRNA PHE (unmodified bases)Escherichia coliBacteriaRF00005Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-ray diffraction3.2752018-02-21
1996C5L|1|AWTransfer RNAE-site tRNA PHE OR P-site tRNA PHE (unmodified bases)Escherichia coliBacteriaRF00005Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-ray diffraction3.2752018-02-21
2005DOY|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.6742015-12-30
2011VY5|1|AWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.55742014-08-20
2021VY4|1|CYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.6732014-08-20
2034V6F|1|CBTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.1762014-07-09
2045WIT|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6732018-02-14
2058G2A|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45742023-12-27
2064WSD|1|1LTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.95762015-06-10
2074WRO|1|3LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.05762015-06-10
2085NDK|1|V1Transfer RNAtRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.95762017-12-13
2094V5C|1|AWTransfer RNAE-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.3762014-07-09
2104V5G|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-ray diffraction3.6762014-07-09
2114W2F|1|CWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.4722014-10-15
2126XHV|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.4742020-12-23
2134WRO|1|1LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.05762015-06-10
2144V5P|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.1762014-07-09
2158G29|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.55742023-12-27
2166XHY|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.6732020-12-23
2178G2C|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.65732023-12-27
2184W2F|1|CYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.4732014-10-15
2194V5R|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.1762014-07-09
2206XHW|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.5742020-12-23
2214V5C|1|CYTransfer RNAA-SITE PHE-TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.3762014-07-09
2224WPO|1|BWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.8742015-01-28
2238G2A|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.45732023-12-27
2247AZS|1|ASIBTransfer RNAmRNA, Phe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.1762022-06-08
2257AZS|1|ESIATransfer RNAmRNA, Phe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.1762022-06-08
2264WRO|1|3KTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.05762015-06-10
2274V5R|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.1762014-07-09
2284V5C|1|AYTransfer RNAA-SITE PHE-TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.3762014-07-09
2297AZS|1|ESIBTransfer RNAPhe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.1762022-06-08
2304V6F|1|BBTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.1762014-07-09
2314V5P|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.1762014-07-09
2321VY7|1|CYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.852014-08-20
2338CVJ|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4742022-10-19
2345NDJ|1|V1Transfer RNAtRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.15762018-05-02
2351VY5|1|AYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.55742014-08-20
2364P6F|1|QWTransfer RNAE-Site tRNA-Phe or A-Site tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.6762014-10-01
2376XHW|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.5732020-12-23
2388G29|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.55732023-12-27
2391VY4|1|CWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.6722014-08-20
2407AZS|1|ASIATransfer RNAmRNA, Phe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.1762022-06-08
2414V5E|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.45762014-07-09
2427LH5|1|CWTransfer RNAE-Site tRNA Phe and A-site tRNA PheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-ray diffraction3.27762021-06-02
2438CVJ|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.4732022-10-19
2446UCQ|1|1yTransfer RNAP-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome recycling complexX-ray diffraction3.5742019-12-25
2456XHV|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.4732020-12-23
2467LH5|1|AWTransfer RNAE-Site tRNA Phe and A-site tRNA PheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-ray diffraction3.27762021-06-02
2474V97|1|AWTransfer RNAE-SITE TRNA PHE OR A-SITE tRNA PheEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.52762014-07-09
2484V4I|1|zTransfer RNAMRNA, P-site PHE-tRNAEscherichia coliBacteriaRF00005Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.X-ray diffraction3.71762014-07-09
2497AZO|1|TRNATransfer RNAPhe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.3732022-06-01
2508CVK|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5742022-10-19
2517AZS|1|TRNATransfer RNAPhe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.1732022-06-08
2524P6F|1|XWTransfer RNAE-Site tRNA-Phe or A-Site tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.6762014-10-01
2538CVK|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.5732022-10-19
2541VY5|1|CWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.55722014-08-20
2558CVL|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.3742022-10-19
2564V5C|1|CWTransfer RNAE-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.3762014-07-09
2571VY5|1|CYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.55732014-08-20
2586UCQ|1|1xTransfer RNAmRNA, P-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome recycling complexX-ray diffraction3.5742019-12-25
2594WQR|1|1LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.15762015-06-10
2608CVL|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.3732022-10-19
2614V9I|1|AWTransfer RNAE-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.3762014-07-09
2624V9I|1|CWTransfer RNAE-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.3762014-07-09
2634WPO|1|DWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.8722015-01-28
2644V97|1|CWTransfer RNAE-SITE TRNA PHE OR A-SITE tRNA PheEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.52762014-07-09
2654V5L|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-ray diffraction3.1762014-07-09
2664W2H|1|AYTransfer RNAE-site tRNA Acceptor StemEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.7182014-10-15
2674V9C|1|CVTransfer RNAMessenger RNA, mRNA, Phenylalanine specific transfer RNA, tRNA-PheEscherichia coliBacteriaRF00005Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.3762014-07-09
2684V8J|1|AWTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.9762014-07-09
2694WQU|1|BYTransfer RNAP-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.8742015-01-28
2704W2H|1|CYTransfer RNAE-site tRNA Acceptor StemEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.752014-10-15
2716UCQ|1|2yTransfer RNAP-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome recycling complexX-ray diffraction3.5742019-12-25
2724V8J|1|CWTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.9762014-07-09
2734W2E|1|xTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.9742014-10-01
2744WQU|1|DYTransfer RNAP-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.8732015-01-28
2754WQF|1|BYTransfer RNAP-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.8742015-01-28
2766UCQ|1|2xTransfer RNAmRNA, P-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome recycling complexX-ray diffraction3.5742019-12-25
2774WQF|1|DYTransfer RNAP-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.8732015-01-28
2788G6W|1|YTransfer RNAA-site oABZ-tRNAPhe, mRNAEscherichia coliBacteriaRF00005Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.02742023-04-05
2798AKN|1|XTransfer RNAmRNA, Phenylalanine-tRNAEscherichia coli BW25113BacteriaRF00005Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosomeElectron microscopy2.3762023-03-08
2807S1K|1|ATransfer RNAmRNA, tRNA(PHE)Escherichia coliBacteriaRF00005Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.42762022-01-19
2817S1I|1|ATransfer RNAmRNA, tRNA(PHE)Escherichia coliBacteriaRF00005Wild-type Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.48762022-03-02
2827S1G|1|ATransfer RNAmRNA, tRNA(PHE)Escherichia coliBacteriaRF00005wild-type Escherichia coli stalled ribosome with antibiotic linezolidElectron microscopy2.48762021-11-17
2837N1P|1|DtTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.33762021-07-14
2848G6X|1|YTransfer RNAA-site tRNA Phe, mRNAEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.31742023-03-22
2858G6Y|1|YTransfer RNAA-site tRNA Phe, mRNAEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheElectron microscopy2.09742023-04-05
2867N2U|1|DtTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationElectron microscopy2.53762021-07-14
2876YSS|1|wTransfer RNAmRNA, P-site tRNAPheEscherichia coliBacteriaRF00005Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy2.6762020-08-19
2887UG7|1|PtTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF0000570S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BElectron microscopy2.58762022-05-18
2896AZ1|1|2Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinElectron microscopy2.7762017-12-06
2908G5Z|1|AtTransfer RNAA-site tRNA Phe, mRNAEscherichia coliBacteriaRF00005mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)Electron microscopy2.64762023-04-19
2916AZ1|1|4Transfer RNAE-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinElectron microscopy2.7762017-12-06
2927N30|1|DtTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationElectron microscopy2.66762021-07-14
2937N31|1|DtTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Elongating 70S ribosome complex in a post-translocation (POST) conformationElectron microscopy2.69762021-07-14
2947N2C|1|DtTransfer RNAChains: mR, tRNAEscherichia coliBacteriaRF00005Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)Electron microscopy2.72762021-07-14
2958EKC|1|wTransfer RNAA-site phenylalanine tRNA, M-F-Stop mRNAEscherichia coliBacteriaRF00005Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAElectron microscopy2.7742022-12-07
2966WDE|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy3762020-07-01
2978CD1|1|DtTransfer RNAtRNAPseudomonas aeruginosa PAO1BacteriaRF0000570S-PHIKZ014Electron microscopy3762024-01-24
2988G61|1|AtTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)Electron microscopy2.94762023-04-19
2996ZJ3|1|S3Transfer RNAA-site tRNA, P-tRNAEuglena gracilisEukaryaRF00005Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilisElectron microscopy3.15762020-10-07
3006ZJ3|1|S4Transfer RNAE-tRNAEuglena gracilisEukaryaRF00005Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilisElectron microscopy3.15762020-10-07
3018SYL|1|wTransfer RNAM-F-Stop mRNA, phenylalanine tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsElectron microscopy2.9742023-08-09
3025AFI|1|yTransfer RNAA/T-site Phe-tRNAPhe, mRNAEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.9762015-03-11
3038SYL|1|yTransfer RNAphenylalanine tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsElectron microscopy2.9742023-08-09
3048G4S|1|iTransfer RNAA-site tRNAGiardia intestinalis assemblage AEukaryaRF0000540S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs.Electron microscopy3.14752024-01-31
3056ZJ3|1|S2Transfer RNAA-site tRNA, A-tRNAEuglena gracilisEukaryaRF00005Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilisElectron microscopy3.15762020-10-07
3066WDD|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.2762020-07-01
3075UYM|1|YTransfer RNAmRNA, Phe-tRNAPheEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.2762017-06-07
3085UQ8|1|zTransfer RNAE-site tRNA PheEscherichia coliBacteriaRF0000570S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)Electron microscopy3.2762018-03-07
3096WNW|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAElectron microscopy3.2762020-06-24
3105WDT|1|yTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy3762018-04-25
3115WFS|1|yTransfer RNAmRNA, Phe-tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy3762018-05-02
3126WDG|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.3762020-07-01
3136YSR|1|wTransfer RNAmRNA, P-site fMet-Phe-tRNA(Phe)Escherichia coliBacteriaRF00005Structure of the P+9 stalled ribosome complexElectron microscopy3.1762020-08-19
3147PJV|1|wTransfer RNAmRNA, P-site fMet-Phe-tRNA(Phe)Escherichia coli K-12BacteriaRF00005Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)Electron microscopy3.1762021-10-20
3157PJY|1|wTransfer RNAmRNA, P-site fMet-Phe-tRNA(Phe)Escherichia coli K-12BacteriaRF00005Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)Electron microscopy3.1762021-10-20
3167Q4K|1|D3Transfer RNAMsrDL mRNA, Phe-tRNA (E site)Escherichia coliBacteriaRF00005Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chainElectron microscopy3752022-11-16
3176WDF|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.3762020-07-01
3186VWL|1|5Transfer RNAtRNAPheEscherichia coliBacteriaRF0000570S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)Electron microscopy3.1762020-06-03
3195WE4|1|yTransfer RNAmRNA, Phe-tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.1762018-04-25
3207AC7|1|7Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Structure of accomodated trans-translation complex on E. Coli stalled ribosome.Electron microscopy3.08762021-08-18
3216YST|1|wTransfer RNAmRNA, P/E-site tRNAPheEscherichia coliBacteriaRF00005Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateElectron microscopy3.2762020-08-19
3226ZTO|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy3662020-09-23
3236ZTP|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy3662020-09-16
3246ZU1|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy3662020-09-16
3257ABZ|1|7Transfer RNAtRNA-PheEscherichia coli K-12BacteriaRF00005Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.21762021-08-18
3263JCE|1|6Transfer RNAmRNA, tRNAsynthetic constructSyntheticRF00005Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.2762016-01-13
3277QGN|1|ATransfer RNAA-site tRNAEscherichia coliBacteriaRF00005Structure of the SmrB-bound E. coli disome - stalled 70S ribosomeElectron microscopy3.37732022-04-27
3288QFS|1|BTransfer RNAtRNAEscherichia coli 'BL21-Gold(DE3)pLysS AGBacteriaRF00005Cryo-EM structure of SidH from Legionella pneumophilaElectron microscopy2.7612023-10-11
3296BU8|1|YTransfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF0000570S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.5762018-01-31
3305UQ7|1|zTransfer RNAE-site tRNA PheEscherichia coliBacteriaRF0000570S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)Electron microscopy3.5762018-03-07
3316WD5|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)Electron microscopy3.6762020-07-08
3326WD3|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)Electron microscopy3.6762020-07-08
3335UYL|1|YTransfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)Electron microscopy3.6762017-06-14
3346WDK|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)Electron microscopy3.6762020-07-08
3356WD2|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)Electron microscopy3.6762020-07-08
3366WDM|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)Electron microscopy3.6762020-07-01
3375IQR|1|4Transfer RNAE-site tRNA(Phe)Escherichia coliBacteriaRF00005Structure of RelA bound to the 70S ribosomeElectron microscopy3762016-05-04
3385WE6|1|yTransfer RNAmRNA, Phe-tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.4762018-04-25
3395WFK|1|yTransfer RNAmRNA, Phe-tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.4762018-05-02
3406VWM|1|5Transfer RNAtRNAPheEscherichia coliBacteriaRF0000570S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)Electron microscopy3.4762020-06-03
3416VWN|1|5Transfer RNAtRNAPheEscherichia coliBacteriaRF0000570S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)Electron microscopy3.4762020-06-03
3426WD8|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)Electron microscopy3.7762020-07-08
3436WD6|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)Electron microscopy3.7762020-07-08
3446WD9|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)Electron microscopy3.7762020-07-08
3456WDJ|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)Electron microscopy3.7762020-07-01
3466WDL|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)Electron microscopy3.7762020-07-01
3476WD4|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2)Electron microscopy3.7762020-07-08
3486WDA|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)Electron microscopy3.8762020-07-08
3496ZTM|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.3662020-09-16
3505WF0|1|yTransfer RNAPhe-tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)Electron microscopy3.6762018-05-02
3518QHC|1|BTransfer RNAt-RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGBacteriaRF00005Cryo-EM structure of SidH from Legionella pneumophila in complex with LubXElectron microscopy3.1612023-10-11
3526O9J|1|vTransfer RNAP-tRNAEscherichia coliBacteriaRF0000570S Elongation Competent RibosomeElectron microscopy3.9762019-05-29
3535UYK|1|YTransfer RNAtRNAPheEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)Electron microscopy3.9762017-06-07
3546YSU|1|wTransfer RNAP-site tRNAPhe, RNA (5'-R(P*AP*UP*GP*UP*UP*C)-3')Escherichia coliBacteriaRF00005Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy3.7762020-08-19
3555OT7|1|2Transfer RNAtRNA-PheEscherichia coliBacteriaRF00005Elongation factor G-ribosome complex captures in the absence of inhibitors.Electron microscopy3.8762018-02-14
3566WD7|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)Electron microscopy3.9752020-07-08
3578HL1|1|AETNTransfer RNAtRNA (76-MER)Sulfolobus acidocaldarius DSM 639ArchaeaRF00005Cryo-EM Structures and Translocation Mechanism of Crenarchaeota RibosomeElectron microscopy3.93762024-01-17
3588HL1|1|APTNTransfer RNAtRNA (76-MER)Sulfolobus acidocaldarius DSM 639ArchaeaRF00005Cryo-EM Structures and Translocation Mechanism of Crenarchaeota RibosomeElectron microscopy3.93762024-01-17
3595KPX|1|30Transfer RNAA-site tRNAPhe, mRNAEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.9762016-09-28
3605KPW|1|30Transfer RNAA-site tRNAPhe, mRNAEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.9762016-09-28
3616ZTJ|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.4662020-09-16
3626Q95|1|8Transfer RNAtRNA-PheEscherichia coliBacteriaRF00005Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosomeElectron microscopy3.7762019-02-27
3637QG8|1|ATransfer RNAA-site tRNAEscherichia coli K-12BacteriaRF00005Structure of the collided E. coli disome - VemP-stalled 70S ribosomeElectron microscopy3.97732022-03-16
3643JCE|1|9Transfer RNAtRNAsynthetic constructSyntheticRF00005Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.2762016-01-13
3656WDB|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)Electron microscopy4732020-07-01
3666WDI|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)Electron microscopy4732020-07-01
3676ZTL|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.5662020-09-16
3685IQR|1|6Transfer RNAA/T tRNA(Phe), mRNAEscherichia coliBacteriaRF00005Structure of RelA bound to the 70S ribosomeElectron microscopy3762016-05-04
3697PJW|1|wTransfer RNAmRNA, P-site fMet-Phe-tRNA(Phe)Escherichia coliBacteriaRF00005Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)Electron microscopy4762021-10-20
3706ZTN|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)Electron microscopy3.9662020-09-16
3713JCD|1|8Transfer RNAmRNA, tRNAsynthetic constructSyntheticRF00005Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.7762016-01-13
3726ZTN|1|AZTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)Electron microscopy3.9662020-09-16
3733JCD|1|9Transfer RNAtRNAsynthetic constructSyntheticRF00005Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.7762016-01-13
3743JBV|1|VTransfer RNARNA (5'-R(P*CP*UP*GP*GP*CP*CP*CP*UP*CP*AP*A)-3'), RNA (76-MER)Escherichia coliBacteriaRF00005Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.32762016-01-27

Release history

Release3.320
Date2024-01-31

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This classParent classesRelease idIntersectionAdded to this classOnly in parent

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
11VY7|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.85
21VY7|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.85
35UQ8|1|z70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)ELECTRON MICROSCOPY3.276
44W2H|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.75
52ZM5|1|CCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-RAY DIFFRACTION2.5574
62ZXU|1|CCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-RAY DIFFRACTION2.7574
72ZXU|1|DCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-RAY DIFFRACTION2.7569
82ZM5|1|DCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-RAY DIFFRACTION2.5569
93FOZ|1|CStructure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe)X-RAY DIFFRACTION2.574
104W2H|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.718
114W2F|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.474
125WIT|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.674
134Z3S|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6574
146CFJ|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.874
155J4C|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.874
165J4B|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.674
174Y4P|1|1yCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.574
186ND5|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.674
197RQ8|1|1yCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.574
205W4K|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.774
215WIS|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.774
225WIS|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.773
235W4K|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.773
246ND5|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.673
255DOY|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.674
267RQ9|1|1yCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.674
276XHV|1|1yCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.474
286XHY|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.674
296XHW|1|1yCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.574
308CVL|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.374
318CVJ|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.474
328CVK|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.574
338G2A|1|1yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4574
348G29|1|1yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5574
358G2C|1|1yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6574
368G2B|1|1yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5574
378G2D|1|1yCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.774
388EV6|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94674
398EV7|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8974
406UO1|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9574
416UCQ|1|2yCrystal structure of the Thermus thermophilus 70S ribosome recycling complexX-RAY DIFFRACTION3.574
426UCQ|1|1yCrystal structure of the Thermus thermophilus 70S ribosome recycling complexX-RAY DIFFRACTION3.574
434WPO|1|BYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.874
444WQU|1|BYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.874
454WQF|1|BYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.874
464W2E|1|xCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.974
471VY4|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.674
481VY5|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5574
494W2I|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.774
504W2G|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5574
514W2G|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5573
524W2I|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.773
531VY5|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5573
541VY4|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.673
554WQU|1|DYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.873
564WQF|1|DYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.873
574WPO|1|DYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.873
584Z3S|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6573
595DOY|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.673
604W2F|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.473
614Y4P|1|2yCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.573
625J4B|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.673
635J4C|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.873
646CFJ|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.873
655WIT|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.673
666UO1|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9573
676XHV|1|2yCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.473
686XHY|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.673
696XHW|1|2yCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.573
707RQ9|1|2yCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.673
717RQ8|1|2yCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.573
728CVJ|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.473
738CVK|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.573
748CVL|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.373
758G2C|1|2yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6573
768G2A|1|2yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4573
778G29|1|2yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5573
788G2B|1|2yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5573
798G2D|1|2yCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.773
808EV6|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94673
818EV7|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8973
828SYL|1|yCryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsELECTRON MICROSCOPY2.974
836Q95|1|8Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosomeELECTRON MICROSCOPY3.776
845UQ7|1|z70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)ELECTRON MICROSCOPY3.576
854P6F|1|XWCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.676
864V97|1|CWCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5276
874V8J|1|CWCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.976
884V5C|1|CWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
894V5D|1|AWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.576
904V5D|1|CWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.576
914V5C|1|AWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
924V8J|1|AWCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.976
934V97|1|AWCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5276
944P6F|1|QWCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.676
954V51|1|CWStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
964V51|1|AWStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
974V5E|1|CWInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
984V9I|1|AWCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.376
994V9I|1|CWCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.376
1006C5L|1|AWConformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-RAY DIFFRACTION3.275
1016C5L|1|CWConformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-RAY DIFFRACTION3.275
1024V5J|1|CWStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.176
1034V5J|1|AWStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.176
1044V5E|1|AWInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
1053JCE|1|9Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.276
1067LH5|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-RAY DIFFRACTION3.2776
1076UCQ|1|1xCrystal structure of the Thermus thermophilus 70S ribosome recycling complexX-RAY DIFFRACTION3.574
1086UCQ|1|2xCrystal structure of the Thermus thermophilus 70S ribosome recycling complexX-RAY DIFFRACTION3.574
1093JCE|1|6Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.276
1104V5Q|1|CWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
1114V5S|1|CWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
1124V5G|1|CWThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.676
1134V5G|1|AWThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.676
1144V5R|1|CWThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
1154V5R|1|AWThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
1164V5P|1|CWThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
1174V5P|1|AWThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
1184V5Q|1|AWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
1194V5S|1|AWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
1204V5L|1|AWThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.176
1215IQR|1|4Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY376
1227LH5|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-RAY DIFFRACTION3.2776
1236QNR|1|3L70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.176
1246QNR|1|3K70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.176
1258HL1|1|AETNCryo-EM Structures and Translocation Mechanism of Crenarchaeota RibosomeELECTRON MICROSCOPY3.9376
1267AZS|1|ESIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.176
1277AZO|1|ESIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.376
1284V6F|1|CDElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.176
1295NDJ|1|V1Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
1305NDK|1|V1Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
1315NDK|1|V4Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
1325NDJ|1|V4Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
1334WSD|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9575
1344WQR|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1576
1354WT1|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
1364WRO|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
1374WZO|1|3KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.376
1384WQR|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1576
1397AZS|1|ESIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.176
1407AZO|1|ESIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.376
1414V6F|1|BDElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.176
1424WT1|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
1434WSD|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9576
1444WRO|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
1454WZO|1|3LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.376
1463JCD|1|9Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.776
1476YST|1|wStructure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateELECTRON MICROSCOPY3.276
1486AZ1|1|4Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinELECTRON MICROSCOPY2.776
1496ZJ3|1|S4Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilisELECTRON MICROSCOPY3.1576
1504V5D|1|CYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.576
1514V5D|1|AYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.576
1524V5C|1|CYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
1534V5C|1|AYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
1548G4S|1|i40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs.ELECTRON MICROSCOPY3.1475
1558EV6|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94674
1568EV7|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8974
1578G2D|1|1wCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.774
1588G2B|1|1wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5573
1596UO1|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9569
1606UO1|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9571
1614W2I|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.774
1624WPO|1|BWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.874
1631VY4|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.674
1641VY5|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5574
1654W2F|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.474
1664W2G|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5574
1675WIT|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.674
1687RQ8|1|1wCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.571
1697RQ9|1|1wCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.672
1706ND5|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.674
1714Y4P|1|1wCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.574
1725WIS|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.774
1735J4B|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.674
1745J4C|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.874
1755W4K|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.774
1766CFJ|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.874
1776XHV|1|1wCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.474
1786XHY|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.674
1796XHW|1|1wCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.574
1808CVJ|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.474
1818CVK|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.574
1828CVL|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.374
1838G2C|1|1wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6574
1848G29|1|1wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5574
1858G2A|1|1wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4574
1868G29|1|2wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5572
1878G2A|1|2wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4572
1888G2C|1|2wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6572
1898CVL|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.372
1908CVK|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.572
1916XHY|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.672
1928CVJ|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.472
1936XHW|1|2wCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.572
1946XHV|1|2wCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.472
1957RQ9|1|2wCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.670
1967RQ8|1|2wCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.569
1975W4K|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.772
1985J4C|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
1995J4B|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
2005WIS|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.772
2014Y4P|1|2wCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
2026CFJ|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
2036ND5|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.672
2044W2F|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
2054W2G|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
2061VY5|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
2071VY4|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.672
2084WPO|1|DWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.872
2094W2I|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
2105WIT|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
2118G2B|1|2wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5570
2128EV6|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94672
2138EV7|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8972
2148G2D|1|2wCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.772
2155NDK|1|W1Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
2165NDJ|1|W1Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
2175NDJ|1|W4Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
2185NDK|1|W4Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
2194V6F|1|BBElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.176
2204V6F|1|CBElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.176
2214WRO|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0574
2224WQR|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1576
2234WSD|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9576
2244WT1|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
2254WT1|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
2264WSD|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9576
2274WRO|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
2284WQR|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1576
2297AZS|1|ASIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.176
2307AZO|1|ASIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.376
2316QNR|1|1K70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.176
2327AZS|1|ASIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.176
2337AZO|1|ASIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.376
2346QNR|1|1L70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.176
2355DOY|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.675
2365DOY|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.674
2374Z3S|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6573
2384Z3S|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6574
2398G6X|1|YStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.3174
2408G6Y|1|YStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheELECTRON MICROSCOPY2.0974
2418G6W|1|YStructure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.0274
2426AZ1|1|2Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinELECTRON MICROSCOPY2.776
2436ZJ3|1|S2Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilisELECTRON MICROSCOPY3.1576
2447ABZ|1|7Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.2176
2456VWM|1|570S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)ELECTRON MICROSCOPY3.476
2466VWN|1|570S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)ELECTRON MICROSCOPY3.476
2473JBV|1|VMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.3276
2486WDB|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)ELECTRON MICROSCOPY473
2496WDI|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)ELECTRON MICROSCOPY473
2506WNW|1|7Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAELECTRON MICROSCOPY3.276
2516WDD|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.276
2526WDJ|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)ELECTRON MICROSCOPY3.776
2536WDL|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)ELECTRON MICROSCOPY3.776
2546WDM|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)ELECTRON MICROSCOPY3.676
2556BU8|1|Y70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.576
2566WDK|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)ELECTRON MICROSCOPY3.676
2576WDE|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY376
2588SYL|1|wCryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsELECTRON MICROSCOPY2.974
2598EKC|1|wEscherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAELECTRON MICROSCOPY2.774
2608G61|1|AtmRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)ELECTRON MICROSCOPY2.9476
2616ZTL|1|AXE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.566
2626ZTJ|1|AXE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.466
2636ZTO|1|AXE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY366
2646ZTP|1|AXE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY366
2656ZU1|1|AXE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY366
2666ZTN|1|AXE. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)ELECTRON MICROSCOPY3.966
2676ZTM|1|AXE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.366
2686YSU|1|wStructure of the P+0 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY3.776
2697PJW|1|wStructure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)ELECTRON MICROSCOPY476
2707PJV|1|wStructure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)ELECTRON MICROSCOPY3.176
2716QNR|1|5K70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.176
2727AZO|1|TRNA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.373
2737AZS|1|TRNA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.173
2747UG7|1|Pt70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BELECTRON MICROSCOPY2.5876
2754V4I|1|zCrystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.X-RAY DIFFRACTION3.7176
2764W2E|1|wCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.976
2774WQU|1|DWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.876
2784WQF|1|DWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.876
2794WQF|1|BWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.876
2804WQU|1|BWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.876
2818AKN|1|XCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosomeELECTRON MICROSCOPY2.376
2828CD1|1|Dt70S-PHIKZ014ELECTRON MICROSCOPY376
2836YSR|1|wStructure of the P+9 stalled ribosome complexELECTRON MICROSCOPY3.176
2846YSS|1|wStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.676
2857PJY|1|wStructure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)ELECTRON MICROSCOPY3.176
2867N1P|1|DtElongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.3376
2873JCD|1|8Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.776
2887S1K|1|ACfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.4276
2897S1I|1|AWild-type Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.4876
2907S1G|1|Awild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.4876
2914WOI|1|DW4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION376
2924V9C|1|AVAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.376
2934V9D|1|BVStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION376
2946O9J|1|v70S Elongation Competent RibosomeELECTRON MICROSCOPY3.976
2957AZO|1|PSIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.376
2966QNR|1|2K70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.176
2977AZS|1|PSIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.176
2986QNR|1|2L70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.176
2997AZO|1|PSIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.376
3007AZS|1|PSIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.176
3015NDJ|1|X4Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
3025NDK|1|X4Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
3034V6F|1|BCElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.176
3044V6F|1|CCElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.176
3055NDJ|1|X1Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
3065NDK|1|X1Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
3077AC7|1|7Structure of accomodated trans-translation complex on E. Coli stalled ribosome.ELECTRON MICROSCOPY3.0876
3084V5Q|1|CVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
3094V5S|1|CVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
3104V5L|1|AVThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.176
3114V5S|1|AVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
3124V5Q|1|AVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
3134V5P|1|AVThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
3144V5P|1|CVThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
3154V5R|1|AVThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
3164V5R|1|CVThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
3174V5E|1|CVInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
3184V5E|1|AVInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
3196C5L|1|AVConformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-RAY DIFFRACTION3.276
3206C5L|1|CVConformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-RAY DIFFRACTION3.276
3214V5J|1|CVStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.176
3224V5J|1|AVStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.176
3234V5D|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.576
3244V5D|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.576
3254V5G|1|CVThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.676
3264V5G|1|AVThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.676
3278HL1|1|APTNCryo-EM Structures and Translocation Mechanism of Crenarchaeota RibosomeELECTRON MICROSCOPY3.9376
3286ZJ3|1|S3Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilisELECTRON MICROSCOPY3.1576
3296WDF|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.376
3306WDG|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.376
3314WOI|1|AX4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION376
3324V9C|1|CVAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.376
3336VWL|1|570S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)ELECTRON MICROSCOPY3.176
3344V9D|1|AVStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION376
3354V9H|1|AVCrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.8674
3365OT7|1|2Elongation factor G-ribosome complex captures in the absence of inhibitors.ELECTRON MICROSCOPY3.876
3377N30|1|DtElongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.6676
3387N2U|1|DtElongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.5376
3397N2C|1|DtElongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.7276
3406ZTN|1|AZE. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)ELECTRON MICROSCOPY3.966
3417N31|1|DtElongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.6976
3427Q4K|1|D3Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chainELECTRON MICROSCOPY375
3435UYK|1|Y70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.976
3445IQR|1|6Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY376
3455KPX|1|30Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.976
3465KPW|1|30Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.976
3476WD7|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)ELECTRON MICROSCOPY3.975
3486WD2|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)ELECTRON MICROSCOPY3.676
3496WD3|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)ELECTRON MICROSCOPY3.676
3506WD4|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2)ELECTRON MICROSCOPY3.776
3516WD5|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)ELECTRON MICROSCOPY3.676
3526WD6|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)ELECTRON MICROSCOPY3.776
3536WD8|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)ELECTRON MICROSCOPY3.776
3545UYL|1|Y70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.676
3556WDA|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)ELECTRON MICROSCOPY3.876
3566WD9|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)ELECTRON MICROSCOPY3.776
3575UYM|1|Y70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.276
3585AFI|1|y2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.976
3595WE6|1|y70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.476
3605WF0|1|y70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)ELECTRON MICROSCOPY3.676
3615WDT|1|y70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY376
3625WE4|1|y70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.176
3635WFS|1|y70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY376
3645WFK|1|y70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.476
3658G5Z|1|AtmRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)ELECTRON MICROSCOPY2.6476
3668QHC|1|BCryo-EM structure of SidH from Legionella pneumophila in complex with LubXELECTRON MICROSCOPY3.161
3678QFS|1|BCryo-EM structure of SidH from Legionella pneumophilaELECTRON MICROSCOPY2.761
3686Y3G|1|FCrystal structure of phenylalanine tRNA from Escherichia coliX-RAY DIFFRACTION3.175
3694YCO|1|FE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.171
3704YCO|1|DE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.174
3714YCO|1|EE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.167
3727QG8|1|AStructure of the collided E. coli disome - VemP-stalled 70S ribosomeELECTRON MICROSCOPY3.9773
3733L0U|1|AThe crystal structure of unmodified tRNAPhe from Escherichia coliX-RAY DIFFRACTION373
3747QGN|1|AStructure of the SmrB-bound E. coli disome - stalled 70S ribosomeELECTRON MICROSCOPY3.3773

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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