#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18PVL|1|C2 (rep)5.8S ribosomal RNA5.8S rRNAThermochaetoides thermophila DSM 1495EukaryaRF00002Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structureElectron microscopy2.192023-12-06
28PVK|1|C25.8S ribosomal RNA5.8S rRNAThermochaetoides thermophila DSM 1495EukaryaRF00002Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structureElectron microscopy2.552023-12-06
38PV8|1|C25.8S ribosomal RNA5.8S rRNAThermochaetoides thermophila DSM 1495EukaryaRF00002Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structureElectron microscopy2.912024-01-10
48ONZ|1|25.8S ribosomal RNA5.8S rRNAThermochaetoides thermophila DSM 1495EukaryaRF00002Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosomeElectron microscopy2.942024-02-21

Release history

Release3.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.3553.3563.3573.3583.359
Date2024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-022024-10-092024-10-162024-10-232024-10-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18PVL|1|C2Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structureELECTRON MICROSCOPY2.19156
28PVK|1|C2Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structureELECTRON MICROSCOPY2.55156
38PV8|1|C2Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structureELECTRON MICROSCOPY2.91150
48ONZ|1|2Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosomeELECTRON MICROSCOPY2.9459

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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